LOCUS       NM_001395433             544 bp    mRNA    linear   PRI 08-APR-2024
DEFINITION  Homo sapiens LITAF domain containing (LITAFD), transcript variant
            1, mRNA.
ACCESSION   NM_001395433
VERSION     NM_001395433.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC022167.7.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2148093 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            inferred exon combination        :: based on alignments, homology
            MANE Ensembl match               :: ENST00000636296.2/
                                                ENSP00000490685.1
            RefSeq Select criteria           :: based on manual assertion,
                                                conservation, expression,
                                                longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-160               AC022167.7         144649-144808       c
            161-237             AC022167.7         143873-143949       c
            238-380             AC022167.7         142694-142836       c
            381-544             AC022167.7         141809-141972       c
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
                     /map="16p13.2"
     gene            1..544
                     /gene="LITAFD"
                     /note="LITAF domain containing"
                     /db_xref="GeneID:101929989"
                     /db_xref="HGNC:HGNC:53927"
     exon            1..160
                     /gene="LITAFD"
                     /inference="alignment:Splign:2.1.0"
     exon            161..237
                     /gene="LITAFD"
                     /inference="alignment:Splign:2.1.0"
     exon            238..380
                     /gene="LITAFD"
                     /inference="alignment:Splign:2.1.0"
     CDS             271..489
                     /gene="LITAFD"
                     /note="LITAF-like protein"
                     /codon_start=1
                     /product="lITAF domain-containing protein"
                     /protein_id="NP_001382362.1"
                     /db_xref="CCDS:CCDS92105.1"
                     /db_xref="GeneID:101929989"
                     /db_xref="HGNC:HGNC:53927"
                     /translation="MPVQAVCPYCGNRIITVTTFVPGALTWLLCTTLFLFGYVLGCCF
                     LAFCIRSLMDVKHSCPVCQRELFYYHRL"
     exon            381..544
                     /gene="LITAFD"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggtgtggcc ccagctcctc acacctcctg gcaaccgggc ctcctcatga gaattcctag
       61 aaataagcac atgagcactc ggagctcaga acacggtgct gcccaggcac tgttgctggg
      121 acagaggccc tccagagcac caggatggaa tcatccccgg atccttatcc tgctggtccc
      181 cctcctccct atggtcctcc tcaccagatg tactttgaag gcccccaagt tgttcagctg
      241 tatgccggca tgtccgtggt ggggacgtcc atgccggtgc aggccgtgtg tccctactgt
      301 ggaaaccgca tcatcacggt gacgaccttt gtcccgggtg ccctcacctg gctgctgtgt
      361 accaccctct tcctgttcgg gtacgtcctg ggctgctgct tcctggcatt ctgcataagg
      421 agcctaatgg acgtgaagca ctcgtgtccc gtgtgtcagc gcgagctctt ctactaccac
      481 cgcctgtgag cccccaagaa ataaatgcca ggggtgccac ctgggcacac ccgtgtctat
      541 gtcc
//
