LOCUS       XM_047421066            3963 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens GTF2I repeat domain containing 1
            (GTF2IRD1), transcript variant X15, mRNA.
ACCESSION   XM_047421066
VERSION     XM_047421066.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000007.14) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3963
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
     gene            1..3963
                     /gene="GTF2IRD1"
                     /gene_synonym="BEN; CREAM1; GTF3; hMusTRD1alpha1; MUSTRD1;
                     RBAP2; WBS; WBSCR11; WBSCR12"
                     /note="GTF2I repeat domain containing 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 ESTs, 29 long SRA reads, and 83% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     7 samples with support for all annotated introns"
                     /db_xref="GeneID:9569"
                     /db_xref="HGNC:HGNC:4661"
                     /db_xref="MIM:604318"
     CDS             141..2966
                     /gene="GTF2IRD1"
                     /gene_synonym="BEN; CREAM1; GTF3; hMusTRD1alpha1; MUSTRD1;
                     RBAP2; WBS; WBSCR11; WBSCR12"
                     /codon_start=1
                     /product="general transcription factor II-I repeat
                     domain-containing protein 1 isoform X10"
                     /protein_id="XP_047277022.1"
                     /db_xref="GeneID:9569"
                     /db_xref="HGNC:HGNC:4661"
                     /db_xref="MIM:604318"
                     /translation="MALLGKRCDVPTNGCGPDRWNSAFTRKDEIITSLVSALDSMCSA
                     LSKLNAEVACVAVHDESAFVVGTEKGRMFLNARKELQSDFLRFCRGPPWKDPEAEHPK
                     KVQRGEGGGRSLPRSSLEHGSDVYLLRKMVEEVFDVLYSEALGRASVVPLPYERLLRE
                     PGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRPLEDGGRDSKALVELN
                     GVSLIPKGSRDCGLHGQAPKVPPQDLPPTATSSSMASFLYSTALPNHAIRELKQEAPS
                     CPLAPSDLGLSRPMPEPKATGAQDFSDCCGQKPTGPGGPLIQNVHASKRILFSIVHDK
                     SEKWDAFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGI
                     PDKIPFKRPCTYGVPKLKRILEERHSIHFIIKRMFDERIFTGNKFTKDTTKLEPASPP
                     EDTSAEVSRATVLDLAGNARSDKGSMSEDCGPGTSGELGGLRPIKIEPEDLDIIQVTV
                     PDPSPTSEEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDARPEERPVEDSHGDVIRPLR
                     KQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLR
                     KILEASNSIQFVIKRPELLTEGVKEPIMDSQENYDARLSRIDIANTLREQVQDLFNKK
                     YGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIK
                     FTVTRPFQGLIPKPDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPVLVPYKLIR
                     DSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVIINQLQPFAEICNDAKV
                     PAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSSSNPDSVASANQISLVVKLHRFGLRHS
                     SLWPSPLCLAGPSTLGCGPRGRGGTGL"
     polyA_site      3963
                     /gene="GTF2IRD1"
                     /gene_synonym="BEN; CREAM1; GTF3; hMusTRD1alpha1; MUSTRD1;
                     RBAP2; WBS; WBSCR11; WBSCR12"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acggccgccc cccacctgcc cgggaggggc cgggagctgg gagctgtcac cccctccctc
       61 cttgccaccg gctcttctgg aggtgggggg cgtcccgggc cggcgcccgc aggctgctgc
      121 agttggcgaa tgaggcgacc atggccttgc tgggtaagcg ctgtgacgtc cccaccaacg
      181 gctgcggacc cgaccgctgg aactccgcgt tcacccgcaa agacgagatc atcaccagcc
      241 tcgtgtctgc cttagactcc atgtgctcag cgctgtccaa actgaacgcc gaggtggcct
      301 gtgtcgccgt gcacgatgag agcgcctttg tggtgggcac agagaagggg agaatgttcc
      361 tgaatgcccg gaaggagcta cagtcagact tcctcaggtt ctgccgaggg cccccgtgga
      421 aggatccgga ggcagagcac cccaagaagg tgcagcgggg cgagggtgga ggccgtagcc
      481 tccctcggtc ctccctggaa catggctcag atgtgtacct tctgcggaag atggtagagg
      541 aggtgtttga tgttctttat agcgaggccc tgggaagggc cagtgtggtg ccactgccct
      601 atgagaggct gctcagggag ccagggctgc tggccgtgca ggggctgccc gaaggcctgg
      661 ccttccgaag gccagccgag tatgacccca aggccctcat ggccatcctg gaacacagcc
