LOCUS       XM_047433360            7542 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens homer scaffold protein 2 (HOMER2),
            transcript variant X11, mRNA.
ACCESSION   XM_047433360
VERSION     XM_047433360.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000015.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7542
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
     gene            1..7542
                     /gene="HOMER2"
                     /gene_synonym="ACPD; CPD; DFNA68; HOMER-2; VESL-2"
                     /note="homer scaffold protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 6 ESTs, 148 long SRA reads, and 92% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     11 samples with support for all annotated introns"
                     /db_xref="GeneID:9455"
                     /db_xref="HGNC:HGNC:17513"
                     /db_xref="MIM:604799"
     CDS             358..1350
                     /gene="HOMER2"
                     /gene_synonym="ACPD; CPD; DFNA68; HOMER-2; VESL-2"
                     /codon_start=1
                     /product="homer protein homolog 2 isoform X8"
                     /protein_id="XP_047289316.1"
                     /db_xref="GeneID:9455"
                     /db_xref="HGNC:HGNC:17513"
                     /db_xref="MIM:604799"
                     /translation="MPASKQAVTVSYFYDVTRNSYRIISVDGAKVIINSTITPNMTFT
                     KTSQKFGQWADSRANTVFGLGFSSEQQLTKFAEKFQEVKEAAKIAKDKTQEKIETSSN
                     HSQESGRETPSSTQASSVNGTDDEKASHAGPANTHLKSENDKLKIALTQSAANVKKWE
                     IELQTLRESNARLTTALQESAASVEQWKRQFSICRDENDRLRNKIDELEEQCSEINRE
                     KEKNTQLKRRIEELEAELREKETELKDLRKQSEIIPQLMSECEYVSEKLEAAERDNQN
                     LEDKVRSLKTDIEESKYRQRHLKVELKSFLEVLDGKIDDLHDFRRGLSKLGTDN"
     polyA_site      7542
                     /gene="HOMER2"
                     /gene_synonym="ACPD; CPD; DFNA68; HOMER-2; VESL-2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aactaaggct ctccgtgtgg atcgctttgc aacagatcgc ttcttcaaat gctggcacaa
       61 cgcccagagc tcgatgaggt gtgggcaagt agctgtctaa aggtggatga tgccctccat
      121 gcactttcag cctgcctggt ggctgggcag tcgaaaacgt cgccgtctat taagctcctt
      181 tgattgggag caggtgacgg gtagagacgg aagttctggg aatcaccgga gaagggaggg
      241 aagggctcct tccggccgcc tgctcccgga gtcttcgtgg ggaacgtgag agaacagccc
      301 atcttcacca cccgagcgca tgtcttccag attgacccca acaccaagaa gaactggatg
      361 cctgcgagca agcaggcggt caccgtttcc tacttctatg atgtcacaag gaacagctat
      421 cggatcatca gtgtggacgg agccaaggtg atcataaaca gcacaatcac accgaatatg
      481 accttcacca aaacgtcaca gaagtttggg cagtgggccg acagcagagc caacacagtg
      541 tttggtttgg ggttttcctc tgagcagcag ctgacaaagt ttgcagagaa attccaggag
      601 gtgaaagaag ctgccaagat agccaaagac aagacgcagg agaaaatcga gacctcaagt
      661 aatcattccc aagaatctgg gcgtgaaacc ccatcttcta ctcaggcatc cagtgtcaac
