LOCUS       NM_001282472            5188 bp    mRNA    linear   PRI 16-FEB-2024
DEFINITION  Homo sapiens golgin A8 family member J (GOLGA8J), mRNA.
ACCESSION   NM_001282472 XM_003959937 XM_003960567
VERSION     NM_001282472.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 5188)
  AUTHORS   Zody,M.C., Garber,M., Sharpe,T., Young,S.K., Rowen,L., O'Neill,K.,
            Whittaker,C.A., Kamal,M., Chang,J.L., Cuomo,C.A., Dewar,K.,
            FitzGerald,M.G., Kodira,C.D., Madan,A., Qin,S., Yang,X., Abbasi,N.,
            Abouelleil,A., Arachchi,H.M., Baradarani,L., Birditt,B., Bloom,S.,
            Bloom,T., Borowsky,M.L., Burke,J., Butler,J., Cook,A.,
            DeArellano,K., DeCaprio,D., Dorris,L. 3rd, Dors,M., Eichler,E.E.,
            Engels,R., Fahey,J., Fleetwood,P., Friedman,C., Gearin,G.,
            Hall,J.L., Hensley,G., Johnson,E., Jones,C., Kamat,A., Kaur,A.,
            Locke,D.P., Madan,A., Munson,G., Jaffe,D.B., Lui,A., Macdonald,P.,
            Mauceli,E., Naylor,J.W., Nesbitt,R., Nicol,R., O'Leary,S.B.,
            Ratcliffe,A., Rounsley,S., She,X., Sneddon,K.M., Stewart,S.,
            Sougnez,C., Stone,S.M., Topham,K., Vincent,D., Wang,S.,
            Zimmer,A.R., Birren,B.W., Hood,L., Lander,E.S. and Nusbaum,C.
  TITLE     Analysis of the DNA sequence and duplication history of human
            chromosome 15
  JOURNAL   Nature 440 (7084), 671-675 (2006)
   PUBMED   16572171
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC120045.19, DB098469.1 and DB054802.1.
            
            On Aug 14, 2020 this sequence version replaced NM_001282472.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            CCDS Note: The exon combination of this CCDS representation is
            inferred. It is supported by partial transcript alignments and by
            paralogous golgin A8 family alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2148093 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            MANE Ensembl match        :: ENST00000567927.2/ ENSP00000456401.1
            RefSeq Select criteria    :: based on manual assertion,
                                         conservation, expression, longest
                                         protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-146               AC120045.19        65428-65573
            147-553             DB098469.1         167-573
            554-687             DB054802.1         443-576
            688-689             AC120045.19        70156-70157
            690-776             AC120045.19        71213-71299
            777-884             AC120045.19        71406-71513
            885-972             AC120045.19        71709-71796
            973-1229            AC120045.19        72173-72429
            1230-1298           AC120045.19        72685-72753
            1299-1374           AC120045.19        74008-74083
            1375-1466           AC120045.19        74515-74606
            1467-1567           AC120045.19        75181-75281
            1568-1665           AC120045.19        75364-75461
            1666-1821           AC120045.19        75557-75712
            1822-5188           AC120045.19        75797-79163
FEATURES             Location/Qualifiers
     source          1..5188
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
