LOCUS       NM_001310219            2668 bp    mRNA    linear   PRI 17-APR-2022
DEFINITION  Homo sapiens GSG1 like 2 (GSG1L2), mRNA.
ACCESSION   NM_001310219
VERSION     NM_001310219.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2668)
  AUTHORS   Greliche N, Germain M, Lambert JC, Cohen W, Bertrand M, Dupuis AM,
            Letenneur L, Lathrop M, Amouyel P, Morange PE and Tregouet DA.
  TITLE     A genome-wide search for common SNP x SNP interactions on the risk
            of venous thrombosis
  JOURNAL   BMC Med Genet 14, 36 (2013)
   PUBMED   23509962
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2668)
  AUTHORS   Zody MC, Garber M, Adams DJ, Sharpe T, Harrow J, Lupski JR,
            Nicholson C, Searle SM, Wilming L, Young SK, Abouelleil A, Allen
            NR, Bi W, Bloom T, Borowsky ML, Bugalter BE, Butler J, Chang JL,
            Chen CK, Cook A, Corum B, Cuomo CA, de Jong PJ, DeCaprio D, Dewar
            K, FitzGerald M, Gilbert J, Gibson R, Gnerre S, Goldstein S,
            Grafham DV, Grocock R, Hafez N, Hagopian DS, Hart E, Norman CH,
            Humphray S, Jaffe DB, Jones M, Kamal M, Khodiyar VK, LaButti K,
            Laird G, Lehoczky J, Liu X, Lokyitsang T, Loveland J, Lui A,
            Macdonald P, Major JE, Matthews L, Mauceli E, McCarroll SA, Mihalev
            AH, Mudge J, Nguyen C, Nicol R, O'Leary SB, Osoegawa K, Schwartz
            DC, Shaw-Smith C, Stankiewicz P, Steward C, Swarbreck D,
            Venkataraman V, Whittaker CA, Yang X, Zimmer AR, Bradley A, Hubbard
            T, Birren BW, Rogers J, Lander ES and Nusbaum C.
  TITLE     DNA sequence of human chromosome 17 and analysis of rearrangement
            in the human lineage
  JOURNAL   Nature 440 (7087), 1045-1049 (2006)
   PUBMED   16625196
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC026591.15 and AC027045.21.
            
            On Feb 10, 2021 this sequence version replaced NM_001310219.1.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA1968968, SAMEA2145743
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            MANE Ensembl match        :: ENST00000399363.5/ ENSP00000465978.1
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-318               AC026591.15        147901-148218
            319-366             AC027045.21        8387-8434
            367-519             AC027045.21        10023-10175
            520-631             AC027045.21        11404-11515
            632-2668            AC027045.21        16361-18397
FEATURES             Location/Qualifiers
     source          1..2668
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
                     /map="17p13.1"
     gene            1..2668
                     /gene="GSG1L2"
                     /note="GSG1 like 2"
                     /db_xref="GeneID:644070"
                     /db_xref="HGNC:HGNC:51826"
     exon            1..318
                     /gene="GSG1L2"
                     /inference="alignment:Splign:2.1.0"
     CDS             9..890
                     /gene="GSG1L2"
                     /note="GSG1-like protein 2; germ cell-specific gene 1-like
                     protein 2-like; putative germ cell-specific gene 1-like
                     protein 2"
                     /codon_start=1
                     /product="germ cell-specific gene 1-like protein 2
                     precursor"
                     /protein_id="NP_001297148.1"
                     /db_xref="CCDS:CCDS82072.1"
                     /db_xref="GeneID:644070"
                     /db_xref="HGNC:HGNC:51826"
                     /translation="MDRAKQQQALLLLPVCLALTFSLTAVVSSHWCEGTRRVVKPLCQ
                     DQPGGQHCIHFKRDNSSNGRMDNNSQAVLYIWELGDDKFIQRGFHVGLWQSCEESLNG
                     EDEKCRSFRSVVPAEEQGVLWLSIGGEVLDIVLILTSAILLGSRVSCRSPGFHWLRVD
                     ALVAIFMVLAGLLGMVAHMMYTTIFQITVNLGPEDWKPQTWDYGWSYCLAWGSFALCL
                     AVSVSAMSRFTAARLEFTEKQQAQNGSRHSQHSFLEPEASESIWKTGAAPCPAEQAFR
                     NVSGHLPPGAPGKVSIC"
     exon            319..366
                     /gene="GSG1L2"