      721 gggacggacg atgaaaaggc ctctcacgcc ggtccagcca acacacacct gaagtctgag
      781 aatgacaagc tgaagattgc cttgacgcag agcgcagcca acgtgaagaa gtgggagatc
      841 gagctgcaga cccttcggga gagcaatgca cggctgacca cagcactgca ggagtcggca
      901 gccagtgtgg agcagtggaa gaggcagttc tccatctgcc gtgatgagaa tgaccggctc
      961 cgcaacaaga ttgatgagct ggaagaacaa tgcagtgaga tcaacagaga gaaggagaag
     1021 aacacgcagc tgaagaggag gatcgaggag ctggaggcag agctccgaga aaaggagaca
     1081 gagctgaaag atctccgaaa acaaagtgaa atcatacctc agctcatgtc agagtgcgaa
     1141 tatgtctctg agaagctaga ggcggcagag agagacaatc aaaacctgga agacaaagtg
     1201 cgttccttaa agacagacat tgaggagagc aaataccgac agcgccacct gaaggtggag
     1261 ttgaagagct tcctggaggt gctggacggg aagattgacg acctgcatga cttccgccga
     1321 gggctctcca agctgggcac cgataactag ggctggccga ggcccaggcc ccgccctggc
     1381 cctggagcaa cctggacggt gttcccttga gctggtgtga cgtgccctcg tttattctga
     1441 catccagccc agtctcagta ctgttgtcat aaccttacgc cagactcagg cagaatgtaa
     1501 gccattcact cgtgagcatc gcagccgctt gtgctgcctg gaagctgcag ggccaggact
     1561 gcattttcag tttgcaattg aggtctcctg attttggtgt ttccaagact ggctgctata
     1621 ccttgataag ctttccttct gcctccatga aacctggtgt ctaaaaaaga tcaactaaaa
     1681 cttggaaccc tttaaccaag aggaccttta aaaataacct ttcattccag tcaagaccca
     1741 gctggatgca ttttaaagtt gggagtggcg aggaagcctt cctagtgccg cccggggaat
     1801 gtaaaaccac cagagcaaca ggttgggaca gtatggtcag gccttggagg gaaagagaac
     1861 cagtatccac acaagacctc gaacttgtgt ggcccctcag tttcatctct cctgcctgcc
     1921 atcacattag actttaattg ggtgagagaa cagggcagag actgtcacct gcattttgca
     1981 gatgggaagt agagacagag aaagtgacac gcccagggtc acccagcggt gaccagcagc
     2041 gtggactctg catccaggtc tcctggacct tgatgcagta tcttttgaga catgccactc
     2101 tagtcccttt ggtgacccgt gggtgccaag agaaaataat tcttatatcc tgataagagc
     2161 atattacaat tatattattt caatatgtgt ccacagcaaa ggacagttta caaaaatgtg
     2221 aatccgaatg acatttagga atgtttgtta taaatgataa gttccacttt ggaatgattc
     2281 tggttttgca ggaatctttc caagaaagtt ggttaaaatg atgtctctgc ctgtgaggcc
     2341 agttctatgg aaaacaaaca caccctgagt tctttattga tggctttagt ggaggcagag
     2401 cagtatgttc aaaacaagtg ggaggccctg agatcgcagg aatggaaaca gagttctggc
     2461 tgggggtggc ctgtccactg cccgcccctt cctggagatg cactcctttc tggctttctg
     2521 gggagggagc agccttgctc agtggtggga gcagcttgaa cgggacctga tcaacaccca
     2581 ggaagactgt gcacagaggg cagttggtct ccagcctgca ggctccatga gcacagcctt
     2641 gatggtggtg ggcaggcgcc tgcctgctgt ggactacatt tgatgcaaaa catcaagtaa
     2701 agggtggagc gtaatacagt gaatatgcct cccagaaaca tcatgctctg cctattttaa
     2761 cagggctctt tttctttaga aaagtctcct tctctataga aaccagggac aattttggat
     2821 gagagccaac cacaggacgc gctggggacg ttatggtggg acctcacatg tggccaggtg
     2881 cacctttggg aagaaggcag acgtgatgtg acttagcaca ggcactcaaa agaggcagcc
     2941 actggtcttt gctaatatcc agaagtggat tgtttgttcc attcatcctt ctagaagcta
