LOCUS       XM_011526862            4497 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens glutamate ionotropic receptor kainate type
            subunit 5 (GRIK5), transcript variant X2, mRNA.
ACCESSION   XM_011526862
VERSION     XM_011526862.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000019.10) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011526862.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4497
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
     gene            1..4497
                     /gene="GRIK5"
                     /gene_synonym="EAA2; GluK5; GRIK2; KA2"
                     /note="glutamate ionotropic receptor kainate type subunit
                     5; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 23 ESTs, 20 long SRA reads, 1 Protein, and
                     98% coverage of the annotated genomic feature by RNAseq
                     alignments, including 36 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:2901"
                     /db_xref="HGNC:HGNC:4583"
                     /db_xref="MIM:600283"
     CDS             1005..3950
                     /gene="GRIK5"
                     /gene_synonym="EAA2; GluK5; GRIK2; KA2"
                     /codon_start=1
                     /product="glutamate receptor ionotropic, kainate 5 isoform
                     X2"
                     /protein_id="XP_011525164.1"
                     /db_xref="GeneID:2901"
                     /db_xref="HGNC:HGNC:4583"
                     /db_xref="MIM:600283"
                     /translation="MPAELLLLLIVAFASPSCQVLSSLRMAAILDDQTVCGRGERLAL
                     ALAREQINGIIEVPAKARVEVDIFELQRDSQYETTDTMCQILPKGVVSVLGPSSSPAS
                     ASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSLAVSRILKSFNYPS
                     ASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPTPLLKEIRDDKVSTIIIDA
                     NASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGIVEDSSNILGFSMFNTSHPF
                     YPEFVRSLNMSWRENCEASTYLGPALSAALMFDAVHVVVSAVRELNRSQEIGVKPLAC
                     TSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVWY
                     SNRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMRRPNFQALSGNERFEGFCVDM
                     LRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQKADLAVAAFTITAERE
                     KVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAA
                     RLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGV
                     WWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNS
                     RYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQI
                     GGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRAK
                     GLGMENIGGIFIVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQELRHAVSC
                     RKTSRSRRRRRPGGPSRALLSLRAVREMRLSNGKLYSAGAGGDAGSAHGGPQRLLDDP
                     GPPSGARPAAPTPCTHVRVCQECRRIQALRASGAGAPPRGLGVPAEATSPPRPRPGPA
                     GPRELAEHE"
ORIGIN      
        1 gacccagcgc aggcggcagg cgggcaggca ggcggcggcc tcggagggga gactgagcgg
       61 tggcggcagc cagcggcagg gaggcaggcc cagccgggga ctggagccgg ggactggagc
      121 cggctcctca caggggacca ggagtgtgtc gccaggccct cccactgagg cccagcaccg
      181 ggagcccctg ggacacccca ccctcctccg cctttctctt ccacctgctc ctctccatcc
      241 tcctctccct cctccctatc tctccacctc atttgccccc ttcttggcct ctccgggtct
      301 cccagctctc catcctcccc agctctccac tcccgggctc tccccgcccc cagcatgctt
      361 ttcccgtggg ggctgagggc ttgaggactc cgggcccttg cctcaaccag ggcagggccc
      421 aggctccagg ggggaggggg aaagggggcg gccccctccc ccagcaggcc ctcccctccc
      481 ccacttctcc tgatggccgg cttccttttc tccacccagt cctcgccccc tgtggccccc
      541 ccaggccggc ccggctaggg gagggggcgg gggccctttc ctgggccagc ttccccctcc
      601 cccggctttg cctgtgcccc ccccttccgt tttcaccttc ctctcctcct ttcctccctc
      661 cttcccctcc atttgctcct tccccctctc ctctctcccc ttctctcctc cattttctcc
      721 tttccccttc ctcccctccc cggcccgccc tctcctcttc cacctgtcct tcctccctgc
      781 tcctgtggag ccaccgtttt ggattagttg ggagccacca ccggcggcgg gggagggggc
      841 cctgtggact gccctctccc cccgcccagc cccaccacca cccagcgcca gagcacctcc
      901 cgctgtcggt cttcgggcct cgagggagcc cagccctccg tcccaccagg atccgtggcg
      961 agtgggggcc gcggcagctg cgtccccatg aggaggggag gaagatgccg gctgagctgc
     1021 tgctgctgct gattgttgcc ttcgccagcc ccagctgcca ggtgctctca tcactgcgca
