LOCUS       XM_047442061            7223 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens host cell factor C1 (HCFC1), transcript
            variant X15, mRNA.
ACCESSION   XM_047442061
VERSION     XM_047442061.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000023.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7223
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
     gene            1..7223
                     /gene="HCFC1"
                     /gene_synonym="CFF; HCF; HCF-1; HCF1; HFC1; MAHCX; MRX3;
                     PPP1R89; VCAF; XLID3"
                     /note="host cell factor C1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 84
                     ESTs, 1015 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     24 samples with support for all annotated introns"
                     /db_xref="GeneID:3054"
                     /db_xref="HGNC:HGNC:4839"
                     /db_xref="MIM:300019"
     CDS             91..5433
                     /gene="HCFC1"
                     /gene_synonym="CFF; HCF; HCF-1; HCF1; HFC1; MAHCX; MRX3;
                     PPP1R89; VCAF; XLID3"
                     /codon_start=1
                     /product="host cell factor 1 isoform X15"
                     /protein_id="XP_047298017.1"
                     /db_xref="GeneID:3054"
                     /db_xref="HGNC:HGNC:4839"
                     /db_xref="MIM:300019"
                     /translation="MAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAW
                     NNQVCCKDLWYLETEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPAT
                     AATATSPTPNPVPSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTIQV
                     LPTVPGSSISVPTAARTQGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPA
                     GVRMVVPTQSAQGTVIGSSPQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKT
                     MAVTPGTTTLPATVKVASSPVMVSNPATRMLKTAAAQVGTSVSSATNTSTRPIITVHK
                     SGTVTVAQQAQVVTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTS
                     AVTGQASTGPVTQIIQTKGPLPAGTILKLVTSADGKPTTIITTTQASGAGTKPTILGI
                     SSVSPSTTKPGTTTIIKTIPMSAIITQAGATGVTSSPGIKSPITIITTKVMTSGTGAP
                     AKIITAVPKIATGHGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPAV
                     TTLVVKGTTGVTTLGTVTGTVSTSLAGAGGHSTSASLATPITTLGTIATLSSQVINPT
                     AITVSAAQTTLTAAGGLTTPTITMQPVSQPTQVTLITAPSGVEAQPVHDLPVSILASP
                     TTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCETHETGTTNTATTTVVANLGGHPQP
                     TQVQFVCDRQEAAASLVTSTVGQQNGSVVRVCSNPPCETHETGTTNTATTATSNMAGQ
                     HGCSNPPCETHETGTTNTATTAMSSVGANHQRDARRACAAGTPAVIRISVATGALEAA
                     QGSKSQCQTRQTSATSTTMTVMATGAPCSAGPLLGPSMAREPGGRSPAFVQLAPLSSK
                     VRLSSPSIKDLPAGRHSHAVSTAAMTRSSVGAGEPRMAPVCESLQGGSPSTTVTVTAL
                     EALLCPSATVTQVCSNPPCETHETGTTNTATTSNAGSAQRVCSNPPCETHETGTTHTA
                     TTATSNGGTGQPEGGQQPPAGRPCETHQTTSTGTTMSVSVGALLPDATSSHRTVESGL
                     EVAAAPSVTPQAGTALLAPFPTQRVCSNPPCETHETGTTHTATTVTSNMSSNQDPPPA
                     ASDQGEVESTQGDSVNITSSSAITTTVSSTLTRAVTTVTQSTPVPGPSVPKISSMTET
                     APRALTTEVPIPAKITVTIANTETSDMPFSAVDILQPPEELQVSPGPRQQLPPRQLLQ
