LOCUS       NM_001136561            1156 bp    mRNA    linear   PRI 19-SEP-2024
DEFINITION  Homo sapiens heterogeneous nuclear ribonucleoprotein C like 2
            (HNRNPCL2), mRNA.
ACCESSION   NM_001136561 XM_001714578 XM_001720694 XM_001721509 XM_001726972
VERSION     NM_001136561.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1156)
  AUTHORS   Huttlin,E.L., Bruckner,R.J., Navarrete-Perea,J., Cannon,J.R.,
            Baltier,K., Gebreab,F., Gygi,M.P., Thornock,A., Zarraga,G., Tam,S.,
            Szpyt,J., Gassaway,B.M., Panov,A., Parzen,H., Fu,S., Golbazi,A.,
            Maenpaa,E., Stricker,K., Guha Thakurta,S., Zhang,T., Rad,R.,
            Pan,J., Nusinow,D.P., Paulo,J.A., Schweppe,D.K., Vaites,L.P.,
            Harper,J.W. and Gygi,S.P.
  TITLE     Dual proteome-scale networks reveal cell-specific remodeling of the
            human interactome
  JOURNAL   Cell 184 (11), 3022-3040 (2021)
   PUBMED   33961781
REFERENCE   2  (bases 1 to 1156)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   3  (bases 1 to 1156)
  AUTHORS   Fasci,D., van Ingen,H., Scheltema,R.A. and Heck,A.J.R.
  TITLE     Histone Interaction Landscapes Visualized by Crosslinking Mass
            Spectrometry in Intact Cell Nuclei
  JOURNAL   Mol Cell Proteomics 17 (10), 2018-2033 (2018)
   PUBMED   30021884
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC144551.1 and BC157858.1.
            
            On Apr 4, 2014 this sequence version replaced NM_001136561.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC144551.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000621994.3/ ENSP00000479203.2
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1148              BC144551.1         1-1148
            1149-1156           BC157858.1         1001-1008
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
                     /map="1p36.21"
     gene            1..1156
                     /gene="HNRNPCL2"
                     /gene_synonym="HNRNPCP5"
                     /note="heterogeneous nuclear ribonucleoprotein C like 2"
                     /db_xref="GeneID:440563"
                     /db_xref="HGNC:HGNC:48813"
     exon            1..62
                     /gene="HNRNPCL2"
                     /gene_synonym="HNRNPCP5"
                     /inference="alignment:Splign:2.1.0"
     exon            63..1156
                     /gene="HNRNPCL2"
                     /gene_synonym="HNRNPCP5"
                     /inference="alignment:Splign:2.1.0"
     CDS             244..1125
                     /gene="HNRNPCL2"
                     /gene_synonym="HNRNPCP5"
                     /note="heterogeneous nuclear ribonucleoprotein C
                     pseudogene 5; hnRNP C-like-2"
                     /codon_start=1
                     /product="heterogeneous nuclear ribonucleoprotein C-like
                     2"
                     /protein_id="NP_001130033.3"
                     /db_xref="CCDS:CCDS76105.1"
                     /db_xref="GeneID:440563"
                     /db_xref="HGNC:HGNC:48813"
                     /translation="MASNVTNKMDPHSVNSRVFIGNLNTLVVKKSDVEAIFSKYGKIA
                     GCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVAVINLAAEPKVNRGNAGVKRSAA
                     EMYGSSFDLDYGFQRDYYDGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGF
                     NSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEQSKQEVEVKNA
                     KSEEEQSSSSMKKDETHVKMESEGGAEDSAEEGDPLDDDDNEDQGDNQLHLIKNNEKD
                     AEEGEDNRDSTNGQDDS"
ORIGIN      
        1 cctggagttc ctgcttggct cttcctgagg tctgagcacc ttctaaacta caaccagatc
       61 tgaattcttg ttggcagcca ttttgtgaag agacgaagac tgagctgttt tggctgcatt
      121 tctggcctcg agccgcagtc agtttctccc cgtagaaccc ggcagtagga gacttagaat
      181 cgaatctctt ctccctcccg cctcctgttt ttggcttttt gagaaacctt atcatccaac
      241 acaatggcca gcaacgttac caacaagatg gatcctcact ccgtgaactc ccgtgtgttc
      301 attgggaatc tcaacactct tgttgtcaag aaatctgatg tggaggcgat cttttccaag
      361 tatggcaaaa ttgcgggctg ctctgttcat aagggctttg ccttcgttca atatgataag
      421 gagaaaaatg cccgggctgc tgtagcagga gaggatggca gaatgattgc tagccaggtt
      481 gcagttatta acctggctgc agagccaaaa gtgaaccgag gaaacgcagg tgtgaaacga
      541 tccgcagcgg agatgtacgg ctcctctttt gacttggact atggctttca acgggattat
      601 tatgatggga tgtacagttt cccagcacgt gtacctcctc ctcctcccat tgctctggct
      661 gtagtgccct cgaaacgcca gcgcatatca ggaaacacct cacgaagggg caaaagtggc
      721 ttcaattcta agagtggaaa gcggggatct tccaagtctg gaaagctgaa aggagatgac
      781 cttcaggcca ttaagcagga gttgacccag ataaaacaga aagtggattc tctcctggaa
      841 aacctggaaa aaattgaaaa ggaacagagc aaacaagagg tagaggtgaa aaatgctaag
      901 tcagaagagg agcagagcag tagctccatg aagaaagatg agactcatgt aaagatggag
      961 tctgaggggg gtgcagaaga ctctgctgag gagggggacc cactggatga tgatgataat
     1021 gaagatcagg gggacaacca gcttcatttg atcaagaata atgaaaaaga tgctgaggaa
     1081 ggagaggata acagagacag caccaatggc caggatgact cttaagcaca tagtggggtt
     1141 gagaaatctt atccca
//
