LOCUS       XM_047433424            4630 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens golgin subfamily A member 6-like protein 4
            (LOC102724117), transcript variant X1, mRNA.
ACCESSION   XM_047433424
VERSION     XM_047433424.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; corrected model.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000015.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-361               AC243562.2         106507-106867
            362-481             AC243562.2         108535-108654
            482-541             AC243562.2         109277-109336
            542-622             AC243562.2         109522-109602
            623-710             AC243562.2         110267-110354
            711-1039            AC243562.2         110737-111065
            1040-1567           AC243562.2         111068-111595
            1568-1628           AC243562.2         111862-111922
            1629-1731           AC243562.2         112959-113061
            1732-4630           AC243562.2         113272-116170
FEATURES             Location/Qualifiers
     source          1..4630
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
     gene            1..4630
                     /gene="LOC102724117"
                     /note="golgin subfamily A member 6-like protein 4; The
                     sequence of the model RefSeq transcript was modified
                     relative to its source genomic sequence to represent the
                     inferred CDS: deleted 2 bases in 1 codon; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 11 ESTs, 136 long SRA reads, 3 Proteins, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102724117"
     CDS             278..1864
                     /gene="LOC102724117"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:1439..1441,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: golgin subfamily A member
                     6-like protein 4 isoform X1"
                     /protein_id="XP_047289380.1"
                     /db_xref="GeneID:102724117"
                     /translation="MWPQPRLPPHPAMSEKTQQGKLAAAKKKLKAYWQRKSPGIPAGA
                     NRKKKINGSSPDTATSGGYHSPGDSATGIYGEGRASSTTLEDLESQYQELAVALDSSS
                     AIISQLTENINSLVRTSKEEKKHEIHLVQKLGRSLFKLKNQTAEPLAPEPPAGPSKVE
                     QLQDETNHLRKELESVGRQLQAEVENNQMLSLLNRRQEERLREQEERLREQEERQREQ
                     EDRLHEQEERLREQEERLCEQEERLCEQEERLREHEEQEERLREQEERLCEQEKLPGQ
                     ERLLEEVEKLLEQERRQEEQERLLERERLLEEVEKLLEQERQQEEQERLLERERLLEE
                     VEKLLEQERRQEEQERLLERERLLDEVEELLDEVEELLEQERLRQQDERLWQQXTLQE
                     LERLRELERLRELERMLELGWEALYEQRAEPRSGFEELNNENKSTLQLEQQVKELKKS
                     GGAEEPRGSESAAAARPVAGAPVPQGAWMCGQAGWTPQEHPGLSGEAVGTGEAAGGAG
                     EAACHSFRAAENRELNITII"
     polyA_site      4630
                     /gene="LOC102724117"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cagagtgggc ggcccctccc ctttctctga gtgggcgggg acagcggttg catgggcagc
       61 tttccttatg atgccacagg tccctctgga catgctgctg cctggccacg cctcctttcc
      121 ctttcatctt tctcactgac caatgggctt ggagcattaa ggccacgccc ctattctgcg
      181 ttccattggt gccctggtta cgccacctgt ggctcagttg cacagctgcc tggtaggtga
      241 ctggaggcat tgagcagtgc tcactggtat ttcgctgatg tggccccaac cccgcctccc
      301 tccccacccc gcgatgtcag aaaaaacaca acaggggaaa ttggccgcag ccaagaaaaa
      361 gttaaaagca tattggcaga ggaagagccc tggcattcca gcaggagcta acaggaaaaa
      421 gaaaatcaat ggcagtagcc ctgacacagc cacttctggt ggttaccact cacctgggga
      481 ttcagcaaca ggtatctacg gggagggccg tgcatcctct actaccctgg aggatctgga
      541 gagccagtac caagaactag cagtggccct ggattcaagc tccgcaataa tcagtcaact
      601 cactgaaaac atcaattcac tggttcgcac atctaaggag gagaagaagc atgagataca
      661 tctggtacag aagcttggga ggagcttgtt caaactcaaa aaccagacgg ctgaacccct
      721 ggccccagag cccccagcag ggccatctaa ggtagagcag ctacaagatg agaccaacca
      781 cctaaggaag gagctagaga gtgtgggaag acagctccag gctgaggtgg aaaacaatca
      841 gatgttgagt ctcctgaaca ggagacagga ggagaggcta cgtgaacagg aggagaggct
      901 acgtgaacag gaggagaggc aacgtgaaca ggaggatagg ctacatgaac aggaggagag
      961 gctacgtgaa caggaggaga ggctgtgtga acaggaggag aggctgtgtg aacaggagga
     1021 gaggctacgt gaacatgagg agcaggagga gaggctacgt gaacaggagg agaggctgtg
     1081 tgaacaggag aagctgccag ggcaggagag gctgctggaa gaggtggaga agctgttaga