                     SASTALMGESAEVLSASQTPELPAAVDLSSTGEPSSGQESAGSAVVATVVVQPPPPTQ
                     SEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQA
                     VLQAAQQAVMAGTGEPMDTSEAAATVTQAELGHLSAEGQEGQATTIPIVLTQQELAAL
                     VQQQQLQEAQAQQQHHHLPTEALAPADSLNDPAIESNCLNELAGTVPSTVALLPSTAT
                     ESLAPSNTFVAPQPVVVASPAKLQAAATLTEVANGIESLGVVSRKPDLPPPPSKAPMK
                     KENQWFDVGVIKGTNVMVTHYFLPPDDAVPSDDDLGTVPDYNQLKKQELQPGTAYKFR
                     VAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEY
                     SVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIF
                     RIAARNEKGYGPATQVRWLQETSKDSSGTKPANKRPMSSPEMKSAPKKSKADGQ"
ORIGIN      
        1 acaccctgac gtggaataag cccagtctca gcggggtggc gcctcttcct cgcagtctcc
       61 actcggcaac caccatcgga aataaatacc atggcctggg agaccatcct gatggataca
      121 ctggaggaca acatcccccg tgctcgggct ggccactgcg cagtcgccat caacacccgc
      181 ctgtacattt ggagtgggcg tgacggctac cgcaaggcct ggaacaacca ggtctgctgc
      241 aaggacctct ggtacctaga gacagaaaag ccaccacccc cagcccgagt acaactggta
      301 cgcgccaaca ccaactccct ggaggtgagc tggggggcag tggcaacagc cgacagctac
      361 cttctccagc tccagaaata tgacattcct gccacggctg ctactgccac ctcccctaca
      421 cccaatccgg tcccatctgt gcctgccaac cctcccaaga gccctgcccc agcagcagcc
      481 gcacctgctg tgcagccgct gacccaagta ggcatcacgc tcctgcccca ggctgccccc
      541 gcacccccga ccaccaccac catccaggtc ttgccaacgg tgcctggcag ctccatttct
      601 gtgcccaccg cagccaggac tcaaggtgtc cctgctgttc tcaaagtgac cggtcctcag
      661 gctacaacag gaactccatt ggtcaccatg cgacctgcca gccaggctgg gaaagcccct
      721 gtcaccgtga cctcccttcc cgccggagtg cggatggttg tgccaacaca gagtgcccag
      781 ggaacggtga ttggcagtag cccacagatg agtgggatgg ccgcactggc cgctgcggcc
      841 gctgccaccc agaagatccc cccttcctcg gcacccacgg tgctgagtgt cccagcgggt
      901 accaccatcg tgaagaccat ggctgtgaca cctggcacta ccaccctccc agccactgtg
      961 aaggtggcct cctcgccagt catggtgagc aaccctgcca ctcgcatgct gaagactgca
     1021 gccgcccagg tggggacatc ggtttcctcc gccaccaaca cgtctacccg ccctatcatc
     1081 acagtgcaca agtcaggcac tgtgacagtg gcccagcaag cccaggtggt gaccacagtt
     1141 gtgggcgggg tcaccaagac catcaccctg gtgaagagcc ccatctctgt cccaggaggc
     1201 agtgctctga tttccaatct gggcaaagtg atgtcggtgg tccagaccaa accagttcag
     1261 acttcagcag tcacaggcca ggcgtccacg ggtcctgtga ctcagatcat ccagaccaaa
     1321 gggcccctgc cagcgggaac aatcctgaag ctggtgacct cagcagatgg caagcccacc
     1381 accatcatca ctaccacgca ggccagtggg gcggggacca agcccaccat cctgggcatc
     1441 agcagcgtct cccccagtac caccaagccc ggcacgacca ccatcatcaa aaccatcccc
     1501 atgtcggcca tcatcaccca ggcgggcgcc acgggtgtga ccagcagtcc tggcatcaag
     1561 tcccccatca ccatcatcac caccaaggtg atgacttcag gaactggagc acctgcgaaa
     1621 atcatcactg ctgtccccaa aattgccact ggccacgggc agcagggagt gacccaggtg
     1681 gtgcttaagg gggccccggg acagccaggc accatcctcc gcactgtgcc catggggggt
     1741 gttcgcctgg tcacacccgt caccgtctcc gccgtcaagc cagccgtcac cacgttggtt
     1801 gtgaaaggca ccacaggtgt cacgacccta ggcacagtga caggcaccgt ctccaccagc
     1861 cttgccgggg cggggggcca cagcactagt gcttccctgg ccacgcccat caccaccttg
     1921 ggcaccattg ccaccctctc aagccaggtg atcaacccca ctgccatcac tgtgtcggcc
     1981 gcacagacca cgctgacagc ggcaggcggg ctcacaaccc caaccatcac catgcagccc
