LOCUS       NM_001350920            4967 bp    mRNA    linear   PRI 07-APR-2024
DEFINITION  Homo sapiens golgin A8 family member F (GOLGA8F), mRNA.
ACCESSION   NM_001350920
VERSION     NM_001350920.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4967)
  AUTHORS   Jiang,Y.H., Wauki,K., Liu,Q., Bressler,J., Pan,Y., Kashork,C.D.,
            Shaffer,L.G. and Beaudet,A.L.
  TITLE     Genomic analysis of the chromosome 15q11-q13 Prader-Willi syndrome
            region and characterization of transcripts for GOLGA8E and WHCD1L1
            from the proximal breakpoint region
  JOURNAL   BMC Genomics 9, 50 (2008)
   PUBMED   18226259
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4967)
  AUTHORS   Szafranski,K., Schindler,S., Taudien,S., Hiller,M., Huse,K.,
            Jahn,N., Schreiber,S., Backofen,R. and Platzer,M.
  TITLE     Violating the splicing rules: TG dinucleotides function as
            alternative 3' splice sites in U2-dependent introns
  JOURNAL   Genome Biol 8 (8), R154 (2007)
   PUBMED   17672918
  REMARK    GeneRIF: the apparent occurrence of an unusual TG 3' splice site in
            intron 11 is discussed
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC091304.15.
            
            On Apr 22, 2020 this sequence version replaced NM_001350920.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2148093 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            MANE Ensembl match               :: ENST00000526619.7/
                                                ENSP00000456138.3
            RefSeq Select criteria           :: based on manual assertion,
                                                conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-146               AC091304.15        97877-98022
            147-266             AC091304.15        99720-99839
            267-326             AC091304.15        100425-100484
            327-407             AC091304.15        100668-100748
            408-446             AC091304.15        101603-101641
            447-494             AC091304.15        101915-101962
            495-579             AC091304.15        102051-102135
            580-689             AC091304.15        102231-102340
            690-779             AC091304.15        103360-103449
            780-887             AC091304.15        103556-103663
            888-975             AC091304.15        103859-103946
            976-1232            AC091304.15        104338-104594
            1233-1301           AC091304.15        104862-104930
            1302-1377           AC091304.15        106302-106377
            1378-1469           AC091304.15        106815-106906
            1470-1570           AC091304.15        107481-107581
            1571-1671           AC091304.15        107664-107764
            1672-1824           AC091304.15        107854-108006
            1825-4967           AC091304.15        108092-111234
FEATURES             Location/Qualifiers
     source          1..4967
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
                     /map="15q13.1"
     gene            1..4967
                     /gene="GOLGA8F"
                     /note="golgin A8 family member F"
                     /db_xref="GeneID:100132565"
                     /db_xref="HGNC:HGNC:32378"
     exon            1..146
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     CDS             99..2009
                     /gene="GOLGA8F"
                     /note="golgi autoantigen, golgin subfamily a, 8F; golgin
                     A8 family, member F pseudogene; golgin-like hypothetical
                     protein LOC440321"
                     /codon_start=1
                     /product="putative golgin subfamily A member 8F"
                     /protein_id="NP_001337849.2"
                     /db_xref="CCDS:CCDS86437.2"
                     /db_xref="GeneID:100132565"
                     /db_xref="HGNC:HGNC:32378"
                     /translation="MAEETRQSKLAAAKRKLKEYWQRNSPGVPAGAKRNRKTNGSIHE
                     TATSGGCHSPGDSATGIHGESPTSSATLKDLESPCQELAVVPDSRSVKVSQLKNTIKS
                     LKQQNKQVEHQLEEEKKANNEKQKAERELEVQIQRLNIQKGKLNTDLYHTKRSLRYFE