                     /map="15q13.2"
     gene            1..5188
                     /gene="GOLGA8J"
                     /note="golgin A8 family member J"
                     /db_xref="GeneID:653073"
                     /db_xref="HGNC:HGNC:38650"
     exon            1..146
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     CDS             99..1997
                     /gene="GOLGA8J"
                     /note="Golgin subfamily A member 8-like protein 3"
                     /codon_start=1
                     /product="golgin subfamily A member 8J"
                     /protein_id="NP_001269401.1"
                     /db_xref="CCDS:CCDS61574.1"
                     /db_xref="GeneID:653073"
                     /db_xref="HGNC:HGNC:38650"
                     /translation="MAEETQHNKLAAAKKKLKEYWQKNSPRVPAGANRNRKTNGSIPE
                     KATSGGCQPPRDSATGFHREGPTSSATLKDLESPCQERAVVLDSRSVEISQLKNTIKS
                     LKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQKEELNTDLYHMKRSLRYFE
                     EKSKDLAVRLQHSLQRKGELESVLSNVMATQKKKANQLSSRSKARTEWKLEQSMREEA
                     LLKVQLTQFKESFQQVQLERDEYSEHLKGERARWQQRMRKMSQEICTLKKEKQQDMRR
                     VEKLERSLSKLKNQMAEPLPPEPPAVPSEVELQHLRKELERVAGELQAQVKNNQRISL
                     LNQRQEERIREQEERLRKQEERIQEQHKSLQQLAKPQSVFKEPNNENKNALQLEQQVK
                     ELQEKLGEEHLEAASQQNQQLTAQLSLMALPGEGHGGEHLDSEGEEAPRPMPSVPEDP
                     ESREAMSSFMDHLEEKADLSELVKKKELCFIHHWRERCHQKTHHLLSEPGGRAKDAAL
                     GGGHHQAGAQGGDEGEAAGAAADGIAAYSNYNNGHRKFLAAAHNSADEPGPGAPAPQE
                     LGAADKHGHLCEVSLTSSAQGEAREDPLLDKPTAQPIVQDHQEHPGLGSNCCVPFLCW
                     AWLPRRRR"
     exon            147..266
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            267..326
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            327..407
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            408..446
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            447..494
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            495..579
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            580..689
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            690..776
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            777..884
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            885..972
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            973..1229
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            1230..1298
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            1299..1374
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            1375..1466
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            1467..1567
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            1568..1665
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            1666..1821
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     exon            1822..5188
                     /gene="GOLGA8J"
                     /inference="alignment:Splign:2.1.0"
     regulatory      5166..5171
                     /regulatory_class="polyA_signal_sequence"
                     /gene="GOLGA8J"
                     /note="hexamer: AATAAA"
     polyA_site      5188
                     /gene="GOLGA8J"
