LOCUS       XM_024446022            1589 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens hepatitis A virus cellular receptor 1
            (HAVCR1), transcript variant X1, mRNA.
ACCESSION   XM_024446022
VERSION     XM_024446022.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000005.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_024446022.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="5"
     gene            1..1589
                     /gene="HAVCR1"
                     /gene_synonym="CD365; HAVCR; HAVCR-1; KIM-1; KIM1; TIM;
                     TIM-1; TIM1; TIMD-1; TIMD1"
                     /note="hepatitis A virus cellular receptor 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 7 ESTs, 15 long SRA reads, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 6 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:26762"
                     /db_xref="HGNC:HGNC:17866"
                     /db_xref="MIM:606518"
     CDS             209..1414
                     /gene="HAVCR1"
                     /gene_synonym="CD365; HAVCR; HAVCR-1; KIM-1; KIM1; TIM;
                     TIM-1; TIM1; TIMD-1; TIMD1"
                     /codon_start=1
                     /product="hepatitis A virus cellular receptor 1 isoform
                     X1"
                     /protein_id="XP_024301790.1"
                     /db_xref="GeneID:26762"
                     /db_xref="HGNC:HGNC:17866"
                     /db_xref="MIM:606518"
                     /translation="MHPQVVILSLILHLADSVAGSVKVGGEAGPSVTLPCHYSGAVTS
                     MCWNRGSCSLFTCQNGIVWTNGTHVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGV
                     YCCRVEHRGWFNDMKITVSLEIVPPKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTT
                     VPTTTVPTTMSIPTTTTVLTTMTVSTTTSVPTTTSIPTTTSVPVTTTVSTFVPPMPLP
                     RQNHEPVATSPSSPQPAETHPTTLQGAIRREPTSSPLYSYTTDGNDTVTESSDGLWNN
                     NQTQLFLEHSLLTANTTKGIYAGVCISVLVLLALLGVIIAKMFHLAAFKLKLCKMQLK
                     RKSKQKTISTLRIVFMPRTKTQWCSLRVYAHECRRLNRHQHIRRLLDPKTIFLFQFHL
                     AFQHVSDTG"
ORIGIN      
        1 gctattactg catatgatgt aggtttagtt ttccaagttc ttccgtggcc ctttttgctt
       61 attatatcaa tccttggtgg gagatagagg aagcattttt agtgctattt tacaactgag
      121 gaaatagagg tttgaagaga actcaggaac tctcagggtt acccagcatt gtgagtgaca
      181 gagcctggat ctgaacgctg atcccataat gcatcctcaa gtggtcatct taagcctcat
      241 cctacatctg gcagattctg tagctggttc tgtaaaggtt ggtggagagg caggtccatc
      301 tgtcacacta ccctgccact acagtggagc tgtcacatcc atgtgctgga atagaggctc
      361 atgttctcta ttcacatgcc aaaatggcat tgtctggacc aatggaaccc acgtcaccta
      421 tcggaaggac acacgctata agctattggg ggacctttca agaagggatg tctctttgac
      481 catagaaaat acagctgtgt ctgacagtgg cgtatattgt tgccgtgttg agcaccgtgg
      541 gtggttcaat gacatgaaaa tcaccgtatc attggagatt gtgccaccca aggtcacgac
      601 tactccaatt gtcacaactg ttccaaccgt cacgactgtt cgaacgagca ccactgttcc
      661 aacgacaacg actgttccaa tgacgactgt tccaacgaca actgttccaa caacaatgag
      721 cattccaacg acaacgactg ttctgacgac aatgactgtt tcaacgacaa cgagcgttcc
      781 aacgacaacg agcattccaa caacaacaag tgttccagtg acaacaactg tctctacctt
      841 tgttcctcca atgcctttgc ccaggcagaa ccatgaacca gtagccactt caccatcttc
      901 acctcagcca gcagaaaccc accctacgac actgcaggga gcaataagga gagaacccac
      961 cagctcacca ttgtactctt acacaacaga tgggaatgac accgtgacag agtcttcaga
     1021 tggcctttgg aataacaatc aaactcaact gttcctagaa catagtctac tgacggccaa
     1081 taccactaaa ggaatctatg ctggagtctg tatttctgtc ttggtgcttc ttgctctttt
     1141 gggtgtcatc attgccaaaa tgtttcattt agcagccttc aaattaaagc tttgcaaaat
     1201 gcagttgaaa aggaagtcca agcagaagac aatatctaca ttgagaatag tctttatgcc
     1261 acggactaag acccagtggt gctctttgag agtttacgcc catgagtgca gaagactgaa
     1321 cagacatcag cacatcagac gtcttttaga ccccaagaca atttttctgt ttcagtttca
     1381 tctggcattc caacatgtca gtgatactgg gtagagtaac tctctcactc caaactgtgt
     1441 atagtcaacc tcatcattaa tgtagtccta attttttatg ctaaaactgg ctcaatcctt
     1501 ctgatcattg cagttttctc tcaaatatga acactttata attgtatgtt ctttttagac
     1561 cccataaatc ctgtatacat caaagagaa
//
