LOCUS       NM_001304388            3499 bp    mRNA    linear   PRI 20-SEP-2024
DEFINITION  Homo sapiens golgin A6 family like 2 (GOLGA6L2), mRNA.
ACCESSION   NM_001304388
VERSION     NM_001304388.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3499)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC073446.17 and AC100756.5.
            
            On Jan 11, 2019 this sequence version replaced NM_001304388.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2148874 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000567107.6/ ENSP00000454407.1
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-146               AC073446.17        70984-71129
            147-275             AC073446.17        72789-72917
            276-305             AC073446.17        73727-73756
            306-356             AC073446.17        74015-74065
            357-653             AC073446.17        74154-74450
            654-712             AC073446.17        75719-75777
            713-854             AC073446.17        76107-76248
            855-2920            AC073446.17        76545-78610
            2921-3499           AC100756.5         1-579
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
                     /map="15q11.2"
     gene            1..3499
                     /gene="GOLGA6L2"
                     /gene_synonym="CT105"
                     /note="golgin A6 family like 2"
                     /db_xref="GeneID:283685"
                     /db_xref="HGNC:HGNC:26695"
     exon            1..146
                     /gene="GOLGA6L2"
                     /gene_synonym="CT105"
                     /inference="alignment:Splign:2.1.0"
     CDS             63..2792
                     /gene="GOLGA6L2"
                     /gene_synonym="CT105"
                     /note="golgi autoantigen, golgin subfamily a, 6-like 2;
                     cancer/testis antigen 105"
                     /codon_start=1
                     /product="golgin subfamily A member 6-like protein 2"
                     /protein_id="NP_001291317.1"
                     /db_xref="CCDS:CCDS76728.1"
                     /db_xref="GeneID:283685"
                     /db_xref="HGNC:HGNC:26695"
                     /translation="MWPQPHLPPHPMMSEKTRQNKLAEAKKKFTDYRQWNIAGVGTRA
                     TDTKKKKINNGTNPETTTSEGCHSPEDTQQNRAQLKEEKKASHQHQEALRREIEAQDH
                     TIRILTCQKTELETALYYSQDAARKFEDGNLGTPSSFNLALSQAFRGSPLGCVSTSLI
                     PGESKDLAGRLHHSWHFAGELQRALSAVSTWHKKADRYIEELTKERDALSLELYRNTI
                     TNEELKKKNAELQEKLRLAESEKSEIQLNVKELKRKLERAKFLLPQVQTNTLQEEMWR
                     QEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQE
                     KELREQKKLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKM
                     RDQEERMWEQDERLREKEERMREQEKMWEQVEKMREEKKMQEQEKKTRDQEEKMQEEE
                     RIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQEKMQE
                     QEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDVETGGEAAGAGEADVGAGGEDA
                     GSGAEDVGPGGEDVGAGREAAGEGGENAGAEEDVAAGGEDAGGEEDAGAGEEDMGPGG
                     EDARGGEDAGAGEEDAGGGGDDAGAGGEDAGAGREDAGAGGEDVGAGREDAGAGGEDV
