LOCUS       XM_047430149            5272 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens ligand of numb-protein X 2 (LNX2),
            transcript variant X5, mRNA.
ACCESSION   XM_047430149
VERSION     XM_047430149.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000013.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5272
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="13"
     gene            1..5272
                     /gene="LNX2"
                     /gene_synonym="PDZRN1"
                     /note="ligand of numb-protein X 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 23 ESTs, 285 long SRA reads, 6 Proteins, and 97%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:222484"
                     /db_xref="HGNC:HGNC:20421"
                     /db_xref="MIM:609733"
     CDS             778..2850
                     /gene="LNX2"
                     /gene_synonym="PDZRN1"
                     /codon_start=1
                     /product="ligand of Numb protein X 2 isoform X1"
                     /protein_id="XP_047286105.1"
                     /db_xref="GeneID:222484"
                     /db_xref="HGNC:HGNC:20421"
                     /db_xref="MIM:609733"
                     /translation="MGTTSDEMVSVEQTSSSSLNPLCFECGQQHWTRENHLYNYQNEV
                     DDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKSSIL
                     VHKLLDKLLVLCPFSSVCKDVMQRCDLEAHLKNRCPGASHRRVALERRKTSRTQAEIE
                     NENGPTLLDPAGTLSPEADCLGTGAVPVERHLTSASLSTWSEEPGLDNPAFEESAGAD
                     TTQQPLSLPEGEITTIEIHRSNPYIQLGISIVGGNETPLINIVIQEVYRDGVIARDGR
                     LLAGDQILQVNNYNISNVSHNYARAVLSQPCNTLHLTVLRERRFGNRAHNHSDSNSPR
                     EEIFQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAING
                     HDLKYGTPELAAQIIQASGERVNLTIARPGKPQPGNTIREAGNHSSSSQHHTPPPYYS
                     RPSSHKDLTQCVTCQEKHITVKKEPHESLGMTVAGGRGSKSGELPIFVTSVPPHGCLA
                     RDGRIKRGDVLLNINGIDLTNLSHSEAVAMLKASAASPAVALKALEVQIVEEATQNAE
                     EQPSTFSENEYDASWSPSWVMWLGLPSTLHSCHDIVLRRSYLGSWGFSIVGGYEENHT
                     NQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVTLTV
                     ICWPGSLV"
ORIGIN      
        1 gaatgttttt ctgtttggtt actcttgggg attaagcagc acatctgttt gatttacctt
       61 attgtataca ttataaacta catgaagata taagggatac atgttgattt tcttttttaa
      121 aatcgcagtg tatattttta aaattaatac atgcttaatg tagaaaatgc aggaaatcat
      181 aaactatgca aagagaataa acattactaa tcccaccagt tataattctt ttaaaataat
      241 attttccaac aaatatttga atgcctattc tgtgctgtgt accattctag atatttggga
      301 tagaaaagtg aattatagaa gttcttgttc tcagaaatct agtctagatt ataatttcag
      361 tatgattact ctattttgat aacatattta gatgacaaaa gcatagagtt gtgacaaggc
      421 aaaataaaaa tttattagca gttacgagta aagaatagtt tcaagcaaac ataaatttta
      481 gccttttcat gactgcaggt cctaagataa ctgaatacat atatgtcttc ttttcccact
      541 gggtgtttat tgaatgcctg ttatgtgcct ggcactgttc tacatggtga gactatagca
