LOCUS       XM_047422516            3990 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens proline-rich proteoglycan 2-like
            (LOC124900251), transcript variant X1, mRNA.
ACCESSION   XM_047422516
VERSION     XM_047422516.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000008.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3990
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="8"
     gene            1..3990
                     /gene="LOC124900251"
                     /note="proline-rich proteoglycan 2-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 212 long SRA reads, and 91% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     8 samples with support for all annotated introns"
                     /db_xref="GeneID:124900251"
     CDS             123..863
                     /gene="LOC124900251"
                     /codon_start=1
                     /product="proline-rich proteoglycan 2-like"
                     /protein_id="XP_047278472.1"
                     /db_xref="GeneID:124900251"
                     /translation="MEGVLFFFFHLIYSITEPLQPLHAAHTRHSPWVREPEQRHSETG
                     WFRGLCRSTGKRRPGHTAPRTQQPKPSGPSSHPREPPLPGAVTGGSLHFQEPPPLGAA
                     TAGSRHRQKPPSPGSRHRWEPPPPGAATATGSRHRREPPSPGATTAGSCHLRSSGSTG
                     TRRAPSHPAALQVPYTREGPREPTPPAGPQGFAGSFCAEGSRRGAEVGWGKLEPQGTR
                     RTGSLGVDSSPLSETLGPAQCGSGRRRV"
     polyA_site      3990
                     /gene="LOC124900251"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtttatcatt ttaatgagag tagaataata aacagtctga aattttaagg agttacataa
       61 aaagcaatat agccttttcc tctttcgctt gctgtctccc cttcccctcc ttctttctcc
      121 aaatggaggg agttcttttt ttcttcttcc atctcatcta ctcaataacg gagccgctgc
      181 agccgctgca cgctgcacac acacggcaca gtccctgggt ccgggagcca gagcagcgcc
      241 actcggagac gggatggttc cgtgggttgt gtaggagcac aggaaagcgg aggccgggcc
      301 acacagcacc gcgaacccag cagcccaagc ccagcggacc aagcagccac ccccgggagc
      361 cgccactgcc tggagcagtc accggcggga gcctccattt ccaggagccg ccaccgctgg
      421 gagctgccac agccgggagc cgccaccgcc agaagcctcc atctcccggg agccgccatc
      481 gctgggagcc gccacctcca ggagccgcca cggccaccgg gagccgtcac cgcagggaac
      541 ctccatctcc tggagccacc accgctggga gctgccacct caggagcagc ggcagcactg
      601 ggacccgccg ggccccctcg cacccagcgg ctctgcaggt gccctacacc cgggaggggc
      661 cgagggagcc cacgccgccg gcgggaccgc agggatttgc tggctctttc tgcgctgagg
      721 ggtcgcggcg cggggcggag gtcgggtggg gaaagctgga gccgcaggga acgcgcagga
      781 caggctcgct gggtgtcgac tctagccctc tgtcagagac cttgggaccc gcgcaatgtg
      841 gcagtggaag gcgcagggtc tgaccccggc cgcggccgcc gcagcagctg atctgtcaac
      901 cccggccaga gccgagccgc ctgaggcctg cagtgttctc catcaccact gtgatggcat
      961 ccgcttccgt gactgtcact gtgcaccctc cgcctgtcct gggcccacgc aggaccccca
     1021 agcggggctc tgcacaggcc aggagggcta cccagggact gaccacgggt tgttcatggg
     1081 tcctcacctg cttttccagg tccagggtga gaggacgaat ttgaaggtag aagtcacaga
     1141 gttgcaggat gtggagtgcg aggagtggcc ccggggaagc agctccaact gagggtgatt
     1201 aaaatctgaa gcaggccggg cgcagtggct cacatctgta atcccagcac ttttggaggc
     1261 cgaggcaggt ggatcacctg acgtcaggag ttcgagacca gcctgggcaa catggtgaaa
     1321 ccccgtctct gctaaaaata caaagttagc caggcatgat ggcgagcgcc tgtaatccca