                     GAGGEDVGAGRRRCGSSRGCRNRRRSCGNTRRCRSRRSGAEDVGPEGEDVGAGREAAG
                     EGGENAGAEDVAAGGEDAGEEEDAGGEDAGAAREDAGAGGDDVGAGREDAGAGGEDVG
                     AGGEDAGAGGEDAGAGGEDAGPGGEDAGAGGEDAGPGGEDAGAGGEDAGPGGEDVGPG
                     GEDVGAGGEDVGAGGDAREGGEDTRSEREDAGEAARARGAVLRALPPSLQSSL"
     exon            147..275
                     /gene="GOLGA6L2"
                     /gene_synonym="CT105"
                     /inference="alignment:Splign:2.1.0"
     exon            276..305
                     /gene="GOLGA6L2"
                     /gene_synonym="CT105"
                     /inference="alignment:Splign:2.1.0"
     exon            306..356
                     /gene="GOLGA6L2"
                     /gene_synonym="CT105"
                     /inference="alignment:Splign:2.1.0"
     exon            357..653
                     /gene="GOLGA6L2"
                     /gene_synonym="CT105"
                     /inference="alignment:Splign:2.1.0"
     exon            654..712
                     /gene="GOLGA6L2"
                     /gene_synonym="CT105"
                     /inference="alignment:Splign:2.1.0"
     exon            713..854
                     /gene="GOLGA6L2"
                     /gene_synonym="CT105"
                     /inference="alignment:Splign:2.1.0"
     exon            855..3499
                     /gene="GOLGA6L2"
                     /gene_synonym="CT105"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3478..3483
                     /regulatory_class="polyA_signal_sequence"
                     /gene="GOLGA6L2"
                     /gene_synonym="CT105"
                     /note="hexamer: AGTAAA"
     polyA_site      3499
                     /gene="GOLGA6L2"
                     /gene_synonym="CT105"
                     /note="major polyA site"
ORIGIN      
        1 agtcacatag ctgcgtggta cgtgactgga ggtgtatcct tgtcctcgtc tgaatcacgc
       61 tgatgtggcc ccaaccccac ctccctcccc accccatgat gtcagaaaaa accagacaga
      121 acaaattggc tgaggccaag aaaaagttta cagactatcg tcagtggaac attgctggtg
      181 ttggtaccag agcaactgac accaaaaaga agaaaataaa taatggcact aaccctgaga
      241 caaccacttc ggagggttgc cattcacctg aggatacaca acagaaccga gcgcagctga
      301 aagaagaaaa gaaggcaagc caccaacatc aggaagccct aaggcgggag atagaggccc
      361 aggatcatac aatacgaatt ctcacgtgtc agaaaactga actggagaca gcgctctatt
      421 acagccagga tgctgccagg aaatttgaag atgggaacct gggcacccca tcatccttca
      481 acctggcact ttcacaggcc tttaggggga gtcctttggg ctgtgtctca acctctctca
      541 ttccaggaga gtccaaggat ctcgccggcc gcttgcatca ttcctggcac tttgcaggag
      601 agttacagcg ggctctctct gctgtgtcca catggcacaa gaaggcagac aggtacatcg
      661 aggagttaac aaaggagagg gacgccctga gtctggaact gtacaggaac accataacca
      721 atgaggagct gaagaagaaa aatgccgaac tacaagaaaa acttcgactt gcagaatctg
      781 aaaagtctga gatccagctc aacgtgaagg agctaaaaag gaaactggag agggccaagt
      841 tcctgctgcc acaggttcaa accaacactt tgcaggagga gatgtggagg caggaggagg
      901 agctacggga gcaggaaaag aagatacgga agcaggagga gaagatgtgg agacaggagg
      961 agagactgcg ggagcaggag gggaagatgc gggagcagga ggagaagatg cggagacagg
