LOCUS       NM_001001413            3822 bp    mRNA    linear   PRI 03-APR-2024
DEFINITION  Homo sapiens golgin A6 family like 1 (GOLGA6L1), mRNA.
ACCESSION   NM_001001413 XM_929339
VERSION     NM_001001413.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3822)
  AUTHORS   Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
            Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
            Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
            Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
            Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
            Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
            Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
            Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
            Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
            Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
            Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S., Watanabe,S.,
            Yosida,M., Hotuta,T., Kusano,J., Kanehori,K., Takahashi-Fujii,A.,
            Hara,H., Tanase,T.O., Nomura,Y., Togiya,S., Komai,F., Hara,R.,
            Takeuchi,K., Arita,M., Imose,N., Musashino,K., Yuuki,H., Oshima,A.,
            Sasaki,N., Aotsuka,S., Yoshikawa,Y., Matsunawa,H., Ichihara,T.,
            Shiohata,N., Sano,S., Moriya,S., Momiyama,H., Satoh,N., Takami,S.,
            Terashima,Y., Suzuki,O., Nakagawa,S., Senoh,A., Mizoguchi,H.,
            Goto,Y., Shimizu,F., Wakebe,H., Hishigaki,H., Watanabe,T.,
            Sugiyama,A., Takemoto,M., Kawakami,B., Yamazaki,M., Watanabe,K.,
            Kumagai,A., Itakura,S., Fukuzumi,Y., Fujimori,Y., Komiyama,M.,
            Tashiro,H., Tanigami,A., Fujiwara,T., Ono,T., Yamada,K., Fujii,Y.,
            Ozaki,K., Hirao,M., Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N.,
            Inagaki,H., Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T.,
            Noguchi,S., Itoh,T., Shigeta,K., Senba,T., Matsumura,K.,
            Nakajima,Y., Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T.,
            Oyama,M., Hata,H., Watanabe,M., Komatsu,T., Mizushima-Sugano,J.,
            Satoh,T., Shirai,Y., Takahashi,Y., Nakagawa,K., Okumura,K.,
            Nagase,T., Nomura,N., Kikuchi,H., Masuho,Y., Yamashita,R.,
            Nakai,K., Yada,T., Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
  TITLE     Complete sequencing and characterization of 21,243 full-length
            human cDNAs
  JOURNAL   Nat Genet 36 (1), 40-45 (2004)
   PUBMED   14702039
REFERENCE   2  (bases 1 to 3822)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC116165.8.
            
            On Feb 4, 2009 this sequence version replaced NM_001001413.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968968,
                              SAMEA2161674 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            MANE Ensembl match        :: ENST00000614055.2/ ENSP00000478478.1
            RefSeq Select criteria    :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-289               AC116165.8         90053-90341
            290-418             AC116165.8         91988-92116
            419-469             AC116165.8         93202-93252
            470-563             AC116165.8         93341-93434
            564-670             AC116165.8         93530-93636
            671-729             AC116165.8         95015-95073
            730-871             AC116165.8         95404-95545
            872-2074            AC116165.8         96203-97405
            2075-3822           AC116165.8         98062-99809
FEATURES             Location/Qualifiers
     source          1..3822
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
                     /map="15q11.2"
     gene            1..3822
