LOCUS       XM_047441690            9301 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens endogenous retrovirus group K member 5 Gag
            polyprotein-like (LOC124900476), mRNA.
ACCESSION   XM_047441690
VERSION     XM_047441690.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000022.11) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9301
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="22"
     gene            1..9301
                     /gene="LOC124900476"
                     /note="endogenous retrovirus group K member 5 Gag
                     polyprotein-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 186 long SRA
                     reads, 1 Protein, and 90% coverage of the annotated
                     genomic feature by RNAseq alignments, including 34 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:124900476"
     CDS             370..2241
                     /gene="LOC124900476"
                     /codon_start=1
                     /product="endogenous retrovirus group K member 5 Gag
                     polyprotein-like"
                     /protein_id="XP_047297646.1"
                     /db_xref="GeneID:124900476"
                     /translation="MGQTESKYASYLSFIKILLRRGGVRASTENLITLFQTIEQFCPW
                     FPEQGTLDLKDWEKIGKELKQANREGKIIPLTVWNDWAIIKATLEPFQTGEDIVSVSD
                     APKSCVTDCEEEAGTESQQGTESSHCKYVAESVMAQSTQNVDYSQLQEIIYPESSKLG
                     EGGPESLGPSEPKPRSPSTPPPVVQMPVTLQPQTQVRQAQTPRENQVERDRVSIPAMP
                     TQIQYPQYQPVENKTQPLVVYQYRLPTELQYRPPSEVQYRPQAVCPVPNSTAPYQQPT
                     AMASNSPATQDAALYPQPPTVRLNPTASRSGQGGALHAVIDEARKQGDLEAWRFLVIL
                     QLVQAGEETQVGAPARAETRCEPFTMKMLKDIKEGVKQYGSNSPYIRTLLDSIAHGNR
                     LTPYDWEILAKSSLSSSQYLQFKTWWIDGVQEQVRKNQATKPTVNIDADQLLGTGPNW
                     STINQQSVMQNEAIEQVRAICLRAWGKIQDPGTAFPINSIRQGSKEPYPDFVARLQDA
                     AQKSITDDNARKVIVELMAYENANPECQSAIKPLKGKVPAGVDVITEYVKACDGIGGA
                     MHKAMLMAQAMRGLTLGGQVRTFGKKCYNCGQIGHLKRSCPGLNKQNIINQAINSKK"
     polyA_site      9301
                     /gene="LOC124900476"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcggcgcggg tcctccatat gctgagcgcc ggtcccctgg gcccactttt ctttctctat
       61 actttgtctc tgttgtcttt cttttctcaa gtctctcgtt ccacctgagg agaaatgccc
      121 acagctgtgg aggcgcaggc cactccatct ggtgcccaac gtggatgctt ttctctaggg
      181 tgaagggact ctcgagtgtg gtcattgagg acaagtcaac gagagattcc cgagtacgtc
      241 tacagtgagc cttgtgggtg aaggtactct acagtgtggt cattgaggac aagttgacga
      301 gagagtccca agtacgtcca cggtcagcct tgcggtaagc ttgtgtgctt agaggaaccc
      361 agggtaacga tggggcaaac tgaaagtaaa tatgcctctt atctcagctt tattaaaatt
      421 cttttaagaa gagggggagt tagagcttct acagaaaatc taattacgct atttcaaaca
