LOCUS       XM_047428688            2642 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens LETM1 domain containing 1 (LETMD1),
            transcript variant X2, mRNA.
ACCESSION   XM_047428688
VERSION     XM_047428688.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000012.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2642
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
     gene            1..2642
                     /gene="LETMD1"
                     /gene_synonym="1110019O13Rik; HCCR; HCCR-1; HCCR-2; HCCR1;
                     HCCR2; HCRR-2; SLC55A3"
                     /note="LETM1 domain containing 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 73
                     ESTs, 44 long SRA reads, and 93% coverage of the annotated
                     genomic feature by RNAseq alignments, including 32 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:25875"
                     /db_xref="HGNC:HGNC:24241"
                     /db_xref="MIM:619070"
     CDS             31..972
                     /gene="LETMD1"
                     /gene_synonym="1110019O13Rik; HCCR; HCCR-1; HCCR-2; HCCR1;
                     HCCR2; HCRR-2; SLC55A3"
                     /codon_start=1
                     /product="LETM1 domain-containing protein 1 isoform X2"
                     /protein_id="XP_047284644.1"
                     /db_xref="GeneID:25875"
                     /db_xref="HGNC:HGNC:24241"
                     /db_xref="MIM:619070"
                     /translation="MALSRVCWARSAVWGSAVTPGHFVTRRLQLGRSGLAWGAPRSSK
                     LHLSPKADVKNLMSYVVTKTKAINGKYHRFLGRHFPRFYVLYTIFMKGLQMLWADAKK
                     ARRIKTNMWKHNIKFHQLPYREMEHLRQFRQDVTKCLFLGIISIPPFANYLVFLLMYL
                     FPRQLLIRHFWTPKQQTDFLDIYHAFRKQSHPEIISYLEKVIPLISDAGLRWRLTDLC
                     TKIQRGTHPAIHDILALRECFSNHPLGMNQLQALHVKALSRAMLLTSYLPPPLLRHRL
                     KTHTTVIHQLDKALAKLGIGQLTAQEVKSLLLITSEK"
ORIGIN      
        1 ctcttctctc ccgcttctct cgctgtgaag atggcgctct ccagggtgtg ctgggctcgg
       61 tcggctgtgt ggggctcggc agtcacccct ggacattttg tcacccggag gctgcaactt
      121 ggtcgctctg gcctggcttg gggggcccct cggtcttcaa agcttcacct ttctccaaag
      181 gcagatgtga agaacttgat gtcttatgtg gtaaccaaga caaaagcgat taatgggaaa
      241 taccatcgtt tcttgggtcg tcatttcccc cgcttctatg tcctgtacac aatcttcatg
      301 aaaggattgc agatgttatg ggctgatgcc aaaaaggcta gaagaataaa gacaaatatg
      361 tggaagcaca atataaagtt tcatcaactt ccataccggg agatggagca tttgagacag
      421 ttccgccaag acgtcaccaa gtgtcttttc ctaggtatta tttccattcc accttttgcc
      481 aactacctgg tcttcttgct aatgtacctg tttcccaggc aactactgat caggcatttc
      541 tggaccccaa aacaacaaac tgatttctta gatatctatc atgctttccg gaagcagtcc
      601 cacccagaaa ttattagtta tttagaaaag gtcatccctc tcatttctga tgcaggactc
      661 cggtggcgtc tgacagatct gtgcaccaag atacagcgtg gtacccaccc agcaatacat
      721 gatatcttgg ctctgagaga gtgtttctct aaccatcctc tgggcatgaa ccaactccag
      781 gctttgcacg tgaaagcctt gagccgggcc atgcttctca catcttacct gcctcctccc
      841 ttgttgagac atcgtttgaa gactcataca actgtgattc accaactgga caaggctttg
      901 gcaaagctgg ggattggcca gctgactgct caggaagtaa aatcgctgct tcttatcacc
      961 tctgagaaat gaaacaaaaa aagatgagat acctccacag cctaagaatc ctgtcatgct
     1021 tgttttcttt gcaaaaattt taagagacag ggtctcactc tgtgacccag gctggcgtgc
     1081 actggtgtga actcagctca ctgcagcctt gacctcctgg actcaagaga tcctcctacc
     1141 tcagcctccc acatagctag gattagaggt gtgagccacc atgcctggcc gtgtgctgtt
     1201 tgcttactct gttgacggag gagggttgtg gaactggaga gtgttcacaa ccatagggaa
     1261 tccacccctg aatgggcctc ccatgttcag tggcacccac acctcacccc gctgaccctg
     1321 gtgtagatat actatctcag gccaacttgg actgacctgg catttaatcc cagcctggct
     1381 gcaggcacac gcttctgggt cacaatacag tcggcagtca caaccacatt cttcccgtga
     1441 caggcggatg gctcgaagtt cttgcttctc ttcagcatca atacggtgga ccccagaagc
     1501 cctcagcagg gcccgtcgcc gtttggtggg cagaggctgc aggaagaagt aatcatccac
     1561 ctccacattt tccacatcaa tatcttcatc tgacacatca tccagcgtca ggccatcagc
     1621 ctccaccgac tccactgtcc cattcttggt cagctgccaa gagacaggaa aggttagcct
     1681 catagacatg agcggcatgc acctcctcag tgaccatccc agagcagcac tgtcccttga
     1741 accttctgca atcatgggaa tatctgtgct gtccaaaatg atggcagcta ctagcacatg
     1801 tggctactga gcactagaaa tgcagcaatt ggaaaactgt cattttattt atttttttga
     1861 gacaaaagtc tcattctgtc gtccaggcgg gagtgcagtg gtgcagtctt ggctcactac
     1921 aacctccgcc tcccgggttc aagcgattct cctgcctccc aagtagttgg gattacaggc
     1981 gtgagtcacc agcctggcta attttttcta ttttcagtaa agacagggtt tcactgtgtt
     2041 ggccaggcta gtcttgaact gctggcctca agtgatccac acacctcggc ctcccaaagt
     2101 gctggggtcc actgtgccag cccaatttac ataattttaa ttgaatagcc gtatgtgact
     2161 actggctgct atattcacta gcacaagtca aaagaataaa tccagagtgg gaagatggga
     2221 aatcttacgt accatcacct ttctgggtcc aagcttctca aaaacccgtc tcatcttccc
     2281 tcctacacga aaatctattt ccacaaacat accgtctatt tccagacatg tatcccctaa
     2341 tttacactca cttgccttct aacacagaga ggaaaaggta tgtgaatgac tggatgatcc
     2401 ttggatatac agaaaaatgt gaaacaccct tcaacttgca cccactgaat gcaaaactac
     2461 cttcttgaaa aaaaaagggc aaattaaagt gtagtaaaag gctaccaggt cttaatcaat
     2521 gaacccaaat ccccacagtg tgaacaatta tctgtgcatg cactaaagag cttcattcta
     2581 ctgtaaggag aaaaagcaaa tatattaaca ggtattaaag aaagcccttg gccgagaaaa
     2641 aa
//