                     /gene="GOLGA6L1"
                     /note="golgin A6 family like 1"
                     /db_xref="GeneID:283767"
                     /db_xref="HGNC:HGNC:37444"
     exon            1..289
                     /gene="GOLGA6L1"
                     /inference="alignment:Splign:2.1.0"
     CDS             92..2098
                     /gene="GOLGA6L1"
                     /note="golgi autoantigen, golgin subfamily a, 6-like 1"
                     /codon_start=1
                     /product="golgin subfamily A member 6-like protein 1"
                     /protein_id="NP_001001413.3"
                     /db_xref="CCDS:CCDS73699.1"
                     /db_xref="GeneID:283767"
                     /db_xref="HGNC:HGNC:37444"
                     /translation="MLMWPQPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHLPTHPH
                     LPTHPMMSKETRQSKLAEAKEQLTDHHPQTNPSVGTAASDTKKKKINNGTNPETTTSG
                     GCHSPEDEQKASHQHQEALRRELEAQVHTIRILTCQKTELQMALYYSQHAVKQLEGEA
                     RDLISRLHDSWKFAGELEQALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEE
                     LKEKNAKLQEKLQLVESEKSEIQLNVKELKRKLERAKLLLPQQQLQAEADHLGKELQS
                     VSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQE
                     EKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRLEEMMWEKEEKIRELEEKMHEQEKI
                     REQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEKKMWRQEEKIHEQE
                     KIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQEEKMHDQE
                     EKIREQEEKMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMQEQEKM
                     RRQEEKIREQEEKIREQKEKIREQEEKIWEQEEKIREQEEMMQEQEEKMWEQEEKMCE
                     QEEKMQEQEEKMRRQEEKMWEQEVRLRQQEEKMQEHQEHLEAAI"
     exon            290..418
                     /gene="GOLGA6L1"
                     /inference="alignment:Splign:2.1.0"
     exon            419..469
                     /gene="GOLGA6L1"
                     /inference="alignment:Splign:2.1.0"
     exon            470..563
                     /gene="GOLGA6L1"
                     /inference="alignment:Splign:2.1.0"
     exon            564..670
                     /gene="GOLGA6L1"
                     /inference="alignment:Splign:2.1.0"
     exon            671..729
                     /gene="GOLGA6L1"
                     /inference="alignment:Splign:2.1.0"
     exon            730..871
                     /gene="GOLGA6L1"
                     /inference="alignment:Splign:2.1.0"
     exon            872..2074
                     /gene="GOLGA6L1"
                     /inference="alignment:Splign:2.1.0"
     exon            2075..3822
                     /gene="GOLGA6L1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attctagtgc agccctggtt acgcctcctc tggctcagtc acacagcgac gtagaggtga
       61 ctggaggtat atacttgtcc tcacctggat catgctgatg tggccccaac cccacctccc
      121 tacccatccc cacctcccta cccatcccca cctccctacc catccccacc tccctaccca
      181 tccccacctc cctacccatc cccacctccc tacccatccc cacctcccta cccatcctat
      241 gatgtccaaa gaaaccagac agagcaaatt ggccgaggcc aaggaacagt tgacagacca
      301 tcatccccag accaacccta gtgttggtac agcagcaagc gacaccaaaa agaagaaaat
      361 aaataatggc actaaccctg agacaaccac ttctggtggt tgccactcgc ctgaggatga
      421 acagaaggca agccaccaac atcaggaagc cctaaggagg gagctagagg cccaggttca
      481 taccatacga atccttacat gtcagaaaac tgagcttcag atggcactct actacagcca
      541 gcatgctgtc aagcagttgg aaggagaggc cagggatctg atcagccgcc tgcatgattc
      601 atggaagttt gcaggagagt tagagcaggc tctctctgct gtcgctacac agaagaagaa
      661 ggcggatagg tacattgagg agttaacaaa ggagagggac gccctgagtc tggaactgta
      721 caggaacacc ataactgatg aggagctgaa ggagaaaaat gccaaactac aagaaaaact
      781 tcaacttgta gaatctgaaa agtctgagat ccagctcaac gtaaaggagc taaaaaggaa