                     /inference="alignment:Splign:2.1.0"
     exon            367..519
                     /gene="GSG1L2"
                     /inference="alignment:Splign:2.1.0"
     exon            520..631
                     /gene="GSG1L2"
                     /inference="alignment:Splign:2.1.0"
     exon            632..2668
                     /gene="GSG1L2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2650..2655
                     /regulatory_class="polyA_signal_sequence"
                     /gene="GSG1L2"
                     /note="hexamer: AATAAA"
     polyA_site      2668
                     /gene="GSG1L2"
                     /note="major polyA site"
ORIGIN      
        1 actcagccat ggacagggcc aagcagcagc aggcgctgct cctcctccct gtctgcctcg
       61 ccctcacctt ctccctcacc gccgtggtca gcagccactg gtgtgagggg acccgacggg
      121 tggtgaagcc actgtgccag gaccagccgg gagggcagca ctgcattcac ttcaaacggg
      181 acaacagcag caatggcagg atggacaaca atagccaggc tgtcctgtac atttgggagc
      241 tgggtgatga caagttcatt cagcgggggt tccatgtggg gctctggcag tcctgcgagg
      301 agagcctcaa cggtgaagat gaaaagtgta ggagtttccg gagtgtagtg ccagctgaag
      361 aacaaggtgt tttgtggctg tccatcgggg gcgaggtcct ggatatcgtt ctgatactga
      421 caagcgccat cctcctgggc tccagagtga gttgtcgcag ccctgggttc cactggctca
      481 gggtggatgc cttggtagcc atcttcatgg tgctggcagg gcttctaggc atggtggccc
      541 acatgatgta cacaaccatt tttcaaatca ctgtgaacct tggaccagaa gattggaagc
      601 ctcagacctg ggactatggc tggtcatatt gccttgcctg gggttctttc gccctctgcc
      661 tggctgtgtc ggtctcggcc atgagcaggt tcacggcagc ccgcctggaa ttcaccgaga
      721 agcagcaggc acagaacggc agtcggcact ctcaacacag cttcctggaa cccgaggctt
      781 cggagagcat ttggaaaaca ggagctgctc cttgccctgc tgaacaagcc ttcaggaatg
      841 tttctggaca cctcccacca ggcgccccag gcaaggtgtc catatgctag ccagtgtcca
      901 tggctgccac atccgcacag gcaaacaagc caggcactga cactcacaat gtacaccctg
      961 cctctgggtt ggacttcagg agattgttgt ccagggaaag cttccatccc cacccctcca
     1021 catctcacct tttactaaac acctttggct ttagcctttg attcctgtta aaatgccagt
     1081 accttgaagt gagataatgc ttactgaaga tatcaaccat tgacactcta gtataaaaga
     1141 gagcttctta atgacagtga atttgataag gataccaaag aaacagggag gatgccagta
     1201 ctaagggaag agaagttgaa gaaagaggaa agcaagtctt tttaactaca agggaggcaa
     1261 aatgtgttgt ccgcataggt ttgttgacag aaaaatccag aaaatgtttt ctcctaattg
     1321 acacacacaa taaagtatgt gtggctatgt catactttct ttttcatttg aatcaagaag
     1381 acagaaattt caaaatatgt ttcctgttat tttttaaaat attttttctt ggaaattttg
     1441 tgtttctact catagtaaaa tcagtttgga aggacagtcg aatgatagaa atgaaaacac
     1501 agtcaaatgg aatgacatct tatcttagtt taagtggaac acatgtttga gttgttctgc
     1561 ttaaattaaa tcgccagcca cttttgcttc taaaaataaa cattaccaaa catgcaggtc
     1621 ttgttggagg cagtggtggg ctgcaggatt cctaatacag tcatctgcaa tattgtatca
     1681 attcatccca tgtccagcta ccatgttatt caggccacag gttgttccac acataatttg
     1741 attttttgaa aaaagaaagg gggtgggtgt agtggctcac gcctgtaatc ccagcacttt
     1801 gtgaggccga ggtagacaga tcacttgagg tcaggagttc gagaccagcc tggccaacat
     1861 ggtgaaaccc tgtctctact aaaaaaaaaa aaacatcaaa aatagccaag catggtggca
     1921 catgtctgta atcccagcta ctcaggaggc tgaggcaggg aaatcgcttg aacctgggag
     1981 gtggaggttg cagtgagcag agatcgcgcc attgcactcc agcctgggca atagagtgag
     2041 accctgtctc aaaaaaaaga aaaagaaaaa gaaaagaaag ggactgcaaa ctctaacaac
     2101 cttcaatatg tccttgctca gatccatttt aaaaattata ttcacgtgtt ttgtaaacat
     2161 atcatttctg ggaaaaaaat ccaataaaaa tctgtttatg ctgaactgta acacttatac
     2221 tgtcataaaa aaaatgaaaa aaaaaatcca gctaccttcg tgtttgtggc tcaaggtgag
     2281 cacctgcctg acaaatgctg cttctgtgga attttgtgtt tcattgcgct aagcatatat
     2341 gagagataga caatggattc ttgctggaat aagcccaacc cagagaatgt ctgctggggt
     2401 tccctgggcc atgtgctcac ctagagcagg agagtttgta cccacaagcc tctgcccttt
     2461 gcagtgtgca ggttctttca tatggttttt catccctatg tattcatgta ggcaggtcct
     2521 gtgtgactgt cacgatatca ggtcaaagtc tcatcttaca gggaatgaaa tacactggag
     2581 agagacttcg ctgaattcgc tgttgtgaaa aacacctgtg aacactgtgg ctgaggatgc
     2641 caaagaagaa ataaactttt aaaaacta
//