     1021 agaagaggct gcgagagcag gagaaggagc tgcgggagca ggagaaggag ctgcgggagc
     1081 agaagaagct gcgggagcag gaggagcaga tgcaggagca ggaggagaag atgtgggagc
     1141 aggaggagaa gatgcgggag caggaagaga agatgtggag acaggaggag aggctgtggg
     1201 agcaggagaa gcagatgcgg gagcaggagc agaagatgcg ggaccaagag gagaggatgt
     1261 gggagcagga cgagaggcta cgggagaagg aggagaggat gcgggagcag gagaagatgt
     1321 gggagcaggt ggagaagatg cgggaggaga agaagatgca ggagcaggag aagaagacgc
     1381 gggaccagga ggagaagatg caagaggagg agaggatacg ggagcgggag aagaagatgc
     1441 gggaagagga ggagacgatg cgggagcagg aggagaagat gcagaagcag gaggagaata
     1501 tgtgggagca ggaagagaag gagtggcagc agcagaggct gccggaacag aaggagaagc
     1561 tgtgggaaca ggagaagatg caggagcagg aggagaagat atgggagcag gaggagaaga
     1621 tacgggacca ggaggagatg tgggggcagg agaagaagat gtggcggcag gagaagatgc
     1681 gggagcagga agatgtggag acaggaggag aggctgcagg agcaggagaa gcagatgtgg
     1741 gagcaggagg agaagatgcg ggatcaggag cagaagatgt gggaccagga ggagaggatg
     1801 tgggagcagg acgagaggct gcgggagaag gaggagagaa tgcgggagca gaagaagatg
     1861 tggcagcagg aggagaagat gcgggaggag aagaagacgc aggagcagga gaagaagaca
     1921 tgggaccagg aggagaagat gcgagaggag gagaggatgc gggagcggga gaagaagatg
     1981 cgggaggagg aggagatgat gcgggagcag gaggagaaga tgcaggagca ggaagagaag
     2041 atgcgggagc aggaggagaa gatgtgggag caggaagaga agatgcagga gcaggaggag
     2101 aagatgtggg agcaggagga gaagatgtgg gagcaggaag aagaagatgt gggagcagca
     2161 gaggctgccg gaacagaagg agaagctgtg ggaacacgag aagatgcagg agcaggagat
     2221 caggagcaga agatgtggga ccagaaggag aggatgtggg agcaggacga gaggctgcgg
     2281 gagaaggagg agagaatgcg ggagcagaag atgtggcagc aggtggagaa gatgcgggag
     2341 aagaagaaga cgcaggagga gaagatgcag gagcagcaag agaagatgca ggagcaggag
     2401 gagatgatgt gggagcagga agagaagatg caggagcagg aggagaagat gtgggagcag
     2461 gaggagaaga tgcgggagca ggaggagaag atgcgggagc aggaggagaa gatgcagggc
     2521 caggaggaga agatgcggga gcaggaggag aagatgcagg gccaggagga gaagatgcgg
     2581 gagcaggagg agaagatgcg gggccaggag gagaagatgt ggggccagga ggagaagatg
     2641 tgggggcagg aggagaagat gtgggggcag gaggagatgc gagagaagga ggagaggata
     2701 cgagatcaga aagagaagat gcaggagagg ctgccagagc acgaggagcg gtgctcagag
     2761 ccctgcctcc ctccctccaa agttctttgt aatatgagcc acactggcag tgtggagcct
     2821 gcaggaggag aggctgggga gggttctccg caggacaacc ccactgcaca ggagatcatg
     2881 cagctgtttt gtgggatgaa gaacgcccag cagtgcccag gattaggcag tacctcctgc
     2941 atcccattct tctaccgagg agacaagaga aagatgaaga tcatcaatat ctaaaagttg
     3001 gcactgtcaa caaggcctac agaagcataa gccgccatgt cactgtgtga atatagtctg
     3061 agcacaaact tgaaaaaaaa aaaaaaaaag aaaagaaaat ttactttaaa ttgtggtaaa
     3121 atactagcca ggccttgtgg ccgaaaccta caaccgcagc actttgggag acctagaggg
     3181 ggtggatcac ctgaggtcag gagttcaaga ccagcctggc caacatgatg aaaccccgtc
     3241 tctactaaaa atacaagtta gccgggcgtg gttgtgcacg cctgtaatca cagctactca
     3301 ggaggctgca gtgagccaag atcacaccac cgcattccag cctggatgac agagcgagat
     3361 tccatctcaa aaaaaaaaaa aaagtttcta cctgaggact ctgatatcta tgtatgtttc
     3421 tattgttttt cttcttggtc tttctcattt agtcttgttt tgttttatgg cattcctagt
     3481 aaacttttat gtgcctcca
//
