LOCUS       XM_011514561            1077 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens major histocompatibility complex, class II,
            DQ beta 2 (HLA-DQB2), transcript variant X3, mRNA.
ACCESSION   XM_011514561
VERSION     XM_011514561.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000006.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011514561.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
     gene            1..1077
                     /gene="HLA-DQB2"
                     /gene_synonym="DQB2; HLA-DQB1; HLA-DXB"
                     /note="major histocompatibility complex, class II, DQ beta
                     2; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 1 EST, 19 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 14 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:3120"
                     /db_xref="HGNC:HGNC:4945"
                     /db_xref="MIM:615161"
     CDS             63..722
                     /gene="HLA-DQB2"
                     /gene_synonym="DQB2; HLA-DQB1; HLA-DXB"
                     /codon_start=1
                     /product="HLA class II histocompatibility antigen, DQ beta
                     2 chain isoform X3"
                     /protein_id="XP_011512863.1"
                     /db_xref="GeneID:3120"
                     /db_xref="HGNC:HGNC:4945"
                     /db_xref="MIM:615161"
                     /translation="MALQIPGGFWAAAVTVMLVMLSTPVAEARDFPKDFLVQFKGMCY
                     FTNGTERVRGVARYIYNREEYGRFDSDVGEFQAVTELGRSIEDWNNYKDFLEQERAAV
                     DKVCRHNYEAELRTTLQRQVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFR
                     NDQEETAGVVSTSLIRNGDWTFQILVMLEITPQRGDIYTCQVEHPSLQSPITVEWRLL
                     H"
ORIGIN      
        1 attaggtttg agctgtgttg actaccactg ctttttcctt ggtctcactt acgtcttgga
       61 agatggctct gcagatccct ggaggctttt gggcagcagc tgtgaccgtg atgctggtga
      121 tgctgagcac cccagtggct gaggccagag actttcccaa ggatttcttg gtccagttta
      181 agggcatgtg ctacttcacc aacgggacag agcgcgtgcg cggtgtggcc agatacatct
      241 ataaccgcga ggagtacggg cgcttcgaca gcgacgttgg ggagttccag gcggtgaccg
      301 agctggggcg gagcatcgag gactggaaca actataagga cttcttggag caggagcggg
      361 ccgcggtgga caaggtgtgc agacacaact acgaggcgga gctgcgcacg accttgcagc
      421 ggcaagtgga gcccacagtg accatctccc catccaggac agaggccctc aaccaccaca
      481 acctgctggt ctgctcggtg acagatttct atccagccca gatcaaagtc cggtggtttc
      541 ggaatgacca ggaggagaca gccggtgttg tgtccacctc cctcattagg aatggtgact
      601 ggaccttcca gattctggtg atgctggaaa taactcccca gcgtggagac atctacacct
      661 gccaagtgga gcaccccagc ctccagagcc ccatcaccgt ggagtggcga ctcctgcact
      721 gactcctgag gacttttgtc tgggattggt catcactctt ctgtaatgcc cacctgcccc
      781 tgcccagaat tcctagctgc ctgtgtcacc ctgtcccact gaggtcagag tcctacagtg
      841 gctcatgcag ccacaggtca ccttctgtga tccccatccc aaggcactgg tggtgactct
      901 gcttcctgca ctgacccaga gcctctgcct gtgcactgca agctgtgtct actcaggccc
      961 caaggggcat ctctgtttcc attctccccc cacagacctg tcaagagaag catgacaaac
     1021 aaaatcattt acctgacttt agtgcttttt cccataatta aacctgattc tgagtta
//
