LOCUS       NM_001145004            4013 bp    mRNA    linear   PRI 25-SEP-2024
DEFINITION  Homo sapiens golgin A6 family like 6 (gene/pseudogene) (GOLGA6L6),
            mRNA.
ACCESSION   NM_001145004 XM_001723325 XR_037552
VERSION     NM_001145004.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4013)
  AUTHORS   Zody,M.C., Garber,M., Sharpe,T., Young,S.K., Rowen,L., O'Neill,K.,
            Whittaker,C.A., Kamal,M., Chang,J.L., Cuomo,C.A., Dewar,K.,
            FitzGerald,M.G., Kodira,C.D., Madan,A., Qin,S., Yang,X., Abbasi,N.,
            Abouelleil,A., Arachchi,H.M., Baradarani,L., Birditt,B., Bloom,S.,
            Bloom,T., Borowsky,M.L., Burke,J., Butler,J., Cook,A.,
            DeArellano,K., DeCaprio,D., Dorris,L. 3rd, Dors,M., Eichler,E.E.,
            Engels,R., Fahey,J., Fleetwood,P., Friedman,C., Gearin,G.,
            Hall,J.L., Hensley,G., Johnson,E., Jones,C., Kamat,A., Kaur,A.,
            Locke,D.P., Madan,A., Munson,G., Jaffe,D.B., Lui,A., Macdonald,P.,
            Mauceli,E., Naylor,J.W., Nesbitt,R., Nicol,R., O'Leary,S.B.,
            Ratcliffe,A., Rounsley,S., She,X., Sneddon,K.M., Stewart,S.,
            Sougnez,C., Stone,S.M., Topham,K., Vincent,D., Wang,S.,
            Zimmer,A.R., Birren,B.W., Hood,L., Lander,E.S. and Nusbaum,C.
  TITLE     Analysis of the DNA sequence and duplication history of human
            chromosome 15
  JOURNAL   Nature 440 (7084), 671-675 (2006)
   PUBMED   16572171
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC023310.4.
            
            On Apr 11, 2014 this sequence version replaced NM_001145004.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            CCDS Note: The coding region has been updated to correct several
            errors that were present versus the GRCh38 reference genome
            assembly.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2158188 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            MANE Ensembl match        :: ENST00000619213.1/ ENSP00000480376.1
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-253               AC023310.4         116368-116620
            254-382             AC023310.4         118267-118395
            383-433             AC023310.4         119482-119532
            434-527             AC023310.4         119621-119714
            528-634             AC023310.4         119810-119916
            635-693             AC023310.4         121296-121354
            694-835             AC023310.4         121685-121826
            836-2266            AC023310.4         122479-123909
            2267-4013           AC023310.4         124566-126312
FEATURES             Location/Qualifiers
     source          1..4013
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
                     /map="15q11.2"
     gene            1..4013
                     /gene="GOLGA6L6"
                     /note="golgin A6 family like 6 (gene/pseudogene)"
                     /db_xref="GeneID:727832"
                     /db_xref="HGNC:HGNC:37225"
     exon            1..253
                     /gene="GOLGA6L6"
                     /inference="alignment:Splign:2.1.0"
     CDS             92..2266
                     /gene="GOLGA6L6"
                     /note="golgi autoantigen, golgin subfamily a, 6-like 6;
                     putative golgin subfamily A member 6-like protein 6"
                     /codon_start=1
                     /product="golgin subfamily A member 6-like protein 6"
                     /protein_id="NP_001138476.2"
                     /db_xref="CCDS:CCDS45184.1"
                     /db_xref="GeneID:727832"