      481 atagaacaat tctgcccatg gtttccagaa cagggaactt tagatctaaa agattgggaa
      541 aaaattggca aagaattaaa acaagcaaat agggaaggta aaatcatccc acttacagta
      601 tggaatgatt gggccattat taaagcaact ttagaaccat ttcaaacagg agaagatatt
      661 gtttcagttt ctgatgcccc taaaagctgt gtaacagatt gtgaagaaga ggcagggaca
      721 gaatcccagc aaggaacgga aagttcacat tgtaaatatg tagcagagtc tgtaatggct
      781 cagtcaacgc aaaatgttga ctacagtcaa ttacaggaga taatataccc tgaatcatca
      841 aaattggggg aaggaggtcc agaatcattg gggccatcag agcctaaacc acgatcgcca
      901 tcaactcctc ctcccgtggt tcagatgcct gtaacattac aacctcaaac gcaggttaga
      961 caagcacaaa ccccaagaga aaatcaagta gaaagggaca gagtctctat cccggcaatg
     1021 ccaactcaga tacagtatcc acaatatcag ccggtagaaa ataagaccca accgctggta
     1081 gtttatcaat accggctgcc aaccgagctt cagtatcggc ctccttcaga ggttcaatac
     1141 agacctcaag cggtgtgtcc tgtgccaaat agcacggcac cataccagca acccacagcg
     1201 atggcgtcta attcaccagc aacacaggac gcggcgctgt atcctcagcc gcccactgtg
     1261 agacttaatc ctacagcatc acgtagtgga cagggtggtg cactgcatgc agtcattgat
     1321 gaagccagaa aacagggcga tcttgaggca tggcggttcc tggtaatttt acaactggta
     1381 caggccgggg aagagactca agtaggagcg cctgcccgag ctgagactag atgtgaacct
     1441 ttcaccatga aaatgttaaa agatataaag gaaggagtta aacaatatgg atccaactcc
     1501 ccttatataa gaacattatt agattccatt gctcatggaa atagacttac tccttatgac
     1561 tgggaaattt tggccaaatc ttccctttca tcctctcagt atctacagtt taaaacctgg
     1621 tggattgatg gagtacaaga acaggtacga aaaaatcagg ctactaagcc cactgttaat
     1681 atagacgcag accaattgtt aggaacaggt ccaaattgga gcaccattaa ccaacaatca
     1741 gtgatgcaga atgaggctat tgaacaagta agggctattt gcctcagggc ctggggaaaa
     1801 attcaggacc caggaacagc tttccctatt aattcaatta gacaaggctc taaagagcca
     1861 tatcctgact ttgtggcaag attacaagat gctgctcaaa agtctattac agatgacaat
     1921 gcccgaaaag ttattgtaga attaatggcc tatgaaaatg caaatccaga atgtcagtcg
     1981 gccataaagc cattaaaagg aaaagttcca gcaggagttg atgtaattac agaatatgtg
     2041 aaggcttgtg atgggattgg aggagctatg cataaggcaa tgctaatggc tcaagcaatg
     2101 agggggctca ctctaggagg acaagttaga acatttggga aaaaatgtta taattgtggt
     2161 caaatcggtc atctgaaaag gagttgccca ggcttaaata aacagaatat aataaatcaa
     2221 gctattaaca gcaaaaaata aaaagccatc tggcctgtgt ccaaaatgtg gaaaagcaaa
     2281 acattgggcc aatcaatgtc attctaaatt tgataaagat gggcaaccat tgtctggaaa
     2341 caggaagagg ggccagcctc aggcccccca acaaactggg gcattcccag ttaaactgtt
     2401 tgttcctcag ggttttcaag gacaacaacc cctacagaaa ataccaccac ttcagggagt
     2461 cagccaatta caacaatcca acagctgtcc cgcgccacag caggcagcac cgcagtagat
     2521 ttatgttcca cccaaatggt ctttttactc cctggaaagc ccccacaaaa gattcctaga
     2581 ggggtatatg gcccgctgcc agaagggagg gtaggccttt gagggagatc aagtctaaat
     2641 ttgaagggag tccaaattca tactggggta atttattcag attataaagg gggaattcag