                     /note="major polyA site"
ORIGIN      
        1 agtcacacag ctgcctggta ggtgactgga ggccttgatc ggttctcatt gagattttgc
       61 tgctgtgacc ccaaccctgc ctccctcccc accctgcgat ggcagaagaa actcaacaca
      121 acaaattggc tgcagccaag aaaaagttaa aagaatattg gcagaaaaac agccctagag
      181 ttccagcagg agcgaacagg aacaggaaaa caaatggcag tatccctgag aaagccactt
      241 ctggtggttg ccagccacct agggattcag caacaggttt ccacagggaa ggccctacat
      301 catctgctac cctgaaagat ctggagagcc cgtgccaaga acgagcagta gtcctggatt
      361 caaggtccgt agaaatcagt caactgaaga acaccatcaa atctctgaaa caacagaaga
      421 aacaagtgga acatcagctg gaagaagaaa agaaagcaaa caacaagaaa cagaaagcca
      481 aaagggtgct agaggttcaa atccagacat tgaacataca gaaagaggaa ctaaatacgg
      541 acctgtacca catgaaacgt tctctcagat actttgaaga aaagtccaag gatctggctg
      601 tccgcctgca acattcattg cagcgtaaag gagagttaga gagtgttctc tctaatgtca
      661 tggccacaca gaagaagaag gcaaaccagt tgtccagccg cagcaaagca cgtacggagt
      721 ggaagttaga gcagtccatg cgggaggagg cactactgaa agtgcagctg acacagttca
      781 aggagtcatt tcaacaagtc caattagaaa gagatgagta ttctgaacat ctaaaaggag
      841 agagggcccg gtggcagcag aggatgagaa aaatgtcgca ggagatttgc acattaaaga
      901 aagagaagca gcaagatatg cgtcgggtag agaagctgga gaggagcttg tccaaactca
      961 aaaaccagat ggctgaaccc ttgcccccgg agcccccagc agtgccctct gaggtggagc
     1021 tgcagcacct gaggaaggaa ctagagagag tggcaggaga gctccaggcc caggtcaaaa
     1081 acaatcagcg cataagtctc ctgaaccagc gacaagaaga gaggattcgg gagcaggaag
     1141 agaggcttcg gaagcaggag gagaggattc aggagcagca caagagcctt cagcagctgg
     1201 ccaagccaca gagcgtcttc aaggagccga acaatgagaa caagaacgca ctgcagttgg
     1261 agcagcaagt aaaggagcta caggagaagc ttggcgagga gcacctggaa gctgccagcc
     1321 agcagaacca gcagctaacg gcccagctga gcctcatggc tctccctggg gaaggacacg
     1381 gaggagaaca tctggacagt gagggggagg aggcacctcg gcccatgccg agtgtcccag
     1441 aggacccgga gagcagggag gccatgagca gctttatgga ccacctggag gagaaggcag
     1501 acctgagtga gctggtgaag aaaaaagaac tctgcttcat ccaccactgg cgagagagat
     1561 gccatcagaa aacccatcac cttttatcag aaccaggggg ccgtgccaaa gatgcggcac
     1621 tgggaggagg acaccatcag gctggagctc agggaggaga tgaaggtgaa gctgctggag
     1681 ctgcagcaga tggtattgcg gcttacagca actacaacaa tgggcacaga aaattcctgg
     1741 ccgctgccca caactctgct gatgagcccg gtccaggagc cccagccccc caggagcttg
     1801 gggctgcaga caagcatggt catctttgtg aggtgagcct cacctcctct gcccaaggag
     1861 aggccaggga ggatcctctc cttgacaagc ctactgcaca gccgatcgtg caggaccacc
     1921 aggagcaccc aggcttgggc agcaactgct gtgtgccatt cttgtgctgg gcttggctgc
     1981 caagaagaag gagataaaca tcaccatcct caaagagctg ctcaagaaat ttttaaataa
     2041 gaaaccaagt tatggggtta atctcctaca caattcattt acttcctttg aatgttagag
     2101 tcactcatga ttatttgttt ttctaattta tagttttaag tttatttgta aaaagttaaa
     2161 agagagtggg tgtctgtggc tctcactgat gttcactctg gcatccttta gcatttttct
     2221 tttttaattt cataattgta ggtcattagc gtgcatatcg agtttgccct tacgtggtgg
     2281 gagttcaaac acacaaagac ccactctttg cccaaaactg ttctctttgg tttggaatag
     2341 gctgccatgc ttttttaatg ttattgcagc atgtatattc actacagaat tcagacaaaa
     2401 tttgcctatg ttctgctgtt gtttgatcta atcttaatca cagtgagctc ttcattagct
     2461 caatatgtag tttgccccca agtgtgcact gtttattact ttgtaatatg ccactatgag
     2521 tactgacatt tagagttgtt taaaggccaa gaactggaaa cagcctttcc tccattttct
