LOCUS       XM_047442088            4212 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens immunoglobulin superfamily member 1
            (IGSF1), transcript variant X6, mRNA.
ACCESSION   XM_047442088
VERSION     XM_047442088.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000023.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4212
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
     gene            1..4212
                     /gene="IGSF1"
                     /gene_synonym="CHTE; IGCD1; IGDC1; INHBP; p120; PGSF2"
                     /note="immunoglobulin superfamily member 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 102 ESTs, 42 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:3547"
                     /db_xref="HGNC:HGNC:5948"
                     /db_xref="MIM:300137"
     CDS             161..3922
                     /gene="IGSF1"
                     /gene_synonym="CHTE; IGCD1; IGDC1; INHBP; p120; PGSF2"
                     /codon_start=1
                     /product="immunoglobulin superfamily member 1 isoform X4"
                     /protein_id="XP_047298044.1"
                     /db_xref="GeneID:3547"
                     /db_xref="HGNC:HGNC:5948"
                     /db_xref="MIM:300137"
                     /translation="MTLDRPGEGATMLKTFTVLLFCIRMSLGMTSIVMDPQPELWIES
                     NYPQAPWENITLWCRSPSRISSKFLLLKDKTQMTWIRPSHKTFQVSFLIGALTESNAG
                     LYRCCYWKETGWSKPSKVLELEAPGQLPKPIFWIQAETPALPGCNVNILCHGWLQDLV
                     FMLFKEGYAEPVDYQVPTGTMAIFSIDNLTPEDEGVYICRTHIQMLPTLWSEPSNPLK
                     LVVAGLYPKPTLTAHPGPIMAPGESLNLRCQGPIYGMTFALMRVEDLEKSFYHKKTIK
                     NEANFFFQSLKIQDTGHYLCFYYDASYRGSLLSDVLKIWVTDTFPKTWLLARPSAVVQ
                     MGQNVSLRCRGPVDGVGLALYKKGEDKPLQFLDATSIDDNTSFFLNNVTYSDTGIYSC
                     HYLLTWKTSIRMPSHNTVELMVVDKPPKPSLSAWPSTVFKLGKAITLQCRVSHPVLEF
                     SLEWEERETFQKFSVNGDFIISNVDGKGTGTYSCSYRVETHPNIWSHRSEPLKLMGPA
                     GYLTWNYVLNEAIRLSLIMQLVALLLVVLWIRWKCRRLRIREAWLLGTAQGVTMLFIV
                     TALLCCGLCNGVLIEETEIVMPTPKPELWAETNFPLAPWKNLTLWCRSPSGSTKEFVL
                     LKDGTGWIATRPASEQVRAAFPLGALTQSHTGSYHCHSWEEMAVSEPSEALELVGTDI
                     LPKPVISASPTIRGQELQLRCKGWLAGMGFALYKEGEQEPVQQLGAVGREAFFTIQRM
                     EDKDEGNYSCRTHTEKRPFKWSEPSEPLELVIKEMYPKPFFKTWASPVVTPGARVTFN
                     CSTPHQHMSFILYKDGSEIASSDRSWASPGASAAHFLIISVGIGDGGNYSCRYYDFSI
                     WSEPSDPVELVVTEFYPKPTLLAQPGPVVFPGKSVILRCQGTFQGMRFALLQEGAHVP
                     LQFRSVSGNSADFLLHTVGAEDSGNYSCIYYETTMSNRGSYLSMPLMIWVTDTFPKPW
                     LFAEPSSVVPMGQNVTLWCRGPVHGVGYILHKEGEATSMQLWGSTSNDGAFPITNISG
                     TSMGRYSCCYHPDWTSSIKIQPSNTLELLVTASNHSDSLEIWVTDKPPKPSLSAWPST
