LOCUS       XM_047435938            3148 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens junction plakoglobin (JUP), transcript
            variant X9, mRNA.
ACCESSION   XM_047435938
VERSION     XM_047435938.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000017.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3148
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
     gene            1..3148
                     /gene="JUP"
                     /gene_synonym="CTNNG; DP3; DPIII; PDGB; PG; PKGB"
                     /note="junction plakoglobin; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 113 ESTs, 1321 long SRA reads, 14 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 21 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:3728"
                     /db_xref="HGNC:HGNC:6207"
                     /db_xref="MIM:173325"
     CDS             73..2310
                     /gene="JUP"
                     /gene_synonym="CTNNG; DP3; DPIII; PDGB; PG; PKGB"
                     /codon_start=1
                     /product="junction plakoglobin isoform X2"
                     /protein_id="XP_047291894.1"
                     /db_xref="GeneID:3728"
                     /db_xref="HGNC:HGNC:6207"
                     /db_xref="MIM:173325"
                     /translation="MEVMNLMEQPIKVTEWQQTYTYDSGIHSGANTCVPSVSSKGIME
                     EDEACGRQYTLKKTTTYTQGVPPSQGDLEYQMSTTARAKRVREAMCPGVSGEDSSLLL
                     ATQVEGQATNLQRLAEPSQLLKSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVT
                     KAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREG
                     LLAIFKSGGIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPL
                     LNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQALVQIMRNYSYEKLLWTTSRV
                     LKVLSVCPSNKPAIVEAGGMQALGKHLTSNSPRLVQNCLWTLRNLSDVATKQEGLESV
                     LKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGDKDD
                     ITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNL
                     ALCPANHAPLQEAAVIPRLVQLLVKAHQDAQRHVAAGTQQPYTDGVRMEEIVEGCTGA
                     LHILARDPMNRMEIFRLNTIPLFVQLLYSSVENIQRVAAGVLCELAQDKEAADAIDAE
                     GASAPLMELLHSRNEGTATYAAAVLFRISEDKNPDYRKRVSVELTNSLFKHDPAAWEA
                     AQSMIPINEPYGDDMDATYRPMYSSDVPLDPLEMHMDMDGDYPIDTYSDGLRPPYPTA
                     DHMLA"
ORIGIN      
        1 agaagctgct agaagccctg agtgccttct cttgcccctg ggagagttgg gtcagggcag
       61 caagtagcca cgatggaggt gatgaacctg atggagcagc ctatcaaggt gactgagtgg
      121 cagcagacat acacctacga ctcgggtatc cactcgggcg ccaacacctg cgtgccctcc
      181 gtcagcagca agggcatcat ggaggaggat gaggcctgcg ggcgccagta cacgctcaag
      241 aaaaccacca cttacaccca gggggtgccc cccagccaag gtgatctgga gtaccagatg
      301 tccacaacag ccagggccaa acgggtgcgg gaggccatgt gccctggtgt gtcaggcgag
      361 gacagctcgc ttctgctggc cacccaggtg gaggggcagg ccaccaacct gcagcgactg
      421 gccgagccgt cccagctgct caagtcggcc attgtgcatc tcatcaacta ccaggacgat
      481 gccgagctgg ccactcgcgc cctgcccgag ctcaccaaac tgctcaacga cgaggacccg
      541 gtggtggtga ccaaggcggc catgattgtg aaccagctgt cgaagaagga ggcgtcgcgg
