LOCUS       XM_047416390            2014 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens LIM domain binding 2 (LDB2), transcript
            variant X16, mRNA.
ACCESSION   XM_047416390
VERSION     XM_047416390.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000004.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="4"
     gene            1..2014
                     /gene="LDB2"
                     /gene_synonym="CLIM1; LDB-2; LDB1"
                     /note="LIM domain binding 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     ESTs, 230 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     19 samples with support for all annotated introns"
                     /db_xref="GeneID:9079"
                     /db_xref="HGNC:HGNC:6533"
                     /db_xref="MIM:603450"
     CDS             16..912
                     /gene="LDB2"
                     /gene_synonym="CLIM1; LDB-2; LDB1"
                     /codon_start=1
                     /product="LIM domain-binding protein 2 isoform X16"
                     /protein_id="XP_047272346.1"
                     /db_xref="GeneID:9079"
                     /db_xref="HGNC:HGNC:6533"
                     /db_xref="MIM:603450"
                     /translation="MENAIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVD
                     CDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMH
                     AQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCL
                     FQKWQRMVAPPAEPTRQPTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTTAANLSLS
                     SQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQYDAANGMDDEEDFNNSPALGNNSP
                     WNSKPPATQETKSENPPPQASQ"
ORIGIN      
        1 aaaaaatgaa tattaatgga aaatgctatc ggcaggaccc tcatcccccg ttactttagc
       61 actgtgtttg aaggaggggt gaccgacctg tattacattc tcaaacactc gaaagagtca
      121 taccacaact catccatcac ggtggactgc gaccagtgta ccatggtcac ccagcacggg
      181 aagcccatgt ttaccaaggt atgtacagaa ggcagactga tcttggagtt cacctttgat
      241 gatctcatga gaatcaaaac atggcacttt accattagac aataccgaga gttagtcccg
      301 agaagcatcc tagccatgca tgcacaagat cctcaggtcc tggatcagct gtccaaaaac
      361 atcaccagga tggggctaac aaacttcacc ctcaactacc tcaggttgtg tgtaatattg
      421 gagccaatgc aggaactgat gtcgagacat aaaacttaca acctcagtcc ccgagactgc
      481 ctgaagacct gcttgtttca gaagtggcag aggatggtgg ctccgccagc agaacccaca
      541 aggcaaccaa caaccaaacg gagaaaaagg aaaaattcca ccagcagcac ttccaacagc
      601 agcgctggga acaatgcaaa cagcactggc agcaagaaga agaccacagc tgcaaacctg
      661 agtctgtcca gtcaggtacc tgatgtgatg gtggtaggag agccaactct gatgggaggt
      721 gagtttgggg acgaggacga aaggctaatc actagattag aaaacacgca atatgatgcg
      781 gccaacggca tggacgacga ggaggacttc aacaattcac ccgcgctggg gaacaacagc
      841 ccgtggaaca gtaaacctcc cgccactcaa gagaccaaat cagaaaaccc cccaccccag
      901 gcttcccaat aagatgatcg gcaccagaat ccactgtcaa taggcccgtg ggtgatcatt
      961 acaattgcaa atctttactt acaggagagg aaacagaaga gataaaaact tttccatgca
     1021 aatatctatt tctaaaccac aatgatctga ttttctttct tctttctttt tttctaattg
     1081 agaggattat tcccagtaag cttccatgac cctttcttgg aggccttcac aggtaataca
     1141 gatactggca ctgattgtaa ttaaaatgag agaaaactct agcgcatctt ctggcacggt
     1201 tttaacaacg tgtttgtgtt gaatttcctt tttatgcatc aaacgaaggc catattgtcc
     1261 ataaatgctc agtgctcagg atctcattaa tatgccgaac ctaactacag atgacttttt
     1321 aatattgtaa aatattttct gctttttgac ttgcatctga gagtttcttg tttcagtaaa
     1381 aaaagaaaag acaaaaaaat cagctttgga aagtaattta aatgtacctt attttttttt
     1441 tctttatgtt ttctttcatt gggcaacagc taagagggcc cagcaaggta atttatggtt
     1501 gagctgatgt caattggttc ttgtcttgag tcgactcaat ttagcccaag tgctgaaaca
     1561 agaaatgtca tttttttcat caaagacacc agggcagatt tttaagtaaa gaaagacaat
     1621 tggaccctta agaatttatg catttgtaaa gttgctgttg atccaaatat tttcaagcca
     1681 tgtaatccat tggttttgtg ggcagtttaa taaacctgaa cctttgtgtg ttttctaatt
     1741 gtacctgagt tgaccatcct ttctttttat agtatatttc ttgtatgata ttttgtaaag
     1801 ctctcacctg gttcttttat ggggactttt cgtttttggg caactccagt gtatttatgt
     1861 gaaactttat aagagaatta atttttccat ttgcatatta atatgttcct ccacacatgt
     1921 aaaggcacag tggctccgtg tgttaaaaaa cagctgtatt ttatgtatgc tttactgata
     1981 agtgtgccaa taataaactg tgttaatgac caaa
//
