LOCUS       NM_001001480            1156 bp    mRNA    linear   PRI 17-FEB-2024
DEFINITION  Homo sapiens keratin associated protein 5-5 (KRTAP5-5), mRNA.
ACCESSION   NM_001001480 XM_001130660
VERSION     NM_001001480.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1156)
  AUTHORS   Wang,Y. and Tatakis,D.N.
  TITLE     Human gingiva transcriptome during wound healing
  JOURNAL   J Clin Periodontol 44 (4), 394-402 (2017)
   PUBMED   28005267
  REMARK    GeneRIF: KRTAP5-5 expression is significantly downregulated in
            human masticatory mucosa during wound healing
REFERENCE   2  (bases 1 to 1156)
  AUTHORS   Yahagi,S., Shibuya,K., Obayashi,I., Masaki,H., Kurata,Y., Kudoh,J.
            and Shimizu,N.
  TITLE     Identification of two novel clusters of ultrahigh-sulfur
            keratin-associated protein genes on human chromosome 11
  JOURNAL   Biochem Biophys Res Commun 318 (3), 655-664 (2004)
   PUBMED   15144888
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AP006285.2.
            
            On Sep 9, 2021 this sequence version replaced NM_001001480.2.
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000399676.4/ ENSP00000382584.2
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1156              AP006285.2         125187-126342
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="11"
                     /map="11p15.5"
     gene            1..1156
                     /gene="KRTAP5-5"
                     /gene_synonym="KRTAP5-11; KRTAP5.5"
                     /note="keratin associated protein 5-5"
                     /db_xref="GeneID:439915"
                     /db_xref="HGNC:HGNC:23601"
     exon            1..1156
                     /gene="KRTAP5-5"
                     /gene_synonym="KRTAP5-11; KRTAP5.5"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..780
                     /gene="KRTAP5-5"
                     /gene_synonym="KRTAP5-11; KRTAP5.5"
                     /note="keratin associated protein 5-11; keratin-associated
                     protein 5.5; keratin-associated protein 5.11; ultrahigh
                     sulfur keratin-associated protein 5.5"
                     /codon_start=1
                     /product="keratin-associated protein 5-5"
                     /protein_id="NP_001001480.2"
                     /db_xref="CCDS:CCDS41592.1"
                     /db_xref="GeneID:439915"
                     /db_xref="HGNC:HGNC:23601"
                     /translation="MGCCGCSGGCGSGCGGRGSGCGGCGSGCGGCGSGCGGCGSGCGG
                     CGGCGSGCAGCGGCGSGCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGGSKRGCVSC
                     GVSKGACGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSYGCSQSSCC
                     KPCCCSSGCGSSCCQSSCCKPYCCQSSCCKPYCCQSSCCKPCSCFSGCGSSCCQSSCY
                     KPCCCQSSCCVPVCCQCKI"
     regulatory      1136..1141
                     /regulatory_class="polyA_signal_sequence"
                     /gene="KRTAP5-5"
                     /gene_synonym="KRTAP5-11; KRTAP5.5"
                     /note="hexamer: AACAAA"
     polyA_site      1156
                     /gene="KRTAP5-5"
                     /gene_synonym="KRTAP5-11; KRTAP5.5"
                     /note="major polyA site"
ORIGIN      
        1 ggctccacac ctgcacctcc ctctcacctg ctcctctacc tgctccaccc tcaatccacc
       61 agaaccatgg gctgctgtgg ctgctccgga ggctgtggct ccggctgtgg aggccgtggc
      121 tccggctgtg ggggctgtgg ctccggctgt ggaggctgtg gctctggctg tgggggctgt
      181 ggctccggct gtggaggctg tgggggctgt ggctccggct gtgcgggctg tgggggatgt
      241 ggctccggct gctgtgtgcc tgtctgctgc tgcaagccca tgtgctgctg tgtgccagct
      301 tgttcctgct ccagctgtgg caaagggggc tgtggctctt gcgggggctc caagagaggc
      361 tgtgtctcct gtggggtgtc caagggggcc tgtggctcct gtggggggtc caaggggggc
      421 tgtggctcct gtggggggtc caaggggggc tgtggctcct gtggggggtc caaggggggc
      481 tgtggctcct gtggggggtc caaggggggc tgtggttctt atggctgctc ccagtccagc
      541 tgctgcaagc cctgctgctg ctcctcaggc tgtgggtcat cctgctgcca gtccagctgc
      601 tgtaagcctt actgctgcca gtccagctgc tgtaagccct actgctgcca gtccagctgc
      661 tgtaagccct gtagctgctt ctcaggctgt ggatcatcct gctgccaatc cagctgctac
      721 aagccctgct gctgccagtc cagctgctgt gtccccgtgt gctgccagtg taagatctga
      781 ggctctgact gcagactgca ggtggcctga ctggtgaagg gcccggctgc ccagcttcct
      841 tgccctgggt tctctggtgc tccactgtct ccactgtgtc ctcactggct tcatccactc
      901 cacaccagtg ctcccgaaac tgactgagga ccccttctgg ctcattgcct actacttctc
      961 ctgaacttcc tctccctgct cctcactcat ttaagatcca aagcggccca ctgaggcccc
     1021 agaggcagat cagacccctt agaccctgac agctgctcct tctttcagga gtgtgatcga
     1081 ccctcaatct ctctggctgt ctgtatatca agactgaatc ctgaccctct aaataaacaa
     1141 agtctctaag cacaaa
//
