LOCUS       XM_011534995            4381 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens ligand of numb-protein X 2 (LNX2),
            transcript variant X7, mRNA.
ACCESSION   XM_011534995
VERSION     XM_011534995.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000013.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011534995.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4381
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="13"
     gene            1..4381
                     /gene="LNX2"
                     /gene_synonym="PDZRN1"
                     /note="ligand of numb-protein X 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 10 ESTs, 336 long SRA reads, and 96% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     72 samples with support for all annotated introns"
                     /db_xref="GeneID:222484"
                     /db_xref="HGNC:HGNC:20421"
                     /db_xref="MIM:609733"
     CDS             256..1959
                     /gene="LNX2"
                     /gene_synonym="PDZRN1"
                     /codon_start=1
                     /product="ligand of Numb protein X 2 isoform X2"
                     /protein_id="XP_011533297.1"
                     /db_xref="GeneID:222484"
                     /db_xref="HGNC:HGNC:20421"
                     /db_xref="MIM:609733"
                     /translation="MGTTSDEMVSVEQTSSSSLNPLCFECGQQHWTRENHLYNYQNEV
                     DDDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKSSIL
                     VHKLLDKLLVLCPFSSVCKDVMQRCDLEAHLKNRCPGASHRRVALERRKTSRTQAEIE
                     NENGPTLLDPAGTLSPEADCLGTGAVPVERHLTSASLSTWSEEPGLDNPAFEESAGAD
                     TTQQPLSLPEGEITTIEIHRSNPYIQLGISIVGGNETPLINIVIQEVYRDGVIARDGR
                     LLAGDQILQASGERVNLTIARPGKPQPGNTIREAGNHSSSSQHHTPPPYYSRPSSHKD
                     LTQCVTCQEKHITVKKEPHESLGMTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKR
                     GDVLLNINGIDLTNLSHSEAVAMLKASAASPAVALKALEVQIVEEATQNAEEQPSTFS
                     ENEYDASWSPSWVMWLGLPSTLHSCHDIVLRRSYLGSWGFSIVGGYEENHTNQPFFIK
                     TIVLGTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVTLTVICWPGSL
                     V"
ORIGIN      
        1 aggaaatccg cggcggcggc ggcggcggcg gcgattcctg gcggagcgga gccgggcagg
       61 ctctccgctc cctcagcggg ccgcggagag cgggagctgg tgccgagcag cggcgccagg
      121 agcccgtgcg cggcccgggc agccgcgctt tcccaaaaaa cacaccttga ctttagtcag
      181 atacatcact gtctgttaaa ggaaaccaag cgtgaagtgg aagtctaaca catgaggata
      241 cagaattgat tcaaaatggg aacaacaagt gatgagatgg tgtctgtgga acagacctcc
      301 tcctcttctc taaaccccct gtgttttgaa tgtggccaac agcactggac aagagaaaac
      361 catttgtaca attaccagaa tgaagtggat gatgacctag tctgccatat ttgccttcaa
      421 cctctgctgc agccactaga cacaccctgt ggacatacat tctgctacaa gtgcctcaga
      481 aactttttac aagagaaaga tttctgtccg ttggaccgga aaagacttca ttttaagttg
      541 tgcaagaagt ctagtattct agttcataaa ctcctagaca aattattagt tttatgtcca
      601 ttttcttcag tgtgcaaaga tgtaatgcaa cgttgtgatc tggaggcaca tctcaaaaac
      661 agatgtcctg gagcttctca tcggagagtt gccctggaga gaaggaaaac tagtagaact
      721 caagcagaga ttgagaatga aaatgggccc actctactag atcctgcagg taccttatct
      781 ccagaagcag actgtttggg gacaggcgca gtgcctgtgg agcggcactt gacatcagcg
      841 tctctttcca catggagtga ggagcctggc cttgacaacc ctgcctttga ggagagcgct
      901 ggagctgaca ccacacaaca gccacttagt ttaccagaag gagaaatcac cacgattgaa
      961 attcatcggt ccaatcctta cattcagtta ggaatcagca ttgtgggtgg caacgaaaca
     1021 cctttgatta acattgtcat ccaggaggtc tatcgggatg gggtcattgc cagagacggg
     1081 agacttcttg ctggagacca gattcttcag gccagtggag agagagtgaa tttaacaatt
     1141 gctagaccag ggaaacccca gcctggtaac accattagag aagcaggaaa tcatagcagc
     1201 agcagccagc accacacacc accaccgtat tatagcagac caagctcaca taaggatctt
     1261 actcagtgtg ttacatgcca agaaaaacac attactgtaa agaaggaacc acatgaatcc