                     /db_xref="HGNC:HGNC:37225"
                     /translation="MLMWPQPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPMMSKETR
                     QSKLAEAKEQLTDHHPQTNPSVGTAASDTKKKKINNGTNPETTTSGGCHSPEDEQKAS
                     HQHQEALRRELEAQVHTIRILTCQKTELQMALYYSQHAVKQLEGEARDLISRLHDSWK
                     FAGELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEKNAELQEKL
                     QLVESEKSEIQLNVKELKRKLERAKLLLPQQQLQAEADHLGKELQSVSAKLQAQVEEN
                     ELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWE
                     KEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEK
                     IREQEKRQEQEAKMWRQEEKIREQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQE
                     EMWRQEEKIREQEEIWRQKEKMHEQEEKIRKQEEKVWRQEEKIREQEEKIREQEEKMW
                     RQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDKMWRQEEKIREQEEKVWRQEEK
                     IREQEEKRQEQEEKMWKQEEKIREQEEKIREQEEKIREQEEKIREQEEMTQEQEEKMG
                     EQEEKMCEQEEKMQEQEETMWRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQ
                     EEKMCEQEEKMQEQEEKMRRQEEKMWEQEVRLRQQEEKMQEH"
     exon            254..382
                     /gene="GOLGA6L6"
                     /inference="alignment:Splign:2.1.0"
     exon            383..433
                     /gene="GOLGA6L6"
                     /inference="alignment:Splign:2.1.0"
     exon            434..527
                     /gene="GOLGA6L6"
                     /inference="alignment:Splign:2.1.0"
     exon            528..634
                     /gene="GOLGA6L6"
                     /inference="alignment:Splign:2.1.0"
     exon            635..693
                     /gene="GOLGA6L6"
                     /inference="alignment:Splign:2.1.0"
     exon            694..835
                     /gene="GOLGA6L6"
                     /inference="alignment:Splign:2.1.0"
     exon            836..2266
                     /gene="GOLGA6L6"
                     /inference="alignment:Splign:2.1.0"
     exon            2267..4013
                     /gene="GOLGA6L6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attctagtgc agccctggtt acgcctcctc tggctcagtc acacagcgac gtagaggtga
       61 ctggaggtat atacttgtcc tcacctggat catgctgatg tggccccaac cccacctccc
      121 tacccatccc cacctcccta cccatcccca cctccctacc catccccacc tccctaccca
      181 tccccacctc cctacccatc ctatgatgtc caaagaaacc agacagagca aattggccga
      241 ggccaaggaa cagttgacag accatcatcc ccagaccaac cctagtgttg gtacagcagc
      301 aagcgacacc aaaaagaaga aaataaataa tggcactaac cctgagacaa ccacttctgg
      361 tggttgccac tcgcctgagg atgaacagaa ggcaagccat caacatcagg aagccctaag
      421 gagggagcta gaggcccagg ttcataccat acgaatcctt acatgtcaga aaactgagct
      481 tcagatggca ctctactaca gccagcatgc tgtcaagcag ttggaaggag aggccaggga
      541 tctgatcagc cgcctgcatg attcatggaa gtttgcagga gagttagagc aggctctctc
      601 tgctgtcgct acacagaaga agaaggcaga taggtacatt gaggagttaa caaaggagag
      661 ggacgccctg agtctggaac tgtacaggaa cacgataact gatgaggagc tgaaggagaa
      721 aaatgccgaa ctacaagaaa aacttcaact tgtagaatct gaaaagtctg agatccagct
      781 caacgtaaag gagctaaaaa ggaaactgga gagggccaag ctcctgctgc cacagcagca
      841 gctgcaggcg gaggctgacc acctgggtaa ggagctgcag agtgtgtcag caaagctcca
      901 agcccaggtg gaagagaacg agttgtggaa ccgcctgaac cagcaacagg aggagaagat
      961 gtggaggcag gaggagaaga tacaggagtg ggaggagaag atacaggagc aggaggagaa
     1021 gatacgggag caggaggaga agatacggga gcaggaggag aagatgcgga ggcaggagga
     1081 gatgatgtgg gagaaggagg agaagatgcg gaggcaggag gagatgatgt gggagaagga