     2581 gtgtgttggt gatgggagtg ataacctttt gggggagctt tttaaatctc acagaagagg
     2641 aaagtggcct cctctggcag gtacgtgcag gatagagtgt gtttcatctg ttccggtgcc
     2701 cggaattagc agtgtattat ggtggttccc ttaggatttg tatgtgctct gggctcatga
     2761 agatactgca tcatgagctg cagcagttgt actctttttc gatgacctaa aaagggctta
     2821 tttctgagga atgaaaggtt cccatcattg actgtggatg tgggaaacct ttcctagctt
     2881 agagcatttg tatctacaat acattttaaa gtcagagttc atgttacctg ttttaatcac
     2941 atgactacat gtcccagtac acaaaagggc actggttggc attcttctta atgtatttag
     3001 tgaagatcat aagaaatcct ttatgagttc aaacgttcct ggaacaggca tacaggctct
     3061 agtcaagaat gaattagagt gaaggaaagc tgtgtgacac ctggcattcc tctctgttca
     3121 cggagattct ttgaggcttg aagattgatt ttaccatcta gacctctttg gctaatacct
     3181 attcttcaac caccttggtt actctgacat aggaatttac ttctttttct ttgaatggaa
     3241 aacactttaa aaaataatag aaacattatt ataaactaat atatgtgaga tacttagttg
     3301 aaacaaaaag gagttttagt agacggtatt gtactctctt tgaaaatcaa ggagaagttt
     3361 atgaaactta aaatgtgtac aaactgcagt gcaatctact gttcgtgaat gtcaatgtat
     3421 tatcaggaaa cgtgtctata caatcacaga gttatatttt ctcacagact tctttacaaa
     3481 gtgaaatatg tttttgtacc tctgggtttc tgttcgggac atattttgtg caatatttat
     3541 gtgattgtgc ctatgcatga tgaatgaata catttcagtt atatattgcc taaatcataa
     3601 cttgatgatg cttgggaaag actcaacagt taaaacttca tgaagttcta atgtctgtgt
     3661 tccaaaacac atcacattgt taggatgcag ggagataggt gtgtgtgctc cctgcggtgg
     3721 ggatttctag ttactagatc atctccattt ttagcatttg gcatcctcat gatacttcta
     3781 taaatatgac attaacagga gagcaacaat acgattttac cgatggaata acagatttgc
     3841 tggcattcac tgaaagagtg caaatattcg gtccttgtga cttccactga ctcttccaaa
     3901 ttttatgaat gtatcaatgt attagataaa cccagtttca gaatgataaa gaaaaaattt
     3961 agaccaaata atgcagctaa ttaacagtgg tacgatttgt agcccgtggg tttaaaatgc
     4021 acttaaagtc ctgttctcgc cttttatttt ctgaacttgc cgcttttgca ttctttgagt
     4081 tcagtttaaa gacagttact ttaagagcat tttaaaccct cgggctagaa atcggaccac
     4141 tgttaatcag ccacattatt tggtctaacg ttttttcttt tatcattctg aaactgggtt
     4201 tatctaatac attgataaat tattgcaaag gtacttttat cgttgaaatc acttcacttt
     4261 taccctgata aatatcagtg actaggaatg accttcggat agcgtttagc atctgtaacc
     4321 aatctgacaa taatgtgttc atgaggtgcc tatggattaa atcacacact ggcatattta
     4381 agctgaaggt cagtctggaa aataaattta ctatattgac tgaaatacca ctctttgtgt
     4441 aggtatttgt catatattta agaaaaagtt aaaaagaatg gaaattgtat gacaataact
     4501 caagtctttc tccaaagtgc atgcagtctt ttgcgatacc tcattcagcc gagtatttgt
     4561 gctcttcctc attcagtata aggcagcttt cagtttgctt agaaggcaac attggaatgt
     4621 tagagttcat cagaaacata gaattttaaa ctgtgagttc cactgaatac attttaatgt
     4681 ctgtaggaag aatcaaaaca cctatttaaa gatggcaata tataataatc attttaaaag
     4741 tatttgattc aacctgataa ttttccagaa atgaaaaaaa aaaatcagct ctaaaaccaa
     4801 agctgatttt agaaaatttg aaaatgtaaa tcagccctat ccataatata gtttctctaa
     4861 aactttattt taaagagtca ttttaaaata atataactat taaaaaatgt aactgctatc
     4921 ttaatgttct gaaataattt aaaacatttt aaaatatgaa tactgtagta taaaagaaag
     4981 aaatggtggg aacgaaaagc agagaaagaa atgccaattc cagtccaaag ttttatttgc
     5041 caagttttct tagaatgaat tttaccagtt tatgaattat tgtaaagaga atgtgtcgtg
     5101 gaaatactga aagatttttc cctagagtgg ccttattgac tgctggtgtg atgccactgt
     5161 aatgtaataa attattaagt tgtttcaa
//