     2701 ttagtgatca gctccactgt tccccggagt gccaatccag gtgatagaat tgctcaatta
     2761 ctgcttttgc cttatgttaa aattggggaa aacaaaaagg aaagaacagg agggtttgga
     2821 agtaccaacc ctgcaggaaa agctgcttat tgggctaatc aggtctcaga ggatagaccc
     2881 gtgtgtacag tcactattca gggaaagagt ttgaaggatt agtggatacc caggctgatg
     2941 tttctgtcat cggcataggt actgcctcag aagtgtatca aagtgccatg attttacatt
     3001 gtccaggatc tgataatcaa gaaagtacgg ttcagcctgt gatcacttca ttccaatcaa
     3061 tttatggggc cgagacttgt tacaacaatg gcatgcagag attactatcc cagcctccct
     3121 atacagcccc aggaataaaa aaatcatgac taaaatggga tagctcccta aaaagggact
     3181 aggaaagaag tcccaattga ggctgaaaaa aatcaaaaaa gaaaaggaat agggcatcct
     3241 ttttaggagc ggtcactgta gagcctccaa aacccattcc attaacttgg gggaaaaaaa
     3301 aacaactgta tggtaaatca gcagcgcttc caaaacaaaa actggaggct ttacatttat
     3361 tagcaaagaa acaattagaa aaaggacatt gagccttcat tttcgccttg gaattctgtt
     3421 tgtaattcag aaaaaatccg gcagatggcg tataatgccg taattcaacc catgggggct
     3481 ctcccacccc ggttgccctc tccagccatg gtccccttta attataattg atctgaagga
     3541 ttgctttttt accattcctc tggcaaaaca ggattttgaa aaatttgctt ttaccacacc
     3601 agcctaaata ataaagaacc agccaccagg tttcagtgga aagtattgcc tcagggaatg
     3661 cttaatagtt caactatttg tcagctcaag ctctgcaacc agttagagac aagttttcag
     3721 actgttacat cgttcactat gttgatattt tgtgtgctgc agaaacgaga gacaaattaa
     3781 ttgaccgtta cacatttctg cagacagagg ttgccaacgc gggactgaca ataacatctg
     3841 ataagattca aacctctact cctttccgtt acttgggaat gcaggtagag gaaaggaaaa
     3901 ttaaaccaca aaaaatagaa ataagaaaag acacattaaa agcattaaat gagtttcaaa
     3961 agttgctagg agatactaat tggatttgga gatattaatt ggatttggcc aactctaggc
     4021 attcctactt atgccatgtc aaatttgttc tctttcttaa gaggggactc ggaattaaat
     4081 agtgaaagaa cgttaactcc agaggcaact aaagaaatta aattaattga agaaaaaatt
     4141 cggtcagcac aagtaaatag aatagatcac ttggccccac tccaaatttt gatttttgct
     4201 actgcacatt ccctaacagg catcattgtt caaaatacag atcttgtgga gtggtccttc
     4261 cttcctcaca gtacaattaa gacttttaca ttgtacttgg atcaaatggc tacattaatt
     4321 ggtcagggaa gattatgaat aataacattg tgtggaaatg acccagataa aatcactgtt
     4381 cctttcaaca agcaacaggt tagacaagcc tttatcaatt ctggtgcatg gcagattggt
     4441 cttgccgatt ttgtgggaat tattgacaat cgttacccca aaacaaaaat cttccagttt
     4501 ttaaaattga ctacttggat tttacctaaa gttaccaaac ataagccttt aaaaaatgct
     4561 ctggcagtgt ttactgatgg ttccagcaat ggaaaagtgg cttacaccgg gccaaaagaa
     4621 tgagtcatca aaactcagta tcacttgact caaagagcag agttggttgc cgtcattaca
     4681 gtgttaacaa gattttaatc agtctattaa cattgtatca gattctgcat atgtagtaca
     4741 ggctacaaag gatattgaga gagccctaat caaatacatt atggatgatc agttaaaccc
     4801 gctgtttaat ttgttacaac aaaatgtaag aaaaagaaat ttcccatttt atattactca
     4861 tattcgagca cacactaatt taccagggcc tttaactaaa gcaaatgaac aagctgactt
