LOCUS       XM_005248997            1728 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens glucosaminyl (N-acetyl) transferase 2 (I
            blood group) (GCNT2), transcript variant X9, mRNA.
ACCESSION   XM_005248997
VERSION     XM_005248997.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000006.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_005248997.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1728
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
     gene            1..1728
                     /gene="GCNT2"
                     /gene_synonym="bA360O19.2; bA421M1.1; CCAT; CTRCT13;
                     GCNT2C; GCNT5; IGNT; II; NACGT1; NAGCT1; ULG3"
                     /note="glucosaminyl (N-acetyl) transferase 2 (I blood
                     group); Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 5 ESTs, 5 long SRA reads, 13
                     Proteins, and 93% coverage of the annotated genomic
                     feature by RNAseq alignments, including 5 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:2651"
                     /db_xref="HGNC:HGNC:4204"
                     /db_xref="MIM:600429"
     CDS             591..1682
                     /gene="GCNT2"
                     /gene_synonym="bA360O19.2; bA421M1.1; CCAT; CTRCT13;
                     GCNT2C; GCNT5; IGNT; II; NACGT1; NAGCT1; ULG3"
                     /codon_start=1
                     /product="N-acetyllactosaminide
                     beta-1,6-N-acetylglucosaminyl-transferase isoform X2"
                     /protein_id="XP_005249054.1"
                     /db_xref="GeneID:2651"
                     /db_xref="HGNC:HGNC:4204"
                     /db_xref="MIM:600429"
                     /translation="MPLSMRYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRL
                     TQVCTSFINGKTRFLWKNKLMIHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIH
                     HHFDTFARLFRAIYMPQNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYG
                     GISRLQADLNCIRDLSAFEVSWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVL
                     PPAHAIGRTKYVHQEHLGKELSYVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVL
                     HDPRAVDLLQWSKDTFSPDEHFWVTLNRIPVFGRYKGWDVLDMDLWQQLDCQIVSLGT
                     SQLLFPRMRHSESEKSCCAERQIVTYAVP"
     polyA_site      1728
                     /gene="GCNT2"
                     /gene_synonym="bA360O19.2; bA421M1.1; CCAT; CTRCT13;
                     GCNT2C; GCNT5; IGNT; II; NACGT1; NAGCT1; ULG3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cacgttggaa aacagaagct attttctatc ccgtgggttg cgctggaaga gctgagaggc
       61 caggctgtgg atccttgcca cgaacaacaa gagagggcaa gtccagccgc ctgctagggg
      121 actagcagga agcggcacgc ctgccagagc tcatcacttc aactctggct ttcactgcgc
      181 tcattccctg aatggcagta accagggggc gggggtggca tgggaaatga aagaaagaga
      241 tatgggaaac taaatctgcc gggggaaaga gagttaccgg agttttagca aaacagctag
      301 cagatgcaaa cggggaggca gagggaggag ggaaggctgg gcttcagcaa cctgccacgg
      361 ggatttaaac aaaggaggtt tgagagaggc gggatctggc tgtaatatcg gcacagggac
      421 agagacagca gctggactct cgggatgaaa cggaatcgat tcccagcgtc tccaacaggg
      481 caggagtgag tggagtatgt tgcaaaataa gaactcagag aaacgagtga gtttggaaaa
      541 aagacttaca gattttgacg gtctcttgac atttcaccct tctttgaggc atgcctttat
      601 caatgcgtta cctcttcata atttctgtct ctagtgtaat tatttttatc gtcttctctg
      661 tgttcaattt tgggggagat ccaagcttcc aaaggctaaa tatctcagac cctttgaggc
      721 tgactcaagt ttgcacatct tttatcaatg gaaaaacacg tttcctgtgg aaaaacaaac
      781 taatgatcca tgagaagtct tcttgcaagg aatacttgac ccagagccac tacatcacag
      841 cccctttatc taaggaagaa gctgactttc ccttggcata tataatggtc atccatcatc
      901 actttgacac ctttgcaagg ctcttcaggg ctatttacat gccccaaaat atctactgtg
      961 ttcatgtgga tgaaaaagca acaactgaat ttaaagatgc ggtagagcaa ctattaagct
     1021 gcttcccaaa cgcttttctg gcttccaaga tggaacccgt tgtctatgga gggatctcca
     1081 ggctccaggc tgacctgaac tgcatcagag atctttctgc cttcgaggtc tcatggaagt
     1141 acgttatcaa cacctgtggg caagacttcc ccctgaaaac caacaaggaa atagttcagt
     1201 atctgaaagg atttaaaggt aaaaatatca ccccaggggt gctgccccca gctcatgcaa
     1261 ttggacggac taaatatgtc caccaagagc acctgggcaa agagctttcc tatgtgataa
     1321 gaacaacagc gttgaaaccg cctccccccc ataatctcac aatttacttt ggctctgcct
     1381 atgtggctct atcaagagag tttgccaact ttgttctgca tgacccacgg gctgttgatt
     1441 tgctccagtg gtccaaggac actttcagtc ctgatgagca tttctgggtg acactcaata
     1501 ggattccagt gttcggaaga tataaaggat gggatgttct agatatggat ctctggcagc
     1561 agctggattg tcaaatagtg tctcttggaa cttctcaact tctttttcct cggatgcgac
     1621 attcggaatc agagaaaagt tgttgtgcag aaagacaaat agttacctac gctgttcctt
     1681 gaaacttaac agaatatagt caaagataaa gttttcattt gtgggttt
//