     2041 gtgtcccagc ccacccaggt aactctgatc acggcaccta gtggggtgga ggcccagcct
     2101 gtgcatgacc tccctgtgtc cattctggcc tccccgacta cagaacagcc caccgccaca
     2161 gttaccatcg ccgactcagg ccagggtgat gtgcagcctg gcactgtcac cttggtgtgc
     2221 tccaacccac cctgtgagac ccacgagact ggcaccacca acacggccac cactactgtt
     2281 gtggctaacc ttgggggaca cccccagccc acccaagtgc agttcgtctg tgacagacag
     2341 gaggcagctg cttctcttgt gacctcgact gtgggccagc agaatggtag cgtggtccga
     2401 gtctgttcga acccgccctg cgagacccac gagacgggca ccaccaacac cgccaccacc
     2461 gccacctcca acatggccgg gcagcatggc tgctcaaacc caccctgcga gacccacgag
     2521 acgggcacca ccaacactgc cactacagcc atgtcgagcg tcggcgccaa ccaccagcga
     2581 gatgcccgtc gggcctgtgc agctggcacc cctgccgtga tccggatcag tgtggccact
     2641 ggggcgctgg aggcagccca gggctctaag tcccagtgcc aaacccgcca gaccagcgcg
     2701 accagcacca ccatgactgt gatggccacc ggggccccgt gctcggccgg cccactcctt
     2761 gggccgagca tggcacggga gcccgggggc cgcagccctg cttttgtgca gttggcccct
     2821 ctgagcagca aagtcaggct gagcagccca agcattaagg accttcctgc ggggcgccac
     2881 agccatgcgg tcagcaccgc tgccatgacc cgttccagcg tgggtgctgg ggagccccgc
     2941 atggcacctg tgtgcgagag cctccagggt ggctcgccca gcaccacagt gactgtgaca
     3001 gccctggagg cactgctgtg cccctcggcc accgtgaccc aagtctgctc caacccacca
     3061 tgtgagaccc acgagacagg caccaccaac accgccacta cctcgaatgc aggcagcgcc
     3121 cagagggtgt gctccaaccc gccatgcgag acccacgaga cgggcaccac ccacacggcc
     3181 accaccgcta cttcaaacgg gggcacgggc cagcccgagg gtgggcagca gccccctgct
     3241 ggtcgcccct gtgagacaca ccagaccact tccactggca ccaccatgtc ggtcagcgtg
     3301 ggtgccctgc ttcccgacgc cacttcttcc cacaggaccg tggagtctgg cctagaggtg
     3361 gcggcggcac ccagcgtcac cccccaggct ggcaccgcgc tgctggctcc tttcccaaca
     3421 cagagggtgt gctccaaccc cccctgtgag acccacgaga cgggcaccac tcacacggcc
     3481 accactgtca cttccaacat gagttcaaac caagaccccc cacctgctgc cagcgatcag
     3541 ggagaggtgg agagcaccca gggcgacagc gtgaacatca ccagctccag tgccatcacg
     3601 acaaccgtgt cctccacact gacgcgggct gtgaccaccg tgacgcagtc cacaccggtc
     3661 ccgggcccct ctgtgccgaa gatctcatca atgactgaga ctgccccaag ggctctgact
     3721 actgaagtcc ccatcccggc caaaataaca gtgaccatag ccaacacaga aacttctgac
     3781 atgcccttct ctgctgttga catcctgcag cccccagagg aactccaggt gtcgccaggt
     3841 cctcgccagc agctgccgcc acggcagctt ctgcagtcgg cttccacagc cctgatgggg
     3901 gagtccgccg aggtcctgtc agcctcccag acccctgagc tcccggccgc cgtggatctg
     3961 agcagcacag gggagccatc ttcgggccag gagtctgccg gctctgcggt ggtggccact
     4021 gtggtggtcc agccaccccc acccacacag tccgaagtag accagttatc acttccccaa
     4081 gagctaatgg ccgaggccca agctggcacc accaccctca tggtaacggg gctcaccccc
     4141 gaggagctgg cagtgacggc tgctgcagaa gcagctgccc aggccgcagc cacggaggaa
     4201 gcccaggccc tggccatcca ggcggtgctc caggccgcgc agcaggccgt catggcaggc
     4261 accggcgagc ccatggacac ctccgaggca gcagcaaccg tgactcaggc ggagctgggg
     4321 cacctgtcgg ccgagggtca ggagggccag gccaccacca tacccattgt gctgacacag
     4381 caggagctgg ctgccctggt gcagcagcag cagctgcagg aggcccaggc ccagcagcag
     4441 catcaccacc tccccactga ggccctggcc cctgccgaca gtctcaacga cccagccatt
     4501 gagagcaatt gcctcaatga gctggccggc acggtcccca gcactgtggc gctgctgccc
     4561 tcaacggcca ctgagagcct ggctccatcc aacacatttg tggcccccca gccggttgtg
