LOCUS       XM_047418361            4016 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens lysine demethylase 1B (KDM1B), transcript
            variant X19, mRNA.
ACCESSION   XM_047418361
VERSION     XM_047418361.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000006.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4016
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
     gene            1..4016
                     /gene="KDM1B"
                     /gene_synonym="AOF1; C6orf193; LSD2"
                     /note="lysine demethylase 1B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 12 ESTs, 1061 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 31 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:221656"
                     /db_xref="HGNC:HGNC:21577"
                     /db_xref="MIM:613081"
     CDS             208..2154
                     /gene="KDM1B"
                     /gene_synonym="AOF1; C6orf193; LSD2"
                     /codon_start=1
                     /product="lysine-specific histone demethylase 2 isoform
                     X15"
                     /protein_id="XP_047274317.1"
                     /db_xref="GeneID:221656"
                     /db_xref="HGNC:HGNC:21577"
                     /db_xref="MIM:613081"
                     /translation="MATPRGRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDG
                     GSEKKYRKCEKAGCTATCPVCFASASESHKDGYDKYTTWKKIWTSNGKTEPSPKAFMA
                     DQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAIKEALTPQKCIPHI
                     IVRGLVRIRCVQEVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPA
                     GLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMC
                     EQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPL
                     GEKIEEIYKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQ
                     FAGDHTLLTPGYSVIIEKLAEGLDIQLKSPQVQCIDYSGDEVQVTTTDGTGYSAQKVL
                     VTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFG
                     HVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLREL
                     FKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATN
                     RHFPQTVTGAYLSGVREASKIAAF"
ORIGIN      
        1 gtgacagggg cggaagcggc ggcggcggcg gcggccgaga agaggctggg gctcgcggcg
       61 cggctgcagc cgtcctgtgc gcgcggcgcg cggctccgga gaggcgcccg cagtccaggg
      121 cggcgcgcac cgcctcgctg gcgctcagag cggtgccttt tccccgagac tcccggcacc
      181 tcttcagcgc aaagattatt taatgtaatg gcaactccac gggggaggac aaagaaaaaa
      241 gcatcttttg atcattctcc ggatagcctt cctttgagga gctccggtag gcaggcgaag
      301 aagaaagcaa cagagacaac agatgaggat gaagatggtg gctcagagaa gaagtacagg
      361 aaatgtgaaa aggcaggctg tacggcaaca tgtcctgtgt gctttgcaag tgcttctgaa
      421 agccataagg atggatatga caaatatact acatggaaaa aaatatggac tagcaatggc
      481 aaaaccgaac ctagtcccaa agctttcatg gcagaccagc aactccccta ctgggttcag
      541 tgtacaaaac ctgagtgtag aaaatggagg cagcttacca aggaaatcca gcttactcca
      601 cagatagcca agacttatcg atgcggtatg aaaccaaata ctgctattaa ggaagctctt
      661 actcctcaga aatgtattcc tcacatcatc gtccggggtc tcgtgcgtat tcgatgcgtt
      721 caggaagtgg agagaatact gtattttatg accagaaaag gtctcatcaa cactggagtt
      781 ctcagcgtgg gagccgacca gtatcttctc cctaaggact accacaataa atcagtcatc
      841 attatcgggg ctggtccagc aggattagca gctgctaggc aactgcataa ctttggaatt
      901 aaggtgactg tcctggaagc caaagacaga attggaggcc gagtctggga tgataaatct
      961 tttaaaggcg tcacagtggg aagaggagct cagattgtca atgggtgtat taacaaccca
     1021 gtagcattaa tgtgtgaaca acttggcatc agcatgcata aatttggaga aagatgtgac
     1081 ttaattcagg aaggtggaag aataactgac cccactattg acaagcgcat ggattttcat