     3001 aattctttca ttgccttgag acatcactag attttgaagc acttgcaaac tagaagcttg
     3061 caagatcaat gtccatgtat atttttaaag atatgcatgc tttaaaagga ccctaatttc
     3121 tgagtacatg gcttccccaa agaaacagta tatattctgg agatgatggg ggttttggca
     3181 tggagaggga ctcctgtcta gtctagaaaa tgttacttac atgcctcttc catgtaccga
     3241 tctcaagaat atgggttttc tagttggctt taaacactac ccaggcagga aggtggcttt
     3301 ggtaagaatt ttgagctgga tgaaatgttc tagtgaactt acgactgtgt atgtgcgcac
     3361 gcgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgaagaa acagcaaaag
     3421 gggaagtggg agaaacagta aggaagcgtt tttaattaaa aatatgtata cctaagagga
     3481 gactttattt tctatttctg gtggtggtga tctatgttct ggaatccatt taccagaagt
     3541 ttgtggatct tttgtttgaa gtggaattgt tcagtgccct actctctttg acggtgcaga
     3601 gccttgcggc aaagtgttct cctgggccct agagaccccc agggcacctg gcaggagccc
     3661 gtaaaccacg gcagagtccc aagtggtgca tgttttggcg agtgatgggc aggactgatg
     3721 attcacagct gtgaggctgt gctattgttt ttaccctctt gtactgcttt taataggaag
     3781 tcccgacttt acgtcagttg tgagagcagc gtcttatgat gtgacaggca agaagacatt
     3841 ccttgcatca aatataagag tttaatgaga agagtggagt ggataagtga actctcccaa
     3901 gagtactgtt ttttgtttcc ctttttaaat gctttcttgg tacataaata atataatact
     3961 ttttttaaag aaattccaga tgagtgggaa aaaaaccaat cacctgttat tacactatct
     4021 gattataacc actgttaaca tttcagtttt tatcttttca gacttttttc tatgcatctg
     4081 tgtgtgtttt attacttttt ccatgaaata taatcatatt atacatactg ttttataact
     4141 tttatccctt ttaatgctat attgtgaata gatttctata tcagtaaata tgtaattaca
     4201 ttatttttaa cctctatgta ggttgtacct tggatactta ggttgtttcc aattttttta
     4261 ctgttgtagt caaggacata atgaagttct tctaacatcc ttgcgaactt ttcagaatat
     4321 tgacttaggg taattttctg aagttatcac tggctcaaaa gtacgcgcct ccctatctgc
     4381 ggctcctttc cttctgaggc atacaggact tcaccctcca tcccccttgt actcattcag
     4441 ggtcctatga ctaattctgg ccaatgaaat gtgagcacag gtgacacatg aagctccaga
     4501 cagacactga aatgcccatg agcagttccg cagtgtctgc cttcccttcc ctcagcaaat
     4561 gctgatgtcc cagggacaga gcctctgtca agcctggatc cctgagtgac tacgtggagc
     4621 agcccccttc tcccttcatg ttaccctcac ctgccaccct gcatggacgg gtagcatgaa
     4681 taaaaaaaat aaaccttagg tgttaaacac tggggtttca gggttaattg gttaactgca
     4741 gcataacata tcctgttgca acaataaaaa agaatgcaca tttttaggac ttgtaatatg
     4801 tattgcctca aattgccttc cagaaagaca gacccaatta tactcccacc cacagtgtgt
     4861 gagtgtgtac tgcttcctct ttaacactgg agttaccctg gggacagaga gctaaaaaaa
     4921 atattttttt ggttaaaatg taacccttta aggtgttcag cagtatcatt gatttctaag
     4981 aggtttattt cataaacatt gtaaaacaaa attttaagtt gcacgtatgg ctttttaaaa
     5041 acgtttagac atttaaaaaa acacctttta gtcaagttta tctgttactt tttttttttt
     5101 ttttaatggt tgctacctat gccgtcatgc ttatgcaggt ctttccaatt cttttttttt
     5161 tttttttttt tttttttttt tgagacgggg tccaccctgg cccccaggct ggagtgcagt
     5221 ggcgtgatct cagctcactg caacctgcgc ctcccgggtt caagcgattc tcatgtgtca
