LOCUS       XM_011521054            2192 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens glypican 5 (GPC5), transcript variant X2,
            mRNA.
ACCESSION   XM_011521054
VERSION     XM_011521054.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000013.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011521054.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="13"
     gene            1..2192
                     /gene="GPC5"
                     /note="glypican 5; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 7 ESTs, 10 long
                     SRA reads, and 97% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:2262"
                     /db_xref="HGNC:HGNC:4453"
                     /db_xref="MIM:602446"
     CDS             427..1869
                     /gene="GPC5"
                     /codon_start=1
                     /product="glypican-5 isoform X2"
                     /protein_id="XP_011519356.1"
                     /db_xref="GeneID:2262"
                     /db_xref="HGNC:HGNC:4453"
                     /db_xref="MIM:602446"
                     /translation="MDAQTWPVGFRCLLLLALVGSARSEGVQTCEEVRKLFQWRLLGA
                     VRGLPDSPRAGPDLQVCISKKPTCCTRKMEERYQIAARQDMQQFLQTSSSTLKFLISR
                     NAAAFQETLETLIKQAENYTSILFCSTYRNMALEAAASVQEFFTDVGLYLFGADVNPE
                     EFVNRFFDSLFPLVYNHLINPGVTDSSLEYSECIRMARRDVSPFGNIPQRVMGQMGRS
                     LLPSRTFLQALNLGIEVINTTDYLHFSKECSRALLKMQYCPHCQGLALTKPCMGYCLN
                     VMRGCLAHMAELNPHWHAYIRSLEELSDAMHGTYDIGHVLLNFHLLVNDAVLQAHLNG
                     QKLLEQVNRICGRPVRTPTQSPRCSFDQSKEKHGMKTTTRNSEETLANRRKEFINSLR
                     LYRSFYGGLADQLCANELAAADGLPCWNGEDIVKSYTQRVVGNGIKAQSGNPEVKVKG
                     IDPVINQIIDKLKHVVQETNWKLFGMNHLI"
     polyA_site      2192
                     /gene="GPC5"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcccaggtt agctgctgcg agccgagccg ggcggcggag gcggcggcgg cggcggcagt
       61 ggcggcagtg gcggcagtgg cggcagcggc agcagttgca gcagtggtgg ccagagcgga
      121 tgcttgcggg ctccctgcgg ctccactagt tttcttcgcc ccgcccagcc gcccactctt
      181 ctcggctagg gaagaagacc agagggtgct cagctggaaa actctggtgt ctcagcttag
      241 ggcctcctcc gggaagagct aactgctccc aggtgaagcc ggtgcccgcg ggcggtccgt
      301 acaccccgca gccggctcgc accgctcgag agcctcggcc gctgtgtctt ccacgtctgc
      361 agctcagcca gggcgcgcag ggcgagtggg gtccactggc gggtaaaggg gaccaggacg
      421 gcgaggatgg acgcacagac ctggcccgtg ggctttcgct gcctcctcct tctggccctg
      481 gttgggtccg cccgcagcga gggcgtgcag acctgcgaag aagttcggaa acttttccag
      541 tggcggctgc tgggagctgt cagggggctg ccggattcgc cgcgggcagg acctgatctt
      601 caggtttgca tatccaaaaa gcctacatgt tgcaccagga agatggagga gagatatcag
      661 attgcggctc gccaggatat gcagcagttt cttcaaacgt ccagctctac attaaagttt
      721 ctaatatctc gaaatgcggc tgcttttcaa gaaacccttg aaactctcat caaacaagca
      781 gaaaattaca ccagtatact tttttgcagt acctacagga acatggcctt ggaggctgct
      841 gcttcggttc aggagttctt cactgatgtg gggctgtatt tatttggtgc ggatgttaat
      901 cctgaagaat ttgtaaacag attttttgac agtctttttc ctctggtcta caaccacctc
      961 attaaccctg gtgtgactga cagttccctg gaatactcag aatgcatccg gatggctcgc
     1021 cgggatgtga gtccatttgg taatattccc caaagagtaa tgggacagat ggggaggtcc
     1081 ctgctgccca gccgcacttt tctgcaggca ctcaatctgg gcattgaagt catcaacacc
     1141 acagactatc tgcacttctc caaagagtgc agcagagccc tcctgaagat gcaatactgc
     1201 ccgcactgcc aaggcctggc gctcactaag ccttgtatgg gatactgcct caatgtcatg
     1261 cgaggctgcc tggcgcacat ggcggagctt aatccacact ggcatgcata tatccggtcg
     1321 ttggaagaac tctcggatgc aatgcatgga acatacgaca ttggacacgt gctgctgaac
     1381 tttcacttgc ttgttaatga tgctgtgtta caggctcacc tcaatggaca aaaattattg
     1441 gaacaggtaa ataggatttg tggccgccct gtaagaacac ccacacaaag cccccgttgt
     1501 tcttttgatc agagcaaaga gaagcatgga atgaagacca ccacaaggaa cagtgaagag
     1561 acgcttgcca acagaagaaa agaatttatc aacagccttc gactgtacag gtcattctat
     1621 ggaggtctag ctgatcagct ttgtgctaat gaattagctg ctgcagatgg acttccctgc
     1681 tggaatggag aagatatagt aaaaagttat actcagcgtg tggttggaaa tggaatcaaa
     1741 gcccagtctg gaaatcctga agtcaaagtc aaaggaattg atcctgtgat aaatcagatt
     1801 attgataaac tgaagcatgt tgttcaggaa acaaattgga agcttttcgg aatgaatcat
     1861 cttatctaaa ggctcacagc tacgtgacag taatgttgag atttgccatg ttctagtgac
     1921 cctgtaattg ttataagcaa gaatttaggg tggatgacct ataattcaac ttctgattct
     1981 aaattttatt ttctttcttg tttttgattt catatgcttg attctacaca tatttatgca
     2041 cctttctgtg cttaatgtat tactgccaat acacgcctaa gcttttaaat ggtgtgaatc
     2101 aatataggct ctttgaatgt ggtttcatat ttgagtgtta ttttgacagc cattttaact
     2161 aaaatcctgt aaaataaaaa tgttttctct ta
//