     1321 cttggcatga ccgttgctgg gggcagggga agtaagagtg gtgagctgcc catctttgtg
     1381 accagtgtgc caccccatgg ctgccttgca cgagatggca gaataaagag aggtgatgtg
     1441 ttgctaaata tcaacggcat tgatttgacc aatttaagtc acagtgaggc agttgcaatg
     1501 ctgaaagcca gtgccgcgtc ccctgctgtt gcccttaaag cacttgaggt ccagattgtt
     1561 gaggaggcga ctcagaacgc ggaggagcag ccgagtactt tcagcgaaaa tgagtatgat
     1621 gccagttggt ccccatcatg ggtcatgtgg cttgggcttc ccagcacact tcatagctgc
     1681 cacgatatag ttttacgaag aagttacttg ggaagttggg gctttagtat cgttggtgga
     1741 tatgaagaga accacaccaa tcagcctttt ttcattaaaa ctattgtctt gggaactcct
     1801 gcttattatg atggaagatt aaagtgtggt gacatgattg tggccgtaaa tgggctgtca
     1861 accgtgggca tgagccactc tgcactagtt cccatgttga aggagcagag gaacaaagtc
     1921 actctgaccg ttatttgttg gcctggcagc cttgtataga ttttggaaat tggtttcaaa
     1981 tcttgcatct tcctttttta gatttttgaa agaaaaccct ttggtttcat tgtgtttgtg
     2041 gtttaggagc tgctgacact gctggtatac acagggccaa aacccactaa gattgtccgt
     2101 ttatgtttat ttaaatggtt tcctaagtta gttacatttc ttttagcttg gaaacagtct
     2161 tccactaacc tttgtgagtt tatattttca gaattcagac ttagttgtta aaatgttacc
     2221 tatggtaatg agcaaagctc acccaaactg tgccccagat ggagtaaaga ccttctggtg
     2281 ggtctttgtt ttcagtaact gaatcataga acgagttctg tatccctcag gcctgatgtc
     2341 agcaaagcca gtaacaacag cgtgtactgc cactgtcata accaatacca tgaatgaata
     2401 tactttaaat tttggtgata actgttcccc attttttttt gaaccacagt ctcactctca
     2461 cccaggctgg agtgcagtgg cacaatctca gctcactgca agctccgcct cctgggttca
     2521 cgccattctc ccacctcagc ctcccgagta gctgggacta caggcgtgtg ccaccatgcc
     2581 cagctaattt tttgtacttt tagtagagac ggggtttcac cgtgttagcc aggatggtct
     2641 cgatctcctg accttgtgat ctgcccgcct cagcctccca aagtgctggg attacaggtg
     2701 tgagctgccg cacccggccg ttcccatttt ttattggtgc caacatttca aaacttcata
     2761 ctgtttataa actgattttc tggtttattt ctactgtaat ctctcaatat tcatagaaga
     2821 tgaagaaata agtctgacaa cactaaagaa atttcttaat atactattat tagaatagta
     2881 gaggataaaa gataatgtta tccagttaca aaggaatttg gatgataatt ataacttaat
     2941 gttagagatg gtaaagctgc acttacttga acagcccaaa agcattaaaa atctatttcc
     3001 agaggaatgt tttgctatgt agggaaattt tgaagtagtt tttgctaaaa aattatttct
     3061 agagttgtgt tattcttagc agtaatcttg gctagaaatg tttttgtgat ttatgcgatt
     3121 aaacgaaatg ataaagataa aaccatatta ttaaatacct atatatcaca gctaagtagg
     3181 agaaagggag acctttttat tttgttcagg taggagtatt tcttgtgtat tttagaaaca
     3241 attatttttc ccattatttc ttatgagatt agttgtttca agtaggagac agaaaagttc
     3301 tgttttgttg gaaatgtagg ttttagatgt atctttcagt cagctctcag tcactagact
     3361 atttcatatt ttttgaaatg tttttgaaaa ttatgactag cccatttttt gtcctttatt
     3421 caacatactt atcctctgaa cacataaata agtgaataag ataaaaatat ctttacctta
     3481 ttaatattat acatacttga aaaaaatttc atttagaaac ctagttcaga atctgagcaa
     3541 atttacaagt gacctctgta ataaatggta ttgataatca gagaatgtat ttcagaatac
     3601 tacagtacaa tatattatga agcatgacca ctttattttg aaacttagca attgtattgc
     3661 tggggtttat tgtatctgta gcatgtcact gattatttca gttagtttta taatgatttt
     3721 taaaaaacat atctatttgg aataagatac agcaacaatc attgctactg acttgttcaa
     3781 ccccttagtt acactgtatg atcaacatat aacaagatac agtggaatgg cccatacagt
     3841 atattactgt tgtgtgatga ttggctttgg aagcagtttg attttgaaat gctttgatat
     3901 tctaattgac atggaacaag ttttttccct gctccccaaa tagaattttg taaccaactt
     3961 tgctattttt ttaaagtttg taagaatgtg tcatttcttg gggagtagcc atccatcaac
     4021 aaatatcctg actgctactt tgttatatac aaaatactta cattgaacct ggtggcataa
     4081 tgagtatttt gaaagaagaa atttcttcac tctcattttt atagaaatct tggaatcagc
     4141 ttaagctgta gcttttatga caaaagacag tcatttttgg tcagagtgat atttggtgac
     4201 ggaaacttgt tcataattta ttgttactat agaactattt ggattttctc atttttagtt
     4261 ctgatagtta aatattttgg tttgttctgt gccttcagtt taaattattt caggattttt
     4321 cagatgttta aataatggtg tgaatcattc aggatggaaa taaaagtcat cctttctgta
     4381 a
//