     1141 acaggagagg cggcaggagg agcaggagag gctgctggag agggagaggc tgctggaaga
     1201 ggtggagaag ctgttagaac aggagaggca gcaggaggag caggagaggc tgctggagag
     1261 ggagaggctg ctggaagagg tggagaagct gttagaacag gagaggcggc aggaggagca
     1321 ggagaggctg ctggagaggg agaggctgct ggacgaggtg gaggagctcc tggacgaggt
     1381 ggaggagctc ctggagcagg agaggcttcg gcaacaggat gagaggctgt ggcagcagta
     1441 gactctgcag gagctggaga ggctgcggga gctggagagg ctgcgggagc tggagaggat
     1501 gctggagctg gggtgggaag ccctgtacga gcagcgggcc gagccacgca gcggcttcga
     1561 ggagctgaac aacgagaaca agagcacact gcagttggag cagcaagtaa aggagctgaa
     1621 gaagtcgggt ggagctgaag agccaagagg ctccgagtct gcagcagcag ccagaccagt
     1681 agctggagcc ccagtcccac aaggagcttg gatgtgcgga caagcagggt ggactcccca
     1741 ggagcaccca ggcttgagtg gagaagctgt tggtacagga gaggcggcag gaggagcagg
     1801 agaggctgca tgccattctt ttcgggctgc ggagaacagg gagctaaaca tcaccatcat
     1861 ctaagagcgg gtcaaggaat tgaaaaaaaa aaacaaaaca tttaaggggt taatatccta
     1921 cacaattcat ttacttcatt tgaatgttag agccacttat gtttatttgt gtttctaatt
     1981 tatagtttaa atttatttgt gtttctaatt tatagtttaa atttatttgt gtttctaatt
     2041 tatagtttaa atttatttgt gtttctaatt tataatttaa atttatttgt aaaaagttaa
     2101 atgagagtgg gtgtttctct catgttcact ctggcatctt ttagcatttt tttaatttga
     2161 taattatagg acgttagcat gcatatcgag tttgccctta tgtggtggga gttcaaacac
     2221 acaaagaccc actgtatgca cacaactgtt cttgctggtt tgggataggc tgccatgctt
     2281 ttttaatgtt agtacagcct gtatattcat tacggaattc agataaaatt tccttatgtt
     2341 ctgctgttat gtttgatcga atcctaatca cagtgagctc ttcattagct caatatgcag
     2401 tttgccctca agtgcgcggt ctattacttt gtaatatgcc actgtgagta ctgacattta
     2461 cagttgttta aaggtggagc actggaaaca gcctttcccc ctttttctgt gtattgggga
     2521 tgggagtaat aacattttgg ggaggttttt aaatctccca gaagaggaaa gtggcctgct
     2581 ttggcaggtg tgtgcaggat agaatatgtt tcatttgttc cggtgccaag aatgagcgct
     2641 gtactacggt agttccctta ggatttgtat gtgctctggg ctcatgaaga tactgcctca
     2701 tgagctgtgg cagttgtact cttttttgat gacctgaaaa gggattattt ctgaggaatg
     2761 aaaggctccc atcatgactg tggatgtgga aaaccttttc tagctgagag catttatatc
     2821 tacaatacat tttaaagtca gagttcatgt tccctgtttt aatcacatga ctacatgtcc
     2881 cagtacacaa aagggcactg gttggcgttc tccttaatgt atttagtaaa gatcagaaga
     2941 aatcctttaa gagtttaaat gcccctggaa caggcatata caggctctag tcaagaatga
     3001 attcgagtga aggaaagctg tgtgacacct ggcattcctc tgtgttcatg gagcttattt
     3061 gaggctagaa gatggatttt accatctaga cctctctggc taatagctag tcttcaacca
     3121 tctgacatag gaatttactt cttttccttg aatggagaac actttaaaaa taataacaaa
     3181 cattattata aactaatata tgtgagagta cttagttgaa acaaaaagga gttttagtag
     3241 acagtattat actacatttg aaaatcaagg agcagtttat gcaacgtaaa atgtttacaa
     3301 actgcagcgc aatctactgt ttgtgactgt caaagtgtca tgaggaaagt gtctatacaa
     3361 tcacagagtt atatttcctc acaaagttct ttacgaagag tgaaatatgt ttttatacct
     3421 ctcagtttca gttagaggca tattttgtgt aatatttatg gcttaaaatg gactaaaggt
     3481 cctgttcttg ccttttctga acttgccgct tttgcattct ttgagttcag tttaaagaca
     3541 cttactttaa ctccatttta aaccctcggg ctagaaatcg taccactgtt aattagccac
     3601 gttatttggt ctaacagttt ttgtttatca ttctgaaact gagcttatct aatacattga
     3661 taaattattt caaaggtatt tttatagttc aaatcgcttc acttttaccc tgacacgtat
     3721 aaatgaatag gaatgacctt cagatagcgt ttagcaactg taaccaatct gacaataatg
     3781 tgttcatcag gtacctgtgg attaaatcac atactggcat atttaagatg aatgtcagtc
     3841 tgaaaaataa atatactata ttaattcaaa tacgactctt tgtgtaggta ttttgtcata
     3901 tgtttaagaa aaagctaaag agaatggaaa tcctatgaca ataactcaag tctttcttca
     3961 aagtgcatgc agtcttttgc agtacctcat tcagccaagt atttgttctc tacctcattc
     4021 agtataaggc agcctttaat ttgcttagaa ggcaacatta gaaggttaga gttcagcagg
     4081 aacatagaat tttaaaatgt gacttcaact gaataaattt gaatttctgt agggagtaaa
     4141 gaatcaaaac acctatttaa agactgcaaa atatgataat tatttttaaa gtaattgatt
     4201 aaacctggta ggttttccca aaatgaaaaa caatcagttc taaaaccaaa gctgattttt
     4261 agaaaatgtg aaaatgtaaa tcaaccctat ccataataga ttctctaaaa ctttatctta
     4321 cagtcacttt caaataacta ttcaaaaatg taactgctat attaacgtct taaaataatt
     4381 taaaacattt taaaatatga atactgtagt ttaaaacaaa gaatctaggg gaaggaaaag
     4441 tagacaaaga aatgccaatt ccagtccaaa gctgtatttg ccaagttttc ttagaatgac
     4501 ttttaccgat ttatgaattc ttatacacag aatgcataat ggaaatactg atttttgtct
     4561 aaagtggcat tattgactgc tgctgtgatg ctactgtaat gtaatacatt attaaattgt
     4621 ttcaaggtgc
//