     4921 gctagtatca tctgcattca tggaagcaca agaacttcat gccttgactc atgtaaatgc
     4981 aataggatta aaaaataaat ttgatatcac atggaaacag acaaaaaata ttgtacaaca
     5041 ttgcacccag tgtcagattc tacacctggc cactcaggag gcaagagtta atcccagagg
     5101 tctatgtcct aatgtgttat ggcaaatgga tgtcatgcac gtaccttcat ttggaaaatt
     5161 gtcatttgtc catgtgacag ttgatactta ttcacatttc atatgggcaa cctgccagac
     5221 aggagaaagt acttcccatg ttaaaagaca tttattatct tgttttcctg tcatgggagt
     5281 tccagaaaaa gttaaaacag acaatgggcc aggttactgt agtaaagcag ttcaaaaatt
     5341 cttaaatcag tggaaaatta cacatacaat aggaattctc tataattccc aaggacaggc
     5401 cataattgaa agaactaata gaacactcaa agctcaattg gttaaacaaa aaaaaggaaa
     5461 agacaggagt ataacactcc ccagatgcaa cttaatctag cactctatac tttaaatgtt
     5521 ttaaacattt atagaaatca gaccactacc tctgcagaac aacatcttac tggtaaaagg
     5581 aacagcccac atgaaggaaa actgatttgg tggaaagata ataaaaataa aacatgggaa
     5641 atggggaagg tgataacgtg ggggagaggt tttgcttgtg tttcaccagg agaaaatcag
     5701 cttcctgttt ggatacccac tagacattta aagttctaca atgaactcac tggagatgca
     5761 aagaaaagtg tggagatgga gacaccccaa tcgactcgcc aggtaaacaa aatggtgata
     5821 tcagaagaac agaaaaagtt gccttccatc aaggaagcag agttgccaat ataggcacaa
     5881 ttaaagaagc tgacacagtt agctaaaaaa aaaagcctag agaatacaaa ggtgacacca
     5941 actccagaga atatgctgct tgcagctctg atgattgtat caacggtggt aagtcttccc
     6001 aagtctgcag gagcagctgc agctaattat acttactggg cctatgtgcc tttcccaccc
     6061 ttaattcggg cagttacata gatggataat cctattgaag tagatgttaa taatagtgca
     6121 tgggtgcctg gccccacaga tgactgttgc cctgcccaac ctgaagaagg aatgatgatg
     6181 aatatttcca ttgggtatcc ttatcctcct gtttgcctag ggaaggcacc aggatgctta
     6241 atgcctacaa cccaaaattg gttggtagaa gtacctacag tcagtgctac cagtagattt
     6301 acttatcaca tggtaagtgg aatgtcacag ataaataatt tacaggaccc ttcttatcaa
     6361 agatcattac aatgtaggcc taaggggaag gcttgcccca aggaaattcc caaagaatca
     6421 aaaagcccag aagtcttagt ctgcggagaa tgtgtggctg atactgcagt gtagtacaaa
     6481 acaatgaatt ttgaactatg atagactggg tcccttgagg ccaattatat cataactgta
     6541 caggccagac tcattcatgt tcacaggccc catccatctg gcccattaat ccagcctatg
     6601 acggtgatgt aactgaaagg ctggaccagg tttatagaag gttagaatca ctctgtccaa
     6661 ggaaatgggg tgaaaaggga atttcatcac cttgaccaaa gttagtcctg ttactggtcc
     6721 tgaacatcca gaattaggaa gcttactgtg gcctcacacc acattagaat ttgttctgga
     6781 aatcaagcta taggaacaag agatcgtaag tcatattata ctatcaacct aaattccagt
     6841 ctgacaattc ctttgcaaaa ttgtgtaaaa ctcccttata ttgctagttg taggaaaaac
     6901 atagttatta aacctgattc ccaaaccata atctgtgaaa attgtggaat gtttacttgc
     6961 attgatttga cttttaattg gcagcaccgt attctactag gaagagcaag agagggtgtg
     7021 tggatccttg tgtccatgga ccgaccatgg gaggcttcgc tatccatcca tattttaacg