     4621 gtggccagcc cagccaagct gcaggctgca gctaccctga ccgaagtggc caatggcatc
     4681 gagtccctgg gtgtggtgag tcggaagcca gacctgccgc ccccacccag caaagccccc
     4741 atgaagaagg aaaaccagtg gtttgatgtg ggagtcatta agggcaccaa tgtaatggtg
     4801 acacactatt tcctgccacc agatgatgct gtcccatcag acgatgattt gggcaccgtc
     4861 cctgactata accagctgaa gaagcaggag ctgcagccag gcacagccta taagtttcgt
     4921 gttgccggaa tcaatgcctg tggccggggg cccttcagcg aaatctcagc ctttaagacg
     4981 tgcctgcctg gtttcccagg ggccccttgt gccattaaaa tcagcaaaag tccggatggt
     5041 gctcacctca cctgggagcc accctctgtg acctccggca agattatcga gtactccgtg
     5101 tacctggcca tccagagctc acaggctggg ggcgagctca agagctccac cccggcccag
     5161 ctggccttca tgcgggtgta ctgcgggccc agcccctcct gcctggtgca gtcctccagc
     5221 ctttccaacg cccacatcga ctacaccacc aagcccgcca tcatcttccg catcgccgcc
     5281 cgcaatgaga agggctatgg cccggccaca caagtgaggt ggctgcagga aaccagtaaa
     5341 gacagctctg gcaccaagcc agccaacaag cggcccatgt cctctccaga aatgaaatct
     5401 gctccaaaga aatctaaggc cgatggtcag tgagaggaag ctgactagcc cctggattct
     5461 tctccagacc cccctgcttc aggaacaccc gccagggccc acccctccca ccccgtccca
     5521 gcattcgcac ttcaccctcg cgagccgctg ttcactcctc tcccctttct ctttctctct
     5581 gtttttaaaa taatctaaag aaagcacatt ttaccattgc tgttgggagg aagcagaggc
     5641 agatgggaaa gcagagagag gagcgcgctt cctttcctcc ccgctgccgc ccaccctggg
     5701 gagagacttt tgcggggagg gaaggcggag ctgaggacag ccagctccgc cctcccaagg
     5761 ctgtgcgttc ctgagggcca ggtcgggggc aggcatggag gggaggaaag gcgtccctct
     5821 tggccctccc cagagtggct ttcctggcac cctggcctgg gtgtctggtt ctgttttctt
     5881 ttcttcccct tgtgtttcca gtcacctaac ttcccttcct caggctcccc cggcccaccc
     5941 tgctcagtga ccccacagga agcttacaca ttttctcaga ggcctttgtg ctcccacctc
     6001 ttctaccctc cccctcttct ttcccatttt aaaaaagaaa agaaggaaaa agaaaaaagg
     6061 ggcaaggagc cccgcggcgg cctgggcagc gcctgtgcag acctccctgc aggccgcact
     6121 gccaactgct gcatttgttg tgttttttag gttgcaattg gtgaagttca cactttcatt
     6181 gtaattttag cgtgtggggt tttgtccctt ttttgttgtt gttagctgtg tacagaatgt
     6241 gtaatctttt ttcttttctc ttttttttgt tttgttttgt tttgtttttg tttttttact
     6301 tttttcttct tggctaattc ttggcaggga tctttctgga ggaaaagctg gggccagcca
     6361 gggcaggaga ggtgtgaaat ctgccacgag gggcctgctg tttgccaccc agcccaactt
     6421 cctgttgctg gcccctgccc tctgcccttt tgcctgtcct caggccgctg gaacaaagga
     6481 aggacagctc attcctcatg ggcgatcact ccgcatctat agggtcgagc ctaggggagc
     6541 ttgagggagg gctggggcct ccttgtcctg gatttccagc tctccccatg ccccctccct
     6601 gagcaccacc ggcaccgcct cccaaacagg gctgctggtt tccgcagcca ctgctccacc
     6661 tcccccaaat cgtcatggaa agggtggaga atggagggga accaggcgtc cttggaggca
     6721 gcttgggagg gtgactgtgt agtgtcaccc acaagggagg ctagggcaat ggagcaggcc
     6781 accagcagca gctgtgcagc atggaactca ggccaggctc cgaggctggg ggatctgctt
     6841 ggagttttct gccccccacc ccaaacttct gtcgaggagc aaggcttgcc agcaagtcag
     6901 aaggatttga accgagcagc caatctttcc agccctcccc taccgacctc tgcctggaga
     6961 cgcagcagcc tgtgtcctcc agggcctctg gtttgttgta ttatagtata tttcgctgtg
     7021 gaaaatgtca cgtttagtca ccttggagcc cactcacctg gtcctgttgt tttaccccat
     7081 cccttctctc gcgcgcctat tgatttgttt ctgaggagag tacaccgttc actattgtag
     7141 agtaacccct gtgactcaat attaccatag tgcgatgtcg ttttgtgcta ttttgaacaa
     7201 ttaaaagact ttttttgaaa taa
//
