LOCUS       XM_047439791            1404 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens collagen alpha-1(I) chain-like
            (LOC124900418), transcript variant X1, mRNA.
ACCESSION   XM_047439791
VERSION     XM_047439791.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000019.10) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
     gene            1..1404
                     /gene="LOC124900418"
                     /note="collagen alpha-1(I) chain-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 ESTs, 3 long SRA reads, and 86% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     4 samples with support for all annotated introns"
                     /db_xref="GeneID:124900418"
     CDS             460..1101
                     /gene="LOC124900418"
                     /codon_start=1
                     /product="collagen alpha-1(I) chain-like isoform X1"
                     /protein_id="XP_047295747.1"
                     /db_xref="GeneID:124900418"
                     /translation="MRGGKRSLQDLRPAQGGARLGDRVAETRLRTPFGRLREKRGPPS
                     GGKAGLGSPQAMAPPTGSPGRRRDPPMILPWPPHNLGRCGAAQRGLWGDSHCAGTGQD
                     SRSPSCRPSPTLRPRGPRAELLQGNSGPRPRSRSGQARVPPQPDPAGSTSSSSGLGTS
                     GPAHSAFPASGCPGVLPWACSRRRGAATGIRGEEGLREQQRPQTPKNKETARN"
     polyA_site      1404
                     /gene="LOC124900418"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaagtctaa aacgcttagg ctggcaacca tcagatcctt gcccatggtg tcctcaagcc
       61 tactctcatg aaatggacaa cagtacacgc atatggggcc agttccacat atttggcaac
      121 cagaccagca tccaggacaa cacaaagtat gttgtttgtt gttagagggc ttgggacatt
      181 tcactctttg ccagcctcag cttaatccag gagacaaaga ttattttcct tattatctct
      241 tctgcatagg atctgcaatc agaactattg aacttctcca ttcagaccgc cactcacacc
      301 tatgggaaaa gggtgacaga aaagaaatct tcctaaaaga gtcagccact gctctgtgga
      361 acgatgatca tttaaatgcc acgtcgattt gaaacgtaca acaaagggac taacagttga
      421 gaaccatgtg gattgcagtg gagacgctgg cgttagagaa tgcggggagg gaaacgttca
      481 ttacaagatt tacggccagc ccaaggggga gcgaggctgg gggaccgggt cgcggagacc
      541 cggcttcgca caccttttgg aagactcagg gagaagcggg ggccgccttc ggggggaaag
      601 gcgggactgg ggagcccaca ggccatggct cctcccacag gatccccagg ccggaggcgg
      661 gatcccccca tgatcctccc gtggcccccg cacaatctgg ggagatgcgg agctgcccag
      721 agagggctct ggggcgacag tcactgcgca gggacaggac aggactcccg gagtcccagc
      781 tgccggccca gccccaccct gcggccgaga ggaccgaggg ccgagctgct ccaggggaac
      841 tcgggtccca gaccccggag tcgcagcgga caggcccggg tcccgccaca gccagatccg
      901 gctggttcca ccagctcctc ctccggtctc gggacgtccg gccccgcaca ctcagcattt
      961 ccggcttccg ggtgtcccgg cgtcctcccc tgggcctgct cacgtcgcag aggggcggcg
     1021 acggggatta gaggggagga gggcctgcgc gagcagcaaa gaccccaaac cccaaaaaac
     1081 aaagaaaccg ccagaaactg aagcttccac agcccgccac gtcccccggc tacggctacg
     1141 ctcctgattg gatagttagt acggccccta gtgcccctga ttggataccg cttcaggtcc
     1201 cgccccctgg ggttagaaag acaggagacc cgagaagaca cttggctgcg tggagcccaa
     1261 atgggcggtt cctggcaact gggcttgttg tcttcctcgt gtcaggatgt aaaaagaaaa
     1321 gtagaggttc ttcttcaaag acttccttct tcatctaatt aagaataaat agtgtttgaa
     1381 atgcttggtt tttggtgcca taaa
//