                     EESKDLAVRLQHSLQRKGELERALSAVTATQKKKAERQFSSRSKARMEWKLEQSMREQ
                     ALLKAQLTQLKESLKEVQLERDEYAEHLKGERARWQQRMRKMSQEVCSLKKEKKHDKY
                     RVEKLERSLSKLKHQMAEPLPPEPPAVPSEVELQHLRKELERVAGELQAQVEYNQRIS
                     LLNEGQKERLREQEERLQEQQERLPEQEERLQQLAEPQNSFKELNNENKSVLQLEQQV
                     KELQEKLGKERLEAASQQKQQLTAQLSLMALPGEGDGGGHLDSEGEEAPRPIPSIPQD
                     LESREAMSGFMDHLEEKADLSELVEKEELGFFQYYRERCHQKVYHPITKPGGSAKDAA
                     PGGGHHQAGPGQGGDEGEAAGAAGDGVAAGGDYKGHSKFLVTAQNPAHEPSPGAPAPQ
                     ELGAAHKHGDLCEVSLTDSVEPVQGEAREGSPHDNPTAQPIVQDHQEHPGLGSNCCVP
                     FFCWAWLPRRRR"
     exon            147..266
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            267..326
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            327..407
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            408..446
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            447..494
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            495..579
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            580..689
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            690..779
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            780..887
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            888..975
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            976..1232
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            1233..1301
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            1302..1377
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            1378..1469
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            1470..1570
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            1571..1671
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            1672..1824
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
     exon            1825..4967
                     /gene="GOLGA8F"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtcgcacag ctacctggta ggtgactgga ggtgttgatc agtgcttggt gggattttgc
       61 tgatgtggcc ccaagcccgc ctccctcccc accctgcgat ggcagaagaa actcgacaaa
      121 gtaaattggc agcagccaag agaaagttaa aagaatattg gcagagaaac agccctggtg
      181 ttccagcagg agccaagagg aacaggaaaa caaatggcag catccatgag acagccactt
      241 ctggtggttg ccactcacct ggagattcag caacaggtat ccacggggag agccctacat
      301 catctgctac cctgaaggat ctggagagcc cgtgccaaga actagcagta gtcccagact
      361 cgaggtccgt aaaagtcagt caactgaaga acaccatcaa atctttgaaa caacagaata
      421 aacaagtgga acatcagctg gaagaagaaa agaaagcaaa caacgagaaa cagaaagccg
      481 aaagggagct agaggttcaa atccagagat tgaacataca gaaagggaaa ctaaatacgg
      541 acctgtacca cacgaaacgt tctctcagat actttgaaga agagtccaag gatctggccg
      601 tccgtctgca acattcattg cagcgtaaag gagagttaga gcgggctctc tctgctgtca
      661 ccgccacaca gaagaagaag gcggagaggc agttctccag ccgcagtaaa gcacgtatgg
      721 agtggaagtt agagcagtcc atgcgggagc aggcactgct gaaagcgcag ctgacacagt
      781 tgaaggagtc acttaaagaa gtccagctag agagggatga atatgctgaa catctaaaag
      841 gagagagggc ccggtggcag cagaggatga gaaaaatgtc gcaggaggtt tgctcgttga
      901 agaaggagaa gaagcatgat aaatatcggg tagagaagct ggagaggagc ttgtccaaac
      961 tcaaacacca gatggctgaa cctctgcccc cggagccccc agcagtgccc tctgaggtgg
     1021 agctgcagca cctgaggaag gaactagaga gagtggcagg agagctccag gcccaggtgg
     1081 agtacaatca gcgcataagt ctcctgaatg aggggcaaaa ggagaggctt cgggagcagg
     1141 aggagaggct tcaggagcag caggagaggc ttccagagca ggaggagagg cttcagcagc
     1201 tggccgagcc acagaacagc ttcaaggagc tgaacaatga gaacaagagc gtactacagt
     1261 tggagcagca agtaaaggag ctgcaggaga agctaggcaa ggagcgtctg gaagctgcga
     1321 gccagcagaa acagcagcta acggcccagt tgagcctcat ggctctccct ggggaaggag
     1381 atggaggagg acatctggac agtgaggggg aggaggcacc tcggcccatt cctagcatcc
     1441 cacaggacct ggagagcagg gaggccatga gcggctttat ggaccacctg gaggagaagg
     1501 cagacctgag tgagctggtg gagaaagaag aacttggatt cttccagtac tacagagaga
     1561 gatgccatca gaaagtttat caccctataa caaagccagg gggcagtgcc aaagatgcag
     1621 caccgggagg aggacaccat caggctggcc ctggacaggg aggagatgaa ggtgaagctg