      601 atgagcaaga caggtgggat ctctgttctc atggagttta catgctgtgg ggcaggaaga
      661 gaaacaacag caaatagaaa aacacacctt gactttagtc agatacatca ctgtctgtta
      721 aaggaaacca agcgtgaagt ggaagtctaa cacatgagga tacagaattg attcaaaatg
      781 ggaacaacaa gtgatgagat ggtgtctgtg gaacagacct cctcctcttc tctaaacccc
      841 ctgtgttttg aatgtggcca acagcactgg acaagagaaa accatttgta caattaccag
      901 aatgaagtgg atgatgacct agtctgccat atttgccttc aacctctgct gcagccacta
      961 gacacaccct gtggacatac attctgctac aagtgcctca gaaacttttt acaagagaaa
     1021 gatttctgtc cgttggaccg gaaaagactt cattttaagt tgtgcaagaa gtctagtatt
     1081 ctagttcata aactcctaga caaattatta gttttatgtc cattttcttc agtgtgcaaa
     1141 gatgtaatgc aacgttgtga tctggaggca catctcaaaa acagatgtcc tggagcttct
     1201 catcggagag ttgccctgga gagaaggaaa actagtagaa ctcaagcaga gattgagaat
     1261 gaaaatgggc ccactctact agatcctgca ggtaccttat ctccagaagc agactgtttg
     1321 gggacaggcg cagtgcctgt ggagcggcac ttgacatcag cgtctctttc cacatggagt
     1381 gaggagcctg gccttgacaa ccctgccttt gaggagagcg ctggagctga caccacacaa
     1441 cagccactta gtttaccaga aggagaaatc accacgattg aaattcatcg gtccaatcct
     1501 tacattcagt taggaatcag cattgtgggt ggcaacgaaa cacctttgat taacattgtc
     1561 atccaggagg tctatcggga tggggtcatt gccagagacg ggagacttct tgctggagac
     1621 cagattcttc aggtcaacaa ctacaatatc agcaatgtgt cccataacta tgcccgagct
     1681 gtcctttccc agccctgcaa cacactgcat cttactgtgc ttcgagagag gcgctttggc
     1741 aaccgagcac acaaccattc tgatagtaac tctccacgag aagagatttt ccaagtggct
     1801 cttcataaac gggactctgg tgaacagctt ggcattaaat tggtgcgaag gacagatgag
     1861 ccaggggttt ttattcttga cctgttggaa ggggggttgg ctgcccagga cggcaggcta
     1921 agcagcaatg accgagtgct ggccatcaat gggcacgacc tgaagtatgg aactccggag
     1981 cttgctgccc agattattca ggccagtgga gagagagtga atttaacaat tgctagacca
     2041 gggaaacccc agcctggtaa caccattaga gaagcaggaa atcatagcag cagcagccag
     2101 caccacacac caccaccgta ttatagcaga ccaagctcac ataaggatct tactcagtgt
     2161 gttacatgcc aagaaaaaca cattactgta aagaaggaac cacatgaatc ccttggcatg
     2221 accgttgctg ggggcagggg aagtaagagt ggtgagctgc ccatctttgt gaccagtgtg
     2281 ccaccccatg gctgccttgc acgagatggc agaataaaga gaggtgatgt gttgctaaat
     2341 atcaacggca ttgatttgac caatttaagt cacagtgagg cagttgcaat gctgaaagcc
     2401 agtgccgcgt cccctgctgt tgcccttaaa gcacttgagg tccagattgt tgaggaggcg
     2461 actcagaacg cggaggagca gccgagtact ttcagcgaaa atgagtatga tgccagttgg
     2521 tccccatcat gggtcatgtg gcttgggctt cccagcacac ttcatagctg ccacgatata
     2581 gttttacgaa gaagttactt gggaagttgg ggctttagta tcgttggtgg atatgaagag
     2641 aaccacacca atcagccttt tttcattaaa actattgtct tgggaactcc tgcttattat
     2701 gatggaagat taaagtgtgg tgacatgatt gtggccgtaa atgggctgtc aaccgtgggc
     2761 atgagccact ctgcactagt tcccatgttg aaggagcaga ggaacaaagt cactctgacc
     2821 gttatttgtt ggcctggcag ccttgtatag attttggaaa ttggtttcaa atcttgcatc
     2881 ttcctttttt agatttttga aagaaaaccc tttggtttca ttgtgtttgt ggtttaggag