      841 actggagagg gccaagctcc tgctgccaca gcagcagctg caggcggagg ctgaccacct
      901 gggtaaggag ctgcagagtg tgtcagcaaa gctccaagcc caggtggaag agaacgagtt
      961 gtggaaccgc ctgaaccagc aacaggagga gaagatgtgg aggcaggagg agaagataca
     1021 ggagtgggag gagaagatac aggagcagga ggagaagata cgggagcagg aggagaagat
     1081 acgggagcag gaggagaaga tgcggaggca ggaggagatg atgtgggaga aggaggagaa
     1141 gatgcggagg caggaggaga tgatgtggga gaaggaggag aagatgcgga ggctggagga
     1201 gatgatgtgg gagaaggagg agaagatacg ggagctggaa gagaagatgc acgagcagga
     1261 gaagatacgg gagcaggaag agaagaggca ggaggaggag aagatacgcg agcaggagaa
     1321 gaggcaggag caggaggcga agatgtggag gcaggaggag aagatacggg agcaggaaga
     1381 gaagatacgg gagcaggaga aaaagatgtg gaggcaggag gagaagattc acgagcagga
     1441 gaagatacgg gaggaggaga agaggcagga gcaggaggag atgtggaggc aggaggagaa
     1501 gataagggag caggaggaga tatggaggca aaaggagaag atgcacgagc aggagaagat
     1561 acggaagcag gaggagaagg tgtggaggca ggaggagaag atgcacgacc aggaggagaa
     1621 gatacgggag caggaggaga agatgtggag gcaggaggag aagataaggg agcaggagga
     1681 gaagatacgg gagcaggagg agaagatacg agagcaggag gagatgatgc aggaacagga
     1741 agagaagatg ggggagcagg aagagaagat gcaagaacag gagaagatgc ggaggcagga
     1801 ggagaagata agggagcagg aggagaagat acgggagcag aaggagaaga tacgagagca
     1861 ggaggagaag atatgggagc aggaggagaa gatacgagag caggaggaga tgatgcagga
     1921 acaggaagag aagatgtggg agcaggagga gaagatgtgt gagcaggaag agaagatgca
     1981 agaacaggag gagaagatgc ggaggcagga ggagaagatg tgggagcagg aagtgaggct
     2041 gcggcagcag gaggagaaga tgcaggaaca ccaggagcac ctggaagctg ccatctaatg
     2101 agcacatgac aagaaggcaa agacaataaa catgtaaaag ccggcagcaa ggcctggaga
     2161 agagtaagcc gccatgtgac tgtttagaat atagtctgag cacaaacctg aaaaaaaaat
     2221 tttatttatt ttaaattgtg gcaaaatact ggccaggcat ggtagctcac gcctgtaatc
     2281 ctagcaattt gggaggccga ggtaaatgga tgacctgagg tcaagagttc aagaccagcc
     2341 tggccaatac aaaaattagc cgggcatggt ggcgcatgcc tgtaatccca gctacttggg
     2401 aggctgaggc aggagaatcg cttgaacctg ggaggcagag gttgcagtga gctgagatcg
     2461 tgccactgca ctcaagcctg ggtgacagag cgaaactccg tctcaaaaaa aaaagtttct
     2521 tccttacatg tatgtttcta ttagttttct tcttggtctt tctcatttag tcttgtgttg
     2581 tcttttgaca ttcatagtaa acttttatct gcctccagag agtattgact ttgagtttat
     2641 ggcacacaat tggagtaagg gcagatcgcc ttcatctact ttgggactaa gctggttcaa
     2701 agcaggtttt aggttttctg atggctggtc tatgttttat tcatttggac tcccaggggt
     2761 ggcccttcca gggtccccac caaggtccca tctccttcct gggacccaaa ttctcattag
     2821 gtcatttcag ccctgtgaga gtgccaaaca ttcagctagg ctctccagcc tcttaactac
     2881 cacttcatac tcagtttctt agcctcttag ccctctactg ttgaccaatc accaaatgtg
     2941 ggaaagcact acagactgtc aggatcacct cctaggcctg gtcactcaag tcctgactga
     3001 ggtctccaat taccttccaa caattgtttt tgattggggg cggggcacat ttttatccag
     3061 tttttctaac tgctcttgtg gggaggcgaa tctgtaacaa gctcctctgc ctttactgaa
     3121 agttgaaaac cttcatctgt cctttttttg ttgttgttga gatggagtct tgcgctgttg
     3181 cccaggctct agtgcaatgg cacgatctct gctcactgta acctctgcct cctgggttca
     3241 agcaattctc ctgcctcagc ttcccgcgta gcgtgtgcca ccatgcctgg ctaatttttt
     3301 tttatacctt taatagaggc aggatgtcac catgttttcc aggctggtct cgagctcctg
     3361 actcaggtga tctacctgcc tcagcctccc aaagtgctgg gattacaagt atgagccact
     3421 gcatccggcc catctgtctt ttaaaacatg tttttaattg gaggtataat ttctattagt
     3481 gaaatgcaca ggtctggttt acattttgat gagttttaac tcatttaaca ttactatgga
     3541 acccacctcc tttgaagata cagagtattt ctatcatcca gaaagttctc ctgtgctttc
     3601 atgctgtccc gcactccccc agcagctgat gaacatgctg aggacattgg tactggattc
     3661 tggccgcccc aaaagagccg ctttgaccag gcttacccag cactaaatcc ctgcctgctc
     3721 tctcaaaatt tccatcttta aactggttgt acctataacc ctccctcatc aagtcaatag
     3781 ataaacaaac cctgaaaaat aaacaactct tcctggccca gc
//