     1081 tggctgcaat cctggatgat cagacagtgt gtggccgcgg tgagcgtctg gccttggcct
     1141 tggcccggga gcagatcaac gggatcatcg aggtcccagc caaggcccga gtggaagtag
     1201 acatctttga gctgcagcgg gacagccagt acgagaccac ggacaccatg tgtcagatct
     1261 tacccaaagg ggttgtgtct gtccttgggc cctcctctag cccagcatct gcctccaccg
     1321 tgagccatat ctgtggagag aaggagatcc cccacatcaa ggtgggtccc gaggagacac
     1381 cccgccttca gtaccttcgc ttcgcgtctg tcagcctgta ccccagtaac gaggacgtca
     1441 gcttggcggt ctcccgaatc ctcaagtcct tcaactaccc ctcggccagc ctcatctgcg
     1501 ccaaggctga gtgcctgctg cgattggagg aactggtgcg tggcttcctc atctccaagg
     1561 agacgctgtc agtgaggatg ttggacgaca gccgggaccc cacaccactg ctcaaggaga
     1621 tccgtgatga caaggtgtcc accatcatca tcgacgccaa cgcctccatc tcccacctca
     1681 tcctccgtaa ggcctcggaa ctgggaatga cctcagcgtt ttacaagtac atcctcacca
     1741 ccatggactt ccccatcctg catctggacg gtattgtgga ggactcctcc aacatcctgg
     1801 gcttctccat gttcaacacg tcccacccct tctaccctga gtttgtccgc agcctcaaca
     1861 tgtcctggag ggagaactgt gaagccagca cctacctggg ccctgcgctg tcagccgccc
     1921 tgatgtttga cgccgtgcac gtggtggtga gcgctgtccg agagctgaac cgcagccagg
     1981 agatcggtgt gaagcctctg gcctgtacat cggccaacat ttggccccac gggaccagcc
     2041 tcatgaacta cctgcgcatg gtagagtatg atgggctgac cgggcgggtc gagttcaaca
     2101 gcaaagggca gagaaccaac tacaccctgc gcatcctaga aaagtcccgg cagggccacc
     2161 gtgagattgg ggtgtggtac tctaaccgca ccctggccat gaatgccacc accctggaca
     2221 tcaacctgtc gcagacactg gccaacaaga ccctggtggt cacaaccatc ctggagaacc
     2281 catacgtcat gcgccggccc aacttccagg ccctgtcggg gaacgaacgc ttcgagggct
     2341 tctgcgtgga catgctgcgg gagctggccg agctgctgcg cttccgctac cgcctgcggt
     2401 tggtggagga tgggctgtac ggggcgcccg agcccaacgg ctcctggacg ggcatggttg
     2461 gcgagctcat caaccggcag aaggcagacc tggctgtggc cgccttcacc atcacagctg
     2521 agcgggagaa ggtcatcgac ttttccaagc cctttatgac cctggggatc agcatcctct
     2581 accgagtgca catgggccgc aagcctggct acttctcctt cctggacccc ttctcccctg
     2641 ctgtgtggct cttcatgctt cttgcctacc tggctgtcag ctgcgtcctg tttctggctg
     2701 ccaggctgag cccctatgag tggtataacc cacacccatg cctgcgggca cgcccccaca
     2761 tcctggagaa ccagtacacg ctgggcaaca gcctgtggtt tcccgtgggg ggcttcatgc
     2821 agcagggctc ggagatcatg ccccgggcgc tgtccacgcg ctgtgtcagc ggagtctggt
     2881 gggccttcac cttgatcatc atctcctcct acacggccaa cctggccgcc ttcctcaccg
     2941 tgcagcgcat ggaggtgcct gtggagtcgg ccgatgacct ggcagatcag accaacatcg
     3001 agtatggcac catccacgcc ggctccacca tgaccttctt ccagaattca cggtaccaaa
     3061 cgtaccagcg catgtggaac tacatgcagt cgaagcagcc cagcgtgttc gtcaagagca
     3121 cagaagaggg cattgcccgc gtcctcaact cccgctacgc cttcctgctc gagtccacca
     3181 tgaacgaata ccaccggcgc ctcaactgca acctcaccca gatcggggga ctcctcgaca
     3241 ccaagggcta cggcattggc atgccgctgg gctccccgtt ccgggatgag atcacactgg
     3301 ccatcctgca gcttcaggag aacaaccggc tggagatcct gaagcgcaag tggtgggagg
     3361 ggggccggtg ccccaaggag gaggaccatc gagctaaagg tttgggcatg gagaacattg
     3421 gtggcatttt tatcgtgctc atctgtggcc tcatcattgc tgtcttcgtg gcggtcatgg
     3481 aattcatatg gtccacacgg aggtcagctg agtccgagga ggtgtcggtg tgccaggaga
     3541 tgctgcagga gctgcgccac gccgtttctt gccgcaagac gtcgcgttcc cgccggcgcc
     3601 gacgcccggg cggcccgagc cgggccctgc tgtcactgcg cgcggtccgc gagatgcgcc
     3661 tcagcaacgg caagctctac tcggccggcg cgggcgggga tgcgggcagc gcgcacgggg
     3721 gcccgcagcg cctcctggac gacccggggc cccccagcgg agcccgaccc gccgccccca
     3781 ccccctgcac ccacgtgcgc gtctgccagg agtgccggcg catccaggcg ctgcgggcct
     3841 cgggggccgg cgcgcctccg cgtggcctgg gcgtccccgc cgaagccacc agcccgcccc
     3901 ggccgcggcc tggccccgcc ggcccccggg agctggcgga gcacgagtga ccacgggcgg
     3961 ggctgtgcgg gcgcccggac tgaccgaagg gacggggccc gccccaggcc ccagcagtct
     4021 ccgctcccgc agcgggcgcg ggacaggact tgtgcgccgg cgccccggac gccgcgattt
     4081 tgcctttggt tccccgcgaa gtccgaggcc tggctctgga gcccgcctgc gccccccagt
     4141 ggactcgcga gagggtgccg cgggcgagaa gggcgcagga accgaggact ccaggggctg
     4201 gggacttcgg gggcggctct gggaagcgga aagcagtcag cggagaggac cccattctgg
     4261 gactgctcag gctccccaag acttgacgca gccccccacg cttctggagg tggggagggc
     4321 ctctggacag atgggtgtcc cctggtgccc ctccactctt ctcttcctct cttttttggg
     4381 gggagaaacc tcggaatttc tatgagacct cccccaggga gggggtcagt tgggccccca
     4441 tccctcccct tgccacatcg cagcccctgt tggaataaaa aaaagaacaa aacccca
//