     1141 tttaatgctc tcttggatgt tgtctctgag tggagaaagg ataagactca gctccaagat
     1201 gtccctttag gagaaaagat agaagaaatc tacaaggcat ttattaagga atctggtatc
     1261 caattcagtg agctggaggg acaggtgctt cagttccatc tcagtaacct ggagtacgcc
     1321 tgtggcagca accttcacca ggtatctgct cgctcgtggg accacaatga attctttgcc
     1381 cagtttgctg gtgaccacac tctgctaact cccgggtact cggtgataat tgaaaaactg
     1441 gcagaagggc ttgacattca actcaaatct ccacaggtgc agtgtattga ttattctgga
     1501 gatgaagtgc aggttaccac tacagatggc acagggtatt ctgcacaaaa ggtattagtc
     1561 actgtaccac tggctttact acagaaaggt gccattcagt ttaatccacc gttgtcagag
     1621 aagaagatga aggctatcaa cagcttaggc gcaggcatca ttgaaaagat tgccttgcaa
     1681 tttccgtata gattttggga cagtaaagta caaggggctg acttttttgg tcacgttcct
     1741 cccagtgcca gcaagcgagg gctttttgcc gtgttctatg acatggatcc ccagaagaag
     1801 cacagcgtgc tgatgtctgt gattgccggg gaggctgtcg catccgtgag gaccctggat
     1861 gacaaacagg tgctgcagca gtgcatggcc acgctccggg agctgttcaa ggagcaggag
     1921 gtcccagatc ccacaaagta ttttgtcact cggtggagca cagacccatg gatccagatg
     1981 gcatacagtt ttgtgaagac aggtggaagt ggggaggcct acgatatcat tgctgaagac
     2041 attcaaggaa ccgtcttttt cgctggtgag gcaacaaaca ggcatttccc acaaactgtt
     2101 acaggggcat atttgagtgg cgttcgagaa gcaagcaaga ttgcagcatt ttaagaattc
     2161 ggtggaccca gctttcttct gtaccccaga tggggaaatt tgaatcacat gttaaacctc
     2221 agttttataa gagggggaaa aaaccgtctc tacatagtaa aactgaaatg tttctaaggc
     2281 gatatgataa tgcaaaccta tttcatcact ctaaaagcac tgacctcaaa aaaccttata
     2341 agcacttaga tttaattgca ttttccatag gttcaactac tgctgaaagt ctggatttca
     2401 gaataaagca gaatgtaagt ttcagttgag gccatggatt tgattgttcc atggctggaa
     2461 gttcccttta gatttcacat tttatatggc tgatcaattt tcatacattg agaaaccaag
     2521 tcaatcaagc aggaatcatt taaaaaccag ataaagccat gtttttcttc tgtgacaatt
     2581 tatcagtatc tttaccaatg agccttaatt tttatatagg tccaatattg agcttttact
     2641 taaaatttag atagaacttt tttttggata cagcacaaac tccagttgac agtaaaatga
     2701 agcttctagg tattttgtat tgtacatatt tcctcctact gggtgttcaa aagaaattta
     2761 aattcaagta ccttttgtga taaaatgttt tagatttgtg cacccattgg caaaacagga
     2821 aagtttccag ataggtattg tatcattgag aatgcagcac agatagtgtg ggcttcacac
     2881 tatagacaca gaatatagct ttttcttaaa gccaaatttg ggtgatagga cactttaaat
     2941 atccttaatt ttggcaacca ctagcaaaaa aacttgtcag aataatttaa ccaagcccct
     3001 ctccacttct tttatttaaa agcactgatt caattgctag gaatattttt gcagattttt
     3061 ctttacagta ttccataggc aggtccactg gaaaactgca gaaaaatgtg agctctcctg
     3121 gtaaatagta tacattttat aagctatatt ttaaaggcct aagaacatgg caagtattta
     3181 cttttatctt ttttttaaaa acactcatga cagaaaacag tttaataata tctcattcta
     3241 aaataaaaca ctggttgcag ggtcttcagg atgcctattt tgccaagaaa cttcagtata
     3301 caggttagaa atatgctttt gtttttgaac aataatatac tggtttgctt taaagaaggg
     3361 actaaatatg actttaaaga gacttcaaaa tattgagtat tttaaaaatt taaaagtagg
     3421 tcagtttata acgagtaaat acctaacaca ccaagaatgt gcagtgaacc tcaggcattt
     3481 aagacacctc ccccaccgcc cgccccccgc cccccccaat caaagtgtgg tcccaaaaca
     3541 agccaacagc tgtatatctc aaaagttaac ccaagacaac tctgatattt aggttatttg
     3601 ttgagactca ttggtactga ctggcaagta ttctgcttta aagtatcatg tattaaaatg
     3661 tttagacagc atgtgtttta aagtgataaa tgcaaaatgt taagtttgaa atggttaaca
     3721 gtaaattatt atgttagttt ccaggcactt gaactgtgct acaagtaggg gaaaacctac
     3781 tttaaagtat ggtaaatgtg tgttttaaac ttcctatcaa gtgacatact tcatttgatt
     3841 ttttgtttaa gaagccatgg tacttttttc ttgagttact ttggatatgt tttttcaatg
     3901 ccatctgaag attttgtaat tgagtagcag taaatataca gatttacaat gttttaacta
     3961 cagttcatga atagctggtt gtgtaaaact aataaaaaac tagactttca catgta
//