     7081 gaagtattaa aaggaattct aactagatcc aaaagattca tttttacttt gatggcagtg
     7141 attatgggcc tcattgcagt cacagctact gctgcggctg ctggaattgc tttacactcc
     7201 tctgttcaaa ctgcagaata cgtaaatgat tggcaaaaga attcctcaaa attgtggaat
     7261 tctcagatcc aaatagatca aaaattggca aaccaaatta atgatcttag acaaactgtc
     7321 atttggatgg gagaggctca tgagcttgga atatcttttt cagttacgat gtgactggaa
     7381 tacatcagat ttttgtgtta caccacaagc ctataatgag tctgagcatc actgggacat
     7441 ggttagatgc catctgcaag gaggagaaga taatcttact ttagacattt caaaattaaa
     7501 agaatttttt ttttctttga gacagagtct cgctctgtcg cccaggctgg agtgcagtgg
     7561 cgtgatctca gctcactgca agttccgcct cctgggttta caccattctc ctgcctcagc
     7621 ctcccaagta gttgggacta caggagccca ccaccatgcc tggctaattt tttttgggtt
     7681 tttaatagag atggagtttc accgtgttag ccaggatggt ctcgatctcc tgaccttgtg
     7741 atctgcccac cttggcctcc caaagtgctg ggattacagt cgtgagccac cgtgcccagc
     7801 caagaaaaaa tttttgaggc atcaaaagcc catttaaatt tggtgccagg aacggagaca
     7861 atcgtgaaag ctgctgatag cctcacaaat cttaagccag tcacttgggt taaaagcatc
     7921 agaagtttca ctattgtaaa tttcatatta atccttgtat gcctgttctg tctgttgtta
     7981 gtctacaggt gtatccagca gctccaaaga gacagcaacc agcaagaatg ggccatagtg
     8041 acgatggtgg ttttgtcaaa aagaaaaggg ggggatatgt aaggaaaaga gagatcagac
     8101 tttcactgtg tctatgtaga aaaggaagac ataagaaact ccattttgat ctgtactaag
     8161 aaaaattgtt ttgccttgag atgctgttaa tctgtaactt tagccccaac cctgtgctca
     8221 cggaaacatg tgctgtaagg tttaagggat ctagggctgt gcaggatgta ccttgttaac
     8281 aatatgtttg caggcagtat gtttggtaaa agtcatcgcc attctccatt ctcgattaac
     8341 caggggctca atgcactgtg gaaagccaca ggaacctctg cccaagaaag cctggctgtt
     8401 gtgggaagtc agggaccccg aatggaggga ccagctggtg ctgcatcagg aaacataaat
     8461 tgtgaagatt tcttggacat ttatcagttt ccaaaattaa tacttttata atttcttaca
     8521 cctgtcttac tttaatctct taatcctgtt atctttgtaa gctgaggata tacgtcacct
     8581 caggaccact attgtacaaa ttgattgtaa aacatgttca catgtgtttg aacaatatga
     8641 aatcagtgca ccttgaaaat gaacagaata acagtgattt tagggaacaa aggaagacaa
     8701 ccataaggtc tgactgcctg aggggtcggg caaaaagcca tatttttctt cttgcagaga
     8761 gcctataaat ggacgtgcaa gtaggagaga tattgctaaa ttcttttcct agcaaggaat
     8821 ataatactaa gaccctaggg aaagaattgc attcctgggg ggaggtctat aaacggccgc
     8881 tctgggagtg tctgtcctat gtggttgaga taaggactga gatacgccct ggtctcctgc
     8941 agtaccctca ggcttactag gattgggaaa ccccagtcct ggtaaatttg aggtcaggcc
     9001 ggttctttgc tctgaaccct gttttctgtt aagatgttta tcaagacaat acatgcaccg
     9061 ctgaacatag acccttatca ggagtttctg attttgctct ggtcctgttt cttcagaagc
     9121 atgtcatctt tgctctgcct tctgcccttt gaagcatgtg atctttgtga cctactccct
     9181 gttcatacac ccctcccctt ttaaaatccc taataaaaac ttgctggttt tgtggctcag
     9241 gggggcatca tggacctacc aatacgtgat gtcacccccg gtggcccagc tgtaaaattc
     9301 c
//