     1681 ctggagctgc aggagatggt gttgcagctg gtggcgacta caagggacac agcaaattct
     1741 tggtgactgc ccagaaccct gctcatgagc ccagtccagg agccccagcc ccccaggagc
     1801 ttggggctgc ccacaagcat ggtgatcttt gtgaggtgag cctcactgac agcgtggagc
     1861 ctgtgcaagg agaggccagg gagggttctc cccacgacaa ccctactgca cagccgatcg
     1921 tgcaggacca ccaggagcac ccaggcttgg gcagcaactg ctgtgtgcca ttcttttgct
     1981 gggcttggct gccaagaaga aggagataaa catcaccatc gtcaaagagc tgctgaagaa
     2041 atttttaaaa aagaaacaaa gttatggggt taatctccta cacaattcat ttacttcatt
     2101 tgaatgttat agccacttat gattatttgt gtttctaatt tatagtttaa gttcatttgt
     2161 aaatagttaa aagagagtgg gtctctgtgg ctttcactga tgttcactct ggcatacttt
     2221 cgcaattttc tttttcaatt tcataattgt aggtcattag catgcatatt gagtttgccc
     2281 ttacgtggtg ggagttcaaa cacacaaaga cccactattt gcacaaaact attcttgctg
     2341 gtttggaata ggctgccatg tgtttttaat gttattgcag catgtatatt cattacagaa
     2401 ttcagataaa atgtgcctat gttctgctgt tgtttgatct aatcttaatc acagtgagct
     2461 cttcattagc acaatatgtg gtttgcccca agtgtgcact atttaatact ttgtaatatg
     2521 ccaccaagag tactgacatt tagagttgtt taaaggccga gaactggaaa cagcctttcc
     2581 ctcattttct gtgtattggt gatgggagta ataacatttt gggggagctt tttaaatttc
     2641 acagaagagg aaagttgcct gctctggcag gtatgtgcaa gatagagtgt gtttcatttg
     2701 ttctgttgcc aagaattagt gctgtactat tgtagttcct ttaggatttg tatgtgctct
     2761 gggctcatga agatattgca tcatgagctt cagcagttgt actctttttt gatgacctaa
     2821 aaagggctta tttctgagga atgaaaggtt cccatcattg actacggatg tggaaaacct
     2881 ttcctagctt agagcatttg tatctatatt ttaaagtcag agttcatgtt acctgtttta
     2941 atcacatgac tgcatgtccc agtacacaaa agggcactgg ttggcattct tcttaatgta
     3001 tttagtaaag atcataagaa atcctttaag agttcaaatg tccctggaac aggcatacaa
     3061 gctctagtca agaatgaatt agagtgaagg aaagctgtgt gacacctggc attcctctgt
     3121 tcatggagct tctttgaggc ttgaagattg attttaccat ctagaccact ctgcctattc
     3181 ttcaaccacc ttggttactt tgacatagga attgacttct tttccttgaa tggaaaacac
     3241 tttgaaataa taataaacat tgttataaac taatatatgt gagagtgctt agttgaaaca
     3301 aaaaggagtt ttagtagaca gtattatact atctttgaaa atcaaggaga agtttatgca
     3361 acttaaaatg tgtacaaact gcagtgcaat ctactgttgg tgaatgtcag tgtattatca
     3421 ggaaacatgt ctatacaatc acagagttat atttcctcac aaacttcttt gtgaagagtg
     3481 aaatgtgttt ctgtacctct gggtttcact tacgggcata ttttgtgcag tatttatgtg
     3541 attgtgccta tgcatgatga atgaatgaat ttcagttgta cattgcctaa atcataactt
     3601 gatgatgctt gggaaagact caacagttaa aacttcatga agttctaatg tctgtgttcc
     3661 aaaacacatc acattattag gatgtaggga gatatgtatg tgtgctccct ggggtgggga
     3721 tttctagtta ctagaccatc tccattttta gcatttggca tcctcatgat acttttataa
     3781 atacgacatt aacaggagag cagcagtacg attttgccga tggaataaca gatttgccgg
     3841 caatcactga aagagtgcaa acatcgggtc cttgtgactt caacggactc ttccaaattg
     3901 tatgaatgta tcaatgtatt agataaaccc agtttcagaa tgataaagaa aaaatgttag
     3961 accaaataat gcggctagtt aacagtggta cgatttctcg cccgtggctt taaaatgcac
     4021 ttaaagtcct gtccttgcct tttattttct gaacttgatg tttttgcatt ctttgagttc
     4081 agtttaaaga caactacgag catctgtaac caatctgaca ataatgtgtt catcaggtgc
     4141 ctgtggatta aatcacatac tggcatattt aagctgaatg tcaatctgga aaataaattg
     4201 actgtattaa cggaaatacc actctttgtg tagatatttg tcgtatattt aagaaaaagc
     4261 taaaaagaat ggaaatcgca tgactataac ttaagtcttt cttcaaagtg catgcagtct
     4321 tttgcgatac ctcattcagc caagtattgg tattcttcct cattcggtat aaggcagctt
     4381 tcaatttgct tagagggcaa cattggaagg ttagagttca tcagaaacag aattctaaaa
     4441 tgtgagttca attcaataaa tttgaatttc tgtaggaaga atcaaatcac cgatttaaag
     4501 attgcaatat ataataatca tttttaaagt attggattaa atctgatagg ttttccagaa
     4561 atgaacaaaa atcagctcta aaaccaaagc tgatttttag aaaatttgaa aatgtaaatc
     4621 agccctatcc atactatagt ttctctaaaa ctttatctga aacagtcatt ttaaaataac
     4681 tattaaacaa tgtaactgct atcttaatgt tctgaaataa gttaaaacat tttaaaatat
     4741 gaatactgta aaggaaataa acggtgggaa ggaaaagtag agaaagaaat gccaattcca
     4801 gtccaaagct ttatttgcca agttttctta gaatgaattt taccaattta tgaattcttg
     4861 taagcggaat gtaaaacgga aatactgaaa gacttttgcc taaagtggca ttattgactg
     4921 ctggtgtgat gctactgtaa tgtaataaat tattaagttg ttgcaaa
//