     1381 gctactaggg aggctgaggc acgagaatcg cttgaacctg ggagggggag gttgcagtca
     1441 cctgagattg gaccattgca ctccagcctg ggcaacaaga gcgaaactcc atctcagaaa
     1501 aaaaaaaaaa aaaaaaaaat ctaaagtaaa gaggtcaaag atcggaaacc cctgccccta
     1561 cacctttcaa gaactgcttg tgtctgtaac ccttagcagg ctctgaccta gtcaggctag
     1621 aagaagcata aggatctttt attgctttgt gctgggtgag ggctggccct aaacatctgc
     1681 ctaatccttt caacgggccc aggaaaagcc agactggcat catgtccaca gcatcgctta
     1741 atatcgttgg ttgtcatcca gacacctcaa cttgtgctgc agaggaaata agttccttct
     1801 cacggatcat catgatggat attgaaacct cagggtgcag aactaacacc tgttcatcat
     1861 cgtggatgtt aaagaattgg gtaacatgcc aagcggtaag ccttggatgg gccatgagaa
     1921 tatcctctaa aaagcacgca gtattgtgcc cctctcacaa ccaacacaca catgacctgt
     1981 cccctggcac ccccaaattt aagagtggat tgcaaatctt ttggagacca tggccctgct
     2041 acatgtagaa aaacctgttc tgctattcct gggcccacaa taaacccaga aattatgttt
     2101 tgagttactg tgatttaaac tccctctctt cttaaatgga acagctcatt ggggctttct
     2161 ggatctgttt ccatttttct ttaaaaataa attgtgagca tgcattgtgg tgatgcagag
     2221 gcaggcattc tgtgagatac aagctccaga aggattctcc tcaatgtgtc agtgttggga
     2281 tgcacacttc ctaaataaat catcattgtc tccgtcttct ccattaatag cgctctttca
     2341 gtgtgacatg gaaaagcagg atggcataca ccccactgaa ggatgtaggc ggaggcagat
     2401 ctctcaacca ggcatattgc ttctgtactg ctcttctttt gctctaaggt atgggttccc
     2461 tcaacctctt agctagagac cagcaaatgt cagggaagca cccggtgtct ggctcccctt
     2521 ccaaatcaac accagtgtct tgttacagac aagaagtcag aggaaagggc ggggtcccag
     2581 cagggcagaa gcctaagcta ctatgaggca ctcacaagtg gcagctcctg ttactccctc
     2641 ttaaattatg tgggaaatct taacggaagg gcaatgggcc ccaggaatac ctgcagcgta
     2701 gtgacctcag atcctgatac tcaccatgaa actctaagat actgattgga agcgacttgt
     2761 ggctgctggc tgtgtgtgtg actctgccgg ggaccctggc agcccccctg tagctgtctt
     2821 gatgcctctc tgtcacccac atcatctgcc tacttaacgc ccagctctgc tcagaaaacg
     2881 ttatgtcctg tgtcgaggag agacgacgca aaattctgaa gtccatttcc ctctggctcc
     2941 tggcataccc tcgctccttt tctgagccca gctcgtggtg tgccagagcc tgtgtggtcc
     3001 cctgacttct gcacagtgta gaactttctc caatagtcac aatggcaaag ggagaactgg
     3061 ggggctggca ggtaattaga atttctctcc ctctctcttt taatactttc attttgaatg
     3121 tcttatttgt tcatgtgtat gttttaactt aaaaaattct ttctgatatt tttaattttg
     3181 tgtcataaga atgttttcct ctacagtatt tgtcatacca gtttataacc acagaaatgc
     3241 agagatttta tttctattgg aaacattact acagctatgt tttacttttg aacagaattt
     3301 ttacttgtat agggtgctta ctaatgttaa atagtttgga gtatataaca tttacattaa
     3361 ggactcatgg taggttaaaa ccctaaaggg taaggggttt aaaggaaata aatattcaaa
     3421 ctgagtctta ttgccaattt tggtgtaaat gagtttgtgt catttcaatt acaaagataa
     3481 aagtatgcca tataatttat gtaaaatttg tttttgtggt gtacataata gttatcaagt
     3541 ctgttgacag aagtatattt taaaagaata tacatgtgat gaatccataa tatctgaaac
     3601 tttgctgaga tatgagtggg gcacacttca ttgtaaatta cagcaaggaa agaaattaag
     3661 gaaagaagtt aagagagtga gagtgagtgg atattcacac aattgtgaaa tgtttattag
     3721 ttaccttttg tgatgtagtg tggttctcat tttaaacctt ggaaggtgaa aatgtacaaa
     3781 ctataaatat gaatgttcaa acactgacag aaattctaat atgaattaaa aaataacgaa
     3841 aaaacaacaa tatattttat cttactaatt atgaacttgg ttattctatt attcattcta
     3901 atgaatattt taagtgatgg tttaatttta ttcacatata gttgccatta aaaggttaac
     3961 tctctcataa aaacattttt tctattttaa
//