     1141 ggagaagatg cggaggcagg aggagatgat gtgggagaag gaggagaaga tacgggagct
     1201 ggaagagaag atgcacgagc aggagaagat acgggagcag gaagagaaga ggcaggagga
     1261 ggagaagata cgcgagcagg agaagaggca ggagcaggag gcgaagatgt ggaggcagga
     1321 ggagaagata cgggagcagg aagagaagat acgggagcag gagaaaaaga tgtggaggca
     1381 ggaggagaag attcatgagc aggagaagat acgggaggag gagaagaggc aggagcagga
     1441 ggagatgtgg aggcaggagg agaagataag ggagcaggag gagatatgga ggcaaaagga
     1501 gaagatgcac gagcaggagg agaagatacg gaagcaggag gagaaggtgt ggaggcagga
     1561 ggagaagata cgggagcagg aggagaagat acgggagcag gaggagaaga tgtggaggca
     1621 ggaggagaag atacgggagc aggaggagat gtggagggag gaagagaaga tgcatgagca
     1681 ggagaagata tgggaggagg agaagaggca ggagcaggag gataagatgt ggaggcagga
     1741 ggagaagata cgggagcagg aggagaaggt gtggaggcag gaggagaaga tacgggagca
     1801 ggaggaaaag aggcaggagc aggaggagaa gatgtggaag caggaggaga agataaggga
     1861 gcaggaggag aagatacggg agcaggagga gaagatacgg gagcaggagg agaagatacg
     1921 agagcaggag gagatgacgc aggaacagga agagaagatg ggggagcagg aggagaagat
     1981 gtgtgagcag gaagagaaga tgcaagaaca ggaggagacg atgtggaggc aggaggagaa
     2041 gataagggag caggagaaga agatacggga gcaggaggag aagatacgag agcaggagga
     2101 gatgatgcag gaacaggaag agaagatgtg ggagcaggag gagaagatgt gtgagcagga
     2161 agagaagatg caagaacagg aggagaagat gcggaggcag gaggagaaga tgtgggagca
     2221 ggaagtgagg ctgcggcagc aggaggagaa gatgcaggaa cactaggagc acctggaagc
     2281 tgccatctaa tgagcacatg acaagaaggc aaagacaata aacatgtaaa agccggcagc
     2341 aaggcctgga gaagagtaag ccgccatgtg actgtttaga atatagtctg agcacaaacc
     2401 tgaaaaaaaa attttattta ttttaaattg tggcaaaata ctggccaggc atggtagctc
     2461 acgcctgtaa tcctagcaat ttgggaggcc gaggtaaatg gatgacctga ggtcaagagt
     2521 tcaagaccag cctggccaat acaaaaatta gccgggcatg gtggcgcatg cctgtaatcc
     2581 cagctacttg ggaggctgag gcaggagaat cgcttgaacc tgggaggcag aggttgcagt
     2641 gagctgagat cgtgccactg cactcaagcc tggtgacaga gcgaaactcc gtctcaaaaa
     2701 aaaaagtttc ttccttacat gtatgtttct attagttttc ttcttggtct ttctcattta
     2761 gtcttgtgtt gtcttttgac attcatagta aacttttatc tgcctccaga gagtattgac
     2821 tttgagttta tggcacacaa ttggagtaag ggcagatcgc cttcatctac tttgggacta
     2881 agctggttca aagcaggttt taggttttct gatggctggt ctatgtttta ttcatttgga
     2941 ctcccagggg tggcccttcc agggtcccca ccaaggtccc atctccttcc tgggacccaa
     3001 attctcatta ggtcatttca gccctgtgag agtgccaaac attcagctag gctctccagc
     3061 ctcttaacta ccacttcata ctcagtttct tagcctctta gccctctact gttgaccaat
     3121 caccaaatgt gggaaagcac tacagactgt caggatcacc tcctaggcct ggtcactcaa
     3181 gtcctgactg aggtctccaa ttaccttcca acaattgttt ttgattgggg gcggggcaca
     3241 tttttatcca gtttttctaa ctgctcttgt ggggaggcga atccgtaaca agctcctctg
     3301 cctttactga aagttgaaaa ccttcatctg tccttttttt gttgtttttg agatggagta
     3361 ttgcgctgtt gcccaggctc tagtgcaatg gcacgatctc tgctcactgt aacctctgcc
     3421 tcctgggttc aagcaattct cctgcctcag cttcccgagt agcgtgtgcc accatgcctg
     3481 gctaattttt ttttatacct ttaatagagg caggatttca ccatgttttc caggctggtc
     3541 tcgagctcct gactcaggtg atctacctgc ctcagcctcc caaagtgctg ggattacaag
     3601 tatgagccac tgcatctggc ccatctgtct tttaaaacat gtttttaatt ggaggtataa
     3661 tttctattag tgaaatgcac aggtctggtt tacattttga tgagttttaa ctcatttaac
     3721 attactatgg aacccacctc ctttgaagat acagagtatt tctatcatcc agaaagttct
     3781 cctgtgcttt catgctgtcc cgcactcccc cagcagctga tgaacatgct gaggacattg
     3841 gtactggatt ctggccgccc caaaagagcc gctttgacca ggcttaccca gcactaaatc
     3901 cctgcctgct ctctcaaaat ttccatcttt aaactggttg tacctataac cctccctcat
     3961 caagtcaata gataaacaaa ccctgaaaaa taaacaactc ttcctggccc agc
//