      601 cgggccctga tgggctcgcc ccagctggtg gccgctgtcg tgcgtaccat gcagaatacc
      661 agcgacctgg acacagcccg ctgcaccacc agcatcctgc acaacctctc ccaccaccgg
      721 gaggggctgc tcgccatctt caagtcgggt ggcatccctg ctctggtccg catgctcagc
      781 tcccctgtgg agtcggtcct gttctatgcc atcaccacgc tgcacaacct gctcctgtac
      841 caggagggcg ccaagatggc cgtgcgcctg gccgacgggc tgcaaaagat ggtgcccctg
      901 ctcaacaaga acaaccccaa gttcctggcc atcaccaccg actgcctgca gctcctggcc
      961 tacggcaacc aggagagcaa gctgatcatc ctggccaatg gtgggcccca ggccctcgtg
     1021 cagatcatgc gtaactacag ttatgaaaag ctgctctgga ccaccagtcg tgtgctcaag
     1081 gtgctatccg tgtgtcccag caataagcct gccattgtgg aggctggtgg gatgcaggcc
     1141 ctgggcaagc acctgaccag caacagcccc cgcctggtgc agaactgcct gtggaccctg
     1201 cgcaacctct cagatgtggc caccaagcag gagggcctgg agagtgtgct gaagattctg
     1261 gtgaatcagc tgagtgtgga tgacgtcaac gtcctcacct gtgccacggg cacactctcc
     1321 aacctgacat gcaacaacag caagaacaag acgctggtga cacagaacag cggtgtggag
     1381 gctctcatcc atgccatcct gcgtgctggt gacaaggacg acatcacgga gcctgccgtc
     1441 tgcgctctgc gccacctcac tagccgccac cctgaggccg agatggccca gaactctgtg
     1501 cgtctcaact atggcatccc agccatcgtg aagctgctca accagcccaa ccagtggcca
     1561 ctggtcaagg caaccatcgg cttgatcagg aatctggccc tgtgcccagc caaccatgcc
     1621 ccgctgcagg aggcagcggt catcccccgc ctcgtccaac tgctggtgaa ggcccaccag
     1681 gatgcccagc gccacgtagc tgcaggcaca cagcagccct acacggatgg tgtgaggatg
     1741 gaggagattg tggagggctg caccggagca ctgcacatcc tcgcccggga ccccatgaac
     1801 cgcatggaga tcttccggct caacaccatt cccctgtttg tgcagctcct gtactcgtcg
     1861 gtggagaaca tccagcgcgt ggctgccggg gtgctgtgtg agctggccca ggacaaggag
     1921 gcggccgacg ccattgatgc agagggggcc tcggccccac tcatggagtt gctgcactcc
     1981 cgcaacgagg gcactgccac ctacgctgct gccgtcctgt tccgcatctc cgaggacaag
     2041 aacccagact accggaagcg cgtgtccgtg gagctcacca actccctctt caagcatgac
     2101 ccggctgcct gggaggctgc ccagagcatg attcccatca atgagcccta tggagatgac
     2161 atggatgcca cctaccgccc catgtactcc agcgatgtgc cccttgaccc gctggagatg
     2221 cacatggaca tggatggaga ctaccccatc gacacctaca gcgacggcct caggcccccg
     2281 taccccactg cagaccacat gctggcctag gcggcctggc cccagtgcgg ttcctcatct
     2341 gagaggctct ccgtgcaggc gatggggcaa gacagaaaag tgcctgagct ggggaagccg
     2401 gggtgtaact tcctgctgca ccctgcgcct ccagaggtcc tccgtagggt ctttcttggg
     2461 atagtgttct gctcctgctt ttctgtcctg ggcatgggtc cagggcctga caccccctcc
     2521 ccgcccctgt ggccctggcc actaaagctt cagactcaag tacccattct gttttccccc
     2581 agcaacgccc ctccaaacct ccagcctccc tgtctccagc tgcctgggcc cggaagggct
     2641 ttggttcctt ctctgggtct gattttctca ctgaactcca ccgaccaact gccctaagcc
     2701 cccagggcct ccagggccca ggttcgagac ccaaaccccc aaaatccaaa acttctcttg
     2761 aaaagttcag ggaccgtcca ggggagatgg ggaggagata tggagtgagt cacctgctcc
     2821 agaagatgcc agcttctctc tccagggtgc ttagttggct ttgcccaccc ctcactcccc
     2881 agggagctct ggggacagct tcctcacacc cctgtcccac ccacacagct gccctagctg
     2941 accccgagaa gtgctcttgg ctgacccctc tggtgtgtgg tgaggggctt tctcttcccc
     3001 ttcctgtttc agaccccccc atttcccgca catggtgtgg ggggctgggg gaggtccaag
     3061 cagagtgttt tattattatc gctttatgtt tttggttatt ggtttttttg tatagaccaa
     3121 agcaaagaaa ataaaaataa cacagatg
//