                     MFKLGKDITLQCRGPLPGVEFVLEHDGEEAPQQFSEDGDFVINNVEGKGIGNYSCSYR
                     LQAYPDIWSEPSDPLELVGAAGPVAQECTVGNIVRSSLIVVVVVALGVVLAIEWKKWP
                     RLRTRGSETDGRDQTIALEECNQEGEPGTPANSPSSTSQRISVELPVPI"
ORIGIN      
        1 gtccttagac agctcttctc atgccgggca gtttgctgca tctggaggag ctcactggag
       61 aatctccaac atcggagcgg gccttcaact accatcccac cacctgctga ggagaaaaat
      121 tcttcaagac tcagagcaca cagccagcac cagaggcccc atgaccctgg acagaccagg
      181 ggagggggcc accatgctga agacattcac tgttttgctc ttttgcattc ggatgagtct
      241 gggtatgaca tcaatagtga tggaccctca accagagttg tggatagagt ccaactaccc
      301 ccaggcccct tgggagaaca tcacgctttg gtgccgaagc ccctctcgga tatcaagcaa
      361 gttcctgctg ctgaaggata agacacagat gacctggatc cgcccttccc acaagacctt
      421 ccaagtttca ttccttatag gtgcccttac tgagtccaat gcaggtcttt accggtgctg
      481 ctactggaag gagacaggct ggtcaaagcc cagtaaagtt ctagagttgg aggcaccagg
      541 ccaactgccc aagcccatct tctggattca ggctgagacc cccgctcttc ctgggtgtaa
      601 tgttaacatc ctctgccatg gctggctgca ggatttggta ttcatgctgt ttaaagaggg
      661 atatgcagag cctgtggatt accaagtccc aactgggaca atggccatat tctccattga
      721 caacctgaca cctgaggatg aaggggttta catctgccgc actcatatcc agatgctccc
      781 caccctgtgg tcagagccca gcaaccccct gaagctggtt gtagcaggac tctaccccaa
      841 accaactttg acagcccatc ctgggcccat catggcacct ggagaaagcc tgaatctcag
      901 gtgccaaggg ccaatctatg gaatgacctt tgctctaatg agggttgaag acttggagaa
      961 gtccttttac cacaagaaga caataaaaaa tgaggcaaat ttcttcttcc agtctttgaa
     1021 gatccaagat actggacatt acctctgttt ttactatgac gcatcatata gaggttcact
     1081 ccttagtgat gtcctgaaaa tctgggtgac tgacactttc cccaagacct ggctacttgc
     1141 tcggcccagt gctgtggtcc aaatgggtca gaatgtgagc ctacggtgtc gaggaccagt
     1201 ggatggagtg ggtcttgcac tctataagaa aggagaagac aaaccacttc aatttttgga
     1261 tgccaccagc atcgatgaca acacatcatt cttcctcaac aatgtaacct acagtgatac
     1321 tggcatctat agctgccact atcttctcac ctggaagacc tccattagga tgccatcaca
     1381 caacactgtg gagcttatgg ttgtagataa gccccccaaa ccctccctgt cagcttggcc
     1441 aagcactgtg ttcaagctag gaaaggccat cacccttcag tgccgagtat ctcatccagt
     1501 actggaattt tctctggaat gggaagaaag agaaacattc caaaaattct cagtaaacgg
     1561 agacttcatc atcagtaatg ttgacgggaa aggcacaggg acctacagtt gcagctatcg
     1621 cgtagagaca catcctaaca tctggtcaca tcgcagtgag cccctgaagc tgatggggcc
     1681 agcaggctat ctcacctgga attacgttct gaatgaagct atcaggttgt ctctaatcat
     1741 gcagcttgtt gccttgctgt tggtagtgct gtggataagg tggaagtgtc ggagactcag
     1801 aatcagagaa gcctggttgc tgggaacagc tcaaggggtc accatgctct tcatagtcac
     1861 ggcccttctc tgctgtggac tgtgcaatgg ggtattgata gaagagactg aaatagtcat
     1921 gccaacccct aagcctgagc tgtgggcaga gaccaacttt cctctggccc cgtggaagaa
     1981 cttaaccctc tggtgcagaa gcccttctgg ctcaactaag gagtttgtgt tgctgaagga