     2941 ctgctgacac tgctggtata cacagggcca aaacccacta agattgtccg tttatgttta
     3001 tttaaatggt ttcctaagtt agttacattt cttttagctt ggaaacagtc ttccactaac
     3061 ctttgtgagt ttatattttc agaattcaga cttagttgtt aaaatgttac ctatggtaat
     3121 gagcaaagct cacccaaact gtgccccaga tggagtaaag accttctggt gggtctttgt
     3181 tttcagtaac tgaatcatag aacgagttct gtatccctca ggcctgatgt cagcaaagcc
     3241 agtaacaaca gcgtgtactg ccactgtcat aaccaatacc atgaatgaat atactttaaa
     3301 ttttggtgat aactgttccc catttttttt tgaaccacag tctcactctc acccaggctg
     3361 gagtgcagtg gcacaatctc agctcactgc aagctccgcc tcctgggttc acgccattct
     3421 cccacctcag cctcccgagt agctgggact acaggcgtgt gccaccatgc ccagctaatt
     3481 ttttgtactt ttagtagaga cggggtttca ccgtgttagc caggatggtc tcgatctcct
     3541 gaccttgtga tctgcccgcc tcagcctccc aaagtgctgg gattacaggt gtgagctgcc
     3601 gcacccggcc gttcccattt tttattggtg ccaacatttc aaaacttcat actgtttata
     3661 aactgatttt ctggtttatt tctactgtaa tctctcaata ttcatagaag atgaagaaat
     3721 aagtctgaca acactaaaga aatttcttaa tatactatta ttagaatagt agaggataaa
     3781 agataatgtt atccagttac aaaggaattt ggatgataat tataacttaa tgttagagat
     3841 ggtaaagctg cacttacttg aacagcccaa aagcattaaa aatctatttc cagaggaatg
     3901 ttttgctatg tagggaaatt ttgaagtagt ttttgctaaa aaattatttc tagagttgtg
     3961 ttattcttag cagtaatctt ggctagaaat gtttttgtga tttatgcgat taaacgaaat
     4021 gataaagata aaaccatatt attaaatacc tatatatcac agctaagtag gagaaaggga
     4081 gaccttttta ttttgttcag gtaggagtat ttcttgtgta ttttagaaac aattattttt
     4141 cccattattt cttatgagat tagttgtttc aagtaggaga cagaaaagtt ctgttttgtt
     4201 ggaaatgtag gttttagatg tatctttcag tcagctctca gtcactagac tatttcatat
     4261 tttttgaaat gtttttgaaa attatgacta gcccattttt tgtcctttat tcaacatact
     4321 tatcctctga acacataaat aagtgaataa gataaaaata tctttacctt attaatatta
     4381 tacatacttg aaaaaaattt catttagaaa cctagttcag aatctgagca aatttacaag
     4441 tgacctctgt aataaatggt attgataatc agagaatgta tttcagaata ctacagtaca
     4501 atatattatg aagcatgacc actttatttt gaaacttagc aattgtattg ctggggttta
     4561 ttgtatctgt agcatgtcac tgattatttc agttagtttt ataatgattt ttaaaaaaca
     4621 tatctatttg gaataagata cagcaacaat cattgctact gacttgttca accccttagt
     4681 tacactgtat gatcaacata taacaagata cagtggaatg gcccatacag tatattactg
     4741 ttgtgtgatg attggctttg gaagcagttt gattttgaaa tgctttgata ttctaattga
     4801 catggaacaa gttttttccc tgctccccaa atagaatttt gtaaccaact ttgctatttt
     4861 tttaaagttt gtaagaatgt gtcatttctt ggggagtagc catccatcaa caaatatcct
     4921 gactgctact ttgttatata caaaatactt acattgaacc tggtggcata atgagtattt
     4981 tgaaagaaga aatttcttca ctctcatttt tatagaaatc ttggaatcag cttaagctgt
     5041 agcttttatg acaaaagaca gtcatttttg gtcagagtga tatttggtga cggaaacttg
     5101 ttcataattt attgttacta tagaactatt tggattttct catttttagt tctgatagtt
     5161 aaatattttg gtttgttctg tgccttcagt ttaaattatt tcaggatttt tcagatgttt
     5221 aaataatggt gtgaatcatt caggatggaa ataaaagtca tcctttctgt aa
//