      721 accgcatccg cttcaagctc aagaggccac ttgaggatgg cgggcgggac tcgaaggccc
      781 tggtggagct gaacggtgtc tccctgattc ccaaggggtc acgggactgt ggcctgcatg
      841 gccaggcccc caaggtgcca ccccaggacc tgcccccaac cgccacctcc tcctccatgg
      901 ccagcttcct gtacagcacg gcgctcccca accacgccat ccgagagctc aagcaggaag
      961 caccttcctg cccccttgcc cccagcgacc tgggcctgag tcggcccatg ccagagccca
     1021 aggccaccgg tgcccaagac ttctccgact gttgtggaca gaagcccact gggcctggtg
     1081 ggcctctcat ccagaacgtc catgcctcca agcgcattct cttctccatc gtccatgaca
     1141 agtcagagaa gtgggacgcc ttcataaagg aaaccgagga catcaacacg ctccgggagt
     1201 gtgtgcagat cctgtttaac agcagatatg cggaagccct gggcctggac cacatggtcc
     1261 ccgtgcccta ccggaagatt gcctgtgacc cggaggctgt ggagatcgtg ggcatcccgg
     1321 acaagatccc cttcaagcgc ccctgcactt atggagtccc caagctgaag cggatcctgg
     1381 aggagcgcca tagtatccac ttcatcatta agaggatgtt tgatgagcga attttcacag
     1441 ggaacaagtt taccaaagac accacgaagc tggagccagc cagcccgcca gaggacacct
     1501 ctgcagaggt ctctagggcc accgtccttg accttgctgg gaatgctcgg tcagacaagg
     1561 gcagcatgtc tgaagactgt gggccaggaa cctccgggga gctgggcggg ctgaggccga
     1621 tcaaaattga gccagaggat ctggacatca ttcaggtcac cgtcccagac ccctcgccaa
     1681 cctctgagga aatgacagac tcgatgcctg ggcacctgcc atcggaggat tctggttatg
     1741 ggatggagat gctgacagac aaaggtctga gtgaggacgc gcggcccgag gagaggcccg
     1801 tggaggacag ccacggtgac gtgatccggc ccctgcggaa gcaggtggag ctgctcttca
     1861 acacacgata cgccaaggcc attggcatct cggagcccgt caaggtgccg tactccaagt
     1921 ttctgatgca cccggaggag ctgtttgtgg tgggactgcc tgaaggcatc tccctccgca
     1981 ggcccaactg cttcgggatc gccaagctcc ggaagattct ggaggccagc aacagcatcc
     2041 agtttgtcat caagaggccc gagctgctca ctgagggagt caaagagccc atcatggata
     2101 gtcaagaaaa ttatgacgcg aggctctcac ggatcgacat cgccaacaca ctaagggagc
     2161 aggtccagga ccttttcaat aagaaatacg gggaagcctt gggcatcaag tacccggtcc
     2221 aggtccccta caagcggatc aagagtaacc ccggctccgt gatcatcgag gggctgcccc
     2281 caggaatccc gttccgaaag ccctgtacct tcggctccca gaacctggag aggattcttg
     2341 ctgtggctga caagatcaag ttcacagtca ccaggccttt ccaaggactc atcccaaagc
     2401 ctgatgaaga tgacgccaac agactcgggg agaaggtgat cctgcgggag caggtgaagg
     2461 aactcttcaa cgagaaatac ggtgaggccc tgggcctgaa ccggccggtg ctggtccctt
     2521 ataaactaat ccgggacagc ccagacgccg tggaggtcac gggtctgcct gatgacatcc
     2581 ccttccggaa ccccaacacg tacgacatcc accggctgga gaagatcctg aaggcccgag
     2641 agcatgtccg catggtcatc attaaccagc tccaaccctt tgcagaaatc tgcaatgatg
     2701 ccaaggtgcc agccaaagac agcagcattc ccaagcgcaa gagaaagcgg gtctcggaag
     2761 gaaattccgt ctcctcttcc tcctcgtctt cctcttcctc gtcctctaac ccggattcag
     2821 tggcatcggc caaccagatc tcactcgtgg taaagttgca ccgatttgga ctccggcact
     2881 catctctgtg gccctcaccc ctctgtctgg cagggccgtc tactctggga tgtgggccca
     2941 ggggacgggg aggcactggg ctttgagtgg ggaccttccg gcctcggggg ttatagatgc
     3001 atccacctgt ctcacccaag aggtagccca tccttctcgt ggggtactca caggcactca
     3061 ggcaggaatt cacatcctcg ctgggcagat gggccggctg aggtccacct gcccacaccc
     3121 ttcagccgca ccagagctgg agacatgaaa agacatggct ggcgggtgca gtggctcacg
     3181 cctgtaatcc cagcactttg gcaggtcaag tcgggtggat cacctgaggt caggagtttg
     3241 agaccaggct gaccaacacg gggaaacccc atctctacta aaaatacaaa attagccggg
     3301 caaagtgggg catagtggct catgcctgta atcccagcta cttggaaggc tgagatagga
     3361 gaatcgcttg aacctgggag gcagaggttg caatgagccg aggtcgcgcc attgcactgc
     3421 agcctgggca acaagagtga aacactgtct cagaaaaaaa aattagccag gcatggtggc
     3481 acgtgcctgt ggtcgcagct acttgggagg ctggggcagg aggatcattt gagcccaagg
     3541 ggattgaggc tgcagtgagc caagatcgtc ccattgcact ccagcctggg caagagaacg
     3601 agactccatc tcaaaaataa ataaataggc tgggtgtggt ggctcacgcc tgtaatccta
     3661 gcactttggg aggccgaggc aggcggatca cttgaggctc aggagttcaa gaccagcctg
     3721 gccaacatgg caaaaccccg tctctactaa aaatagaaaa attagccggg catggtggcg
     3781 ggcgcctata atcccagcta ctcgggaggc tgaggcagga gactcgcttg aacccgcggg
     3841 gccaaggttg cagtgagccg agattgcatc actgcactcc agcctgggca gaagagtgaa
     3901 actccatctc aaaaaaataa aaaatataaa taaatagcct ctgagaaagc tcttccaaaa
     3961 gca
//