     2041 tgggaccggg tggatcgcca ctcgcccggc ctcagagcag gtccgggctg ccttccccct
     2101 tggcgccctg acccagagcc acaccgggag ctaccactgc cattcatggg aggagatggc
     2161 tgtatcggag cccagtgagg cacttgagct ggtggggaca gacatcctcc ccaaacctgt
     2221 catttctgct tcccccacaa tccggggcca ggaactacaa ctccggtgca aaggatggct
     2281 ggcaggcatg gggtttgctc tgtataagga gggagagcaa gaacctgtcc agcaacttgg
     2341 tgctgttgga agagaagcct tctttacaat ccagagaatg gaggataaag acgaaggcaa
     2401 ttacagctgc cgcactcaca ctgaaaaacg ccccttcaag tggtctgagc ccagtgagcc
     2461 gctggagctt gtcataaaag aaatgtaccc taagcccttc ttcaagacat gggccagccc
     2521 tgtggtcacc cctggtgccc gagtgacttt caattgctcc accccccacc agcatatgag
     2581 ctttattctt tacaaagatg gaagtgaaat agcatccagt gacaggtcct gggcaagtcc
     2641 gggggccagt gcagctcact ttctaatcat ttcggtgggc attggtgatg gagggaatta
     2701 cagctgccga tattatgact tttctatctg gtctgagccc agcgaccctg tggagctcgt
     2761 ggtgacagaa ttctacccca aacccactct cctggcacag ccaggtcctg tggtgtttcc
     2821 tgggaagagt gtgatcctgc gctgccaagg gactttccag ggcatgaggt tcgccctctt
     2881 gcaggaggga gcccatgttc ccttacagtt tcggagtgtc tcagggaact cagctgactt
     2941 ccttctccac actgttggag cagaggactc tgggaactat agctgtatct actatgagac
     3001 aaccatgtca aacagggggt catatctcag tatgcccctt atgatctggg tgactgacac
     3061 attccctaag ccatggttgt ttgctgagcc cagttctgtg gttcccatgg ggcagaatgt
     3121 tactctctgg tgccgagggc cggtccatgg agtaggatac attctgcaca aagaaggaga
     3181 agccacttca atgcagctct ggggatccac cagtaatgac ggggcattcc ccatcaccaa
     3241 tatatctggt actagcatgg ggcgttacag ctgctgctac caccctgact ggaccagttc
     3301 tatcaagata caacctagca acaccctgga actcctagtc acagcttcaa atcacagtga
     3361 ctccctggag atctgggtga ctgataagcc ccctaaaccc tctctgtcag cctggcccag
     3421 caccatgttc aagttaggga aggacatcac ccttcagtgc cgaggacccc tgccaggtgt
     3481 tgaatttgtc ctagaacatg atggagaaga agcacctcag cagttttcag aggatggaga
     3541 ctttgtcatc aacaacgtag aaggaaaagg cattggaaac tacagctgca gctaccgcct
     3601 ccaggcctac cctgatatct ggtcagagcc tagtgatccc ctggagctgg tgggggcagc
     3661 agggcctgtt gctcaggagt gcactgtagg gaacattgtc cgaagtagcc taatcgtggt
     3721 ggttgttgta gccttggggg tagtgctagc catagagtgg aagaagtggc ctcgactgcg
     3781 aaccagaggc tcagagacag acggaagaga ccagaccatt gcccttgaag agtgtaacca
     3841 agaaggagaa ccaggcaccc ctgccaattc tccttcatca acctctcaga gaatctctgt
     3901 ggaactgccc gttccaatat aataatctcc tcctttacaa gagctttcct ctcctctctc
     3961 ttgctctcag agacctataa atccaaccag ttaccctgca agtcagcccc atctgctgtt
     4021 ccttggtctc taatcacctg agctgggtaa aggggattct gggagttgag agctctgcca
     4081 gggtgagatg tttcctgaag agaggttccc cacccctgta actcctcact gtactgattt
     4141 actggcgcat gaaattctat taaaaatgca ttcttctgaa taaaaagagt attcactatt
     4201 taacttcaaa aa
//