     5281 acctccctcc tgagtagctg ggactacaag tgtatgccac cacgcccagg taactttttg
     5341 tttttagtag agatgggttt cgccatgttg cctaggctgg tctcgaactc ctgaactcag
     5401 gcaatccaca cgccttggcc tcccaaagtg ctggaattac aggtgtgagc caccaagccc
     5461 ggcgaggtct tcccaattct gatggcaagg ttgtataaat attcaccact atcttattct
     5521 tgtactttta ttatttcttt ctaaacagtt aaatctgtga tctggctggg cgtgttggct
     5581 cttgcctgta atcccaacac tttgggtcgc caaggtggaa ggatcacttg agtccaggca
     5641 tttgaggtta cagtgagctt tgatggcacc ggtgcactcc agcctgggga acagagcaag
     5701 accctgtctc taaaaaaaat tttaaaaacc tctgatctat ctggaatgta ttttctaaat
     5761 taccccaaca ctgtttattg ggaagtctgt cctttattct atatgaaatc ccatttttgc
     5821 catacaccta gtagcccttc tgttgggtgc caggataagc accctggcct tgagtgtgct
     5881 gtgaactctt tattatgggt tgtgatcttc ctgcacattc tagcactggt accacattgt
     5941 ttggatcgcc atagctttgg actaaacttc cccattaaac tttttcaaaa cttgcctagt
     6001 atattgtgca ggccgggcat ggtggctcac gcctgtaatc ccagcacttt gggaggccaa
     6061 ggtggatgga tcacctgaga tcaggagttc gagaccagcc tggataacat ggcgaaaccc
     6121 catctctact aaaaatacaa aaaaaaaaaa aaaaaaaaaa aattagctgg ctgtggtgat
     6181 aggaacctgt aatctcagct acttgggagg ctgaggcagt gaacccagga ggcagaggtt
     6241 gcagtgagct gagatagcac cagcctgggc aacggagcga gactctgtct caaaaaaaca
     6301 aaaaacaaaa caaaaaaaaa accttccaaa agaagtttga gataatttta tgtttagaaa
     6361 aattagaaat tggattgagt aaaatttaca tattttacac aagaggacta acatctttat
     6421 aatatttaac ctttcagtaa atttatgttt tatgtttctc agcctatctt ttctagtata
     6481 ggtgattttt ttagtgtggt tactattgta aatgagatcc tactacttta aaaaatgaaa
     6541 attaaatcta tcgcttttat gactttaaaa cattagactt atgtaagtgt aaacattatt
     6601 taaaaacata atgtagaaaa ttaaagtccc ccataattaa aatccctttc ccccagaaaa
     6661 agtcaacagc atattcatca gttttttcct aaagtatgtt ttagcacttt gaccatatga
     6721 gacaaccctt ctgctgttag catttttctc tttgcaatag atcttcctat gtcagtacac
     6781 atcaatctac ctcattctta cctctgcata agagagtagt gtgtagttgt ataatagttt
     6841 aacttggcga ttggttattg attttgtaac tagccagtta ctgaattatt ctaaaggttt
     6901 tgctgttgtt aatttctttc gcctttttca gttgggtaat agttctgggt aggttgataa
     6961 ttttattccc atatttgtaa tcttatttca ctttctcaac tcatcacatt gactggtact
     7021 tttagaacaa tgttaaaaaa catttacata attgtgctga tattgtacat tatttgatat
     7081 atatatatca aatttttttt acttagaaga gtgtttctcc aaaactataa atttgactct
     7141 tagtgtaaaa taatcttaat atttgaatta tacattcagg ttatgccctc tatttctagt
     7201 ttgatgaaaa tattattagt aatggatgtt ggggttttat taaatggctt ttttccacat
     7261 ctgtcaagat gatcaactgg cttttctcta ttatgacttt agatgaatcg ttttaataga
     7321 tttgctaatg ttaagacatc tctgcatttc tacaagaatc tgatgtagtc atagtatact
     7381 attcttttaa tatacatctc ctttcaatgt taacagtggt tatttatgat tggttggtcc
     7441 atagtagatt tttattttgt gtttcttatc tgtactttct gatttttcta caaagattgt
     7501 gtattacttg tataataaaa ataagagctt taaattgtga aa
//
