LOCUS       NM_001013631            1134 bp    mRNA    linear   PRI 21-SEP-2024
DEFINITION  Homo sapiens heterogeneous nuclear ribonucleoprotein C like 1
            (HNRNPCL1), mRNA.
ACCESSION   NM_001013631 XM_291395
VERSION     NM_001013631.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1134)
  AUTHORS   Huttlin,E.L., Bruckner,R.J., Navarrete-Perea,J., Cannon,J.R.,
            Baltier,K., Gebreab,F., Gygi,M.P., Thornock,A., Zarraga,G., Tam,S.,
            Szpyt,J., Gassaway,B.M., Panov,A., Parzen,H., Fu,S., Golbazi,A.,
            Maenpaa,E., Stricker,K., Guha Thakurta,S., Zhang,T., Rad,R.,
            Pan,J., Nusinow,D.P., Paulo,J.A., Schweppe,D.K., Vaites,L.P.,
            Harper,J.W. and Gygi,S.P.
  TITLE     Dual proteome-scale networks reveal cell-specific remodeling of the
            human interactome
  JOURNAL   Cell 184 (11), 3022-3040 (2021)
   PUBMED   33961781
REFERENCE   2  (bases 1 to 1134)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   3  (bases 1 to 1134)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC245034.2.
            
            On Nov 27, 2019 this sequence version replaced NM_001013631.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC137258.1, BE379349.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2145743, SAMEA2149178
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000317869.7/ ENSP00000365370.4
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-40                AC245034.2         105665-105704
            41-1134             AC245034.2         105915-107008
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
                     /map="1p36.21"
     gene            1..1134
                     /gene="HNRNPCL1"
                     /gene_synonym="HNRPCL1"
                     /note="heterogeneous nuclear ribonucleoprotein C like 1"
                     /db_xref="GeneID:343069"
                     /db_xref="HGNC:HGNC:29295"
     exon            1..40
                     /gene="HNRNPCL1"
                     /gene_synonym="HNRPCL1"
                     /inference="alignment:Splign:2.1.0"
     exon            41..1134
                     /gene="HNRNPCL1"
                     /gene_synonym="HNRPCL1"
                     /inference="alignment:Splign:2.1.0"
     CDS             222..1103
                     /gene="HNRNPCL1"
                     /gene_synonym="HNRPCL1"
                     /note="hnRNP C-like-1; hnRNP core protein C-like 1"
                     /codon_start=1
                     /product="heterogeneous nuclear ribonucleoprotein C-like
                     1"
                     /protein_id="NP_001013653.1"
                     /db_xref="CCDS:CCDS30591.1"
                     /db_xref="GeneID:343069"
                     /db_xref="HGNC:HGNC:29295"
                     /translation="MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIA
                     GCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAA
                     EMYGSSFDLDYGFQRDYYDGMYSFPARVPPPPPIALAVVPSKRQRLSGNTSRRGKSGF
                     NSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEQSKQEVEVKNA
                     KSEEEQSSSSMKKDETHVKMESEGGAEDSAEEGDPLDDDVNEDQGDDQLELIKDDEKE
                     AEEGEDDRDSTNGQDDS"
ORIGIN      
        1 ctacaactac aaccagaggt ctaaactaca accagatctg aattcttgtt gggagccatt
       61 ttgtgaagag acgaagactg agctgttttg gctgcatttc tggcctcgag ccgcagtcag
      121 tttctccccg tagaacccgg cagtaggaga cttagaatcg aatctcttct ccctcccgcc
      181 tcctgttttt ggctttttga gaaaccttat catccaacac aatggccagc aacgttacca
      241 acaagatgga tcctcactcc atgaactccc gtgtgttcat tgggaatctc aacactcttg
      301 ttgtcaagaa atcggatgtg gaggcgatct tttccaagta tggcaaaatt gcgggctgct
      361 ctgttcataa gggctttgcc ttcgttcaat atgataagga gaaaaatgcc cgggctgctg
      421 tagcaggaga ggatggcaga atgattgcta gccaggttgt agatattaac ctggctgcgg
      481 agccaaaagt gaaccgagga aacgcaggtg tgaaacgatc agcagcggag atgtacggct
      541 cctcttttga cttggactat ggctttcaac gggattatta tgatggaatg tacagtttcc
      601 cagcacgtgt acctcctcct cctcccattg ctctggctgt agtgccctcg aaacgtcaac
      661 gtctatcagg aaacacctca cgaaggggca aaagtggctt caattctaag agtggaaagc
      721 ggggatcttc caagtctgga aagttgaaag gtgatgacct tcaggccatt aagcaggagt
      781 tgacccagat aaaacagaaa gtggattctc tcctggaaaa cctggaaaaa attgaaaagg
      841 aacagagcaa acaagaggta gaggtgaaaa atgctaagtc agaagaggag cagagcagta
      901 gctccatgaa gaaagatgag actcatgtga agatggagtc tgaggggggt gcagaagact
      961 ctgctgagga gggggaccca ctggatgatg atgttaatga agatcagggg gatgaccagc
     1021 tggagttgat caaggatgat gaaaaagagg ctgaggaagg agaggatgac agagacagca
     1081 ccaatggcca ggatgactct taagcacata gtggggttga gaaatcttat ccca
//
