LOCUS       XM_006713976            2495 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens LIM domain binding 2 (LDB2), transcript
            variant X2, mRNA.
ACCESSION   XM_006713976
VERSION     XM_006713976.5
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000004.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_006713976.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2495
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="4"
     gene            1..2495
                     /gene="LDB2"
                     /gene_synonym="CLIM1; LDB-2; LDB1"
                     /note="LIM domain binding 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     ESTs, 210 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     6 samples with support for all annotated introns"
                     /db_xref="GeneID:9079"
                     /db_xref="HGNC:HGNC:6533"
                     /db_xref="MIM:603450"
     CDS             161..1393
                     /gene="LDB2"
                     /gene_synonym="CLIM1; LDB-2; LDB1"
                     /codon_start=1
                     /product="LIM domain-binding protein 2 isoform X2"
                     /protein_id="XP_006714039.1"
                     /db_xref="GeneID:9079"
                     /db_xref="HGNC:HGNC:6533"
                     /db_xref="MIM:603450"
                     /translation="MSSTPHDPFYSSPFGPFYRRHTPYMVQPEYRIYEMNKRLQSRTE
                     DLYMASENQLCHIIGNYDDDDDDDDDTLILDSISKLNNDSDNLWWDAFATEFFEDDAT
                     LTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQ
                     CTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQD
                     PQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQK
                     WQRMVAPPEPTRQPTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTTAANLSLSSQVP
                     DVMVVGEPTLMGGEFGDEDERLITRLENTQYDAANGMDDEEDFNNSPALGNNSPWNSK
                     PPATQETKSENPPPQASQ"
ORIGIN      
        1 agttcccagc cagcgtgttc agcctgcctg cctgcctgcc tctgtgtgtg tgtgagcgtg
       61 tgtgcgtgcg tctactttgt actgggaaga acacagccca tgtgctctgc atggacgtta
      121 ctgatactct gtttagcttg attttcgaaa agcaggcaag atgtccagca caccacatga
      181 ccccttctat tcttctcctt tcggcccatt ttataggagg catacaccat acatggtaca
      241 gccagagtac cgaatctatg agatgaacaa gagactgcag tctcgcacag aggatctcta
      301 catggcctca gaaaaccaat tgtgccacat cattgggaac tatgatgatg atgacgacga
      361 tgacgacgat acacttattc tggattctat cagcaaatta aataatgata gtgacaacct
      421 ctggtgggac gcctttgcca ctgaattttt tgaagatgac gccacattaa ccctttcatt
      481 ttgtttggaa gatggaccaa agcgatacac tatcggcagg accctcatcc cccgttactt
      541 tagcactgtg tttgaaggag gggtgaccga cctgtattac attctcaaac actcgaaaga
      601 gtcataccac aactcatcca tcacggtgga ctgcgaccag tgtaccatgg tcacccagca
      661 cgggaagccc atgtttacca aggtatgtac agaaggcaga ctgatcttgg agttcacctt
      721 tgatgatctc atgagaatca aaacatggca ctttaccatt agacaatacc gagagttagt
      781 cccgagaagc atcctagcca tgcatgcaca agatcctcag gtcctggatc agctgtccaa
      841 aaacatcacc aggatggggc taacaaactt caccctcaac tacctcaggt tgtgtgtaat
      901 attggagcca atgcaggaac tgatgtcgag acataaaact tacaacctca gtccccgaga
      961 ctgcctgaag acctgcttgt ttcagaagtg gcagaggatg gtggctccgc cagaacccac
     1021 aaggcaacca acaaccaaac ggagaaaaag gaaaaattcc accagcagca cttccaacag
     1081 cagcgctggg aacaatgcaa acagcactgg cagcaagaag aagaccacag ctgcaaacct
     1141 gagtctgtcc agtcaggtac ctgatgtgat ggtggtagga gagccaactc tgatgggagg
     1201 tgagtttggg gacgaggacg aaaggctaat cactagatta gaaaacacgc aatatgatgc
     1261 ggccaacggc atggacgacg aggaggactt caacaattca cccgcgctgg ggaacaacag
     1321 cccgtggaac agtaaacctc ccgccactca agagaccaaa tcagaaaacc ccccacccca
     1381 ggcttcccaa taagatgatc ggcaccagaa tccactgtca ataggcccgt gggtgatcat
     1441 tacaattgca aatctttact tacaggagag gaaacagaag agataaaaac ttttccatgc
     1501 aaatatctat ttctaaacca caatgatctg attttctttc ttctttcttt ttttctaatt
     1561 gagaggatta ttcccagtaa gcttccatga ccctttcttg gaggccttca caggtaatac
     1621 agatactggc actgattgta attaaaatga gagaaaactc tagcgcatct tctggcacgg
     1681 ttttaacaac gtgtttgtgt tgaatttcct ttttatgcat caaacgaagg ccatattgtc
     1741 cataaatgct cagtgctcag gatctcatta atatgccgaa cctaactaca gatgactttt
     1801 taatattgta aaatattttc tgctttttga cttgcatctg agagtttctt gtttcagtaa
     1861 aaaaagaaaa gacaaaaaaa tcagctttgg aaagtaattt aaatgtacct tatttttttt
     1921 ttctttatgt tttctttcat tgggcaacag ctaagagggc ccagcaaggt aatttatggt
     1981 tgagctgatg tcaattggtt cttgtcttga gtcgactcaa tttagcccaa gtgctgaaac
     2041 aagaaatgtc atttttttca tcaaagacac cagggcagat ttttaagtaa agaaagacaa
     2101 ttggaccctt aagaatttat gcatttgtaa agttgctgtt gatccaaata ttttcaagcc
     2161 atgtaatcca ttggttttgt gggcagttta ataaacctga acctttgtgt gttttctaat
     2221 tgtacctgag ttgaccatcc tttcttttta tagtatattt cttgtatgat attttgtaaa
     2281 gctctcacct ggttctttta tggggacttt tcgtttttgg gcaactccag tgtatttatg
     2341 tgaaacttta taagagaatt aatttttcca tttgcatatt aatatgttcc tccacacatg
     2401 taaaggcaca gtggctccgt gtgttaaaaa acagctgtat tttatgtatg ctttactgat
     2461 aagtgtgcca ataataaact gtgttaatga ccaaa
//
