LOCUS       NM_176791                839 bp    mRNA    linear   PRI 01-JUN-2024
DEFINITION  Homo sapiens gametocyte specific factor 1 like (GTSF1L), transcript
            variant 1, mRNA.
ACCESSION   NM_176791 NM_181434
VERSION     NM_176791.4
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 839)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 839)
  AUTHORS   Takemoto,N., Yoshimura,T., Miyazaki,S., Tashiro,F. and Miyazaki,J.
  TITLE     Gtsf1l and Gtsf2 Are Specifically Expressed in Gonocytes and
            Spermatids but Are Not Essential for Spermatogenesis
  JOURNAL   PLoS One 11 (3), e0150390 (2016)
   PUBMED   26930067
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BQ428678.1, BC040049.1 and BX355734.2.
            
            On May 17, 2019 this sequence version replaced NM_176791.3.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC040049.1, SRR5189667.35686.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000373003.2/ ENSP00000362094.1
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-75                BQ428678.1         5-79
            76-836              BC040049.1         1-761
            837-839             BX355734.2         758-760
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="20"
                     /map="20q13.12"
     gene            1..839
                     /gene="GTSF1L"
                     /gene_synonym="C20orf65; dJ1028D15.4; FAM112A"
                     /note="gametocyte specific factor 1 like"
                     /db_xref="GeneID:149699"
                     /db_xref="HGNC:HGNC:16198"
     exon            1..839
                     /gene="GTSF1L"
                     /gene_synonym="C20orf65; dJ1028D15.4; FAM112A"
                     /inference="alignment:Splign:2.1.0"
     CDS             309..755
                     /gene="GTSF1L"
                     /gene_synonym="C20orf65; dJ1028D15.4; FAM112A"
                     /note="isoform 1 is encoded by transcript variant 1;
                     family with sequence similarity 112, member A"
                     /codon_start=1
                     /product="gametocyte-specific factor 1-like isoform 1"
                     /protein_id="NP_789761.1"
                     /db_xref="CCDS:CCDS13323.1"
                     /db_xref="GeneID:149699"
                     /db_xref="HGNC:HGNC:16198"
                     /translation="MEPEAFEICPYDPHHRIPLSRFQYHLASCRRKNPKKAKKMATCK
                     YNACHVVPIKNLEEHEAVCVNRSAVEEEDTENPLKVSPPSSEQNDDTQQVSPCLPSPD
                     IWNVDGANCQHVFVLKTFFPQKVVCENDTKESARETSPQKILRPGQ"
     regulatory      818..823
                     /regulatory_class="polyA_signal_sequence"
                     /gene="GTSF1L"
                     /gene_synonym="C20orf65; dJ1028D15.4; FAM112A"
                     /note="hexamer: AATAAA"
     polyA_site      839
                     /gene="GTSF1L"
                     /gene_synonym="C20orf65; dJ1028D15.4; FAM112A"
                     /note="major polyA site"
ORIGIN      
        1 gacatcatag tatatccgtg agtcaagcgg ctgtgggttt ttggctcttg catctgctat
       61 agttctgtct cgggtgccat ttgctaactc tgttctctgt gtagctgctt ttggcagctc
      121 ctcatctctc ttctaatcca ccactcacag tcctagagaa cagaccacaa gttaagaccg
      181 tcacctacag aatcccaagg gccaaaactg ggcagaggac aactccatcc ttcttacaaa
      241 agggcttctc cacaagaagc atttccgtta gactctagca gtgagatacc ctgcttcaag
      301 aatttctcat ggagccagaa gcctttgaaa tttgccctta tgatcctcac caccgaatcc
      361 cactcagcag attccagtac cacctggcat cgtgcaggag aaagaacccc aagaaagcca
      421 aaaagatggc cacctgcaaa tacaacgcct gccacgtggt ccccatcaaa aatctggagg
      481 aacatgaggc tgtttgtgtc aacaggagcg ctgtggaaga agaggacacc gagaaccctc
      541 tgaaagtcag tcctcctagt tcagagcaga acgatgacac ccagcaggtc tcaccctgcc
      601 ttcccagccc cgatatctgg aatgtcgatg gcgctaattg ccagcatgtg tttgtcctta
      661 agactttttt tcctcaaaag gttgtttgtg aaaatgacac gaaagagtca gcaagagaga
      721 ccagtcccca gaagatcctc agaccaggac agtaaactgc cagctgagga aggagcacac
      781 gcctcatcaa tgcatggaag aacgtgcaat gcatcagaat aaaagacatg caaagtaaa
//
