LOCUS       XM_047445613            4277 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens GC-rich sequence DNA-binding factor 2
            (GCFC2), transcript variant X2, mRNA.
ACCESSION   XM_047445613
VERSION     XM_047445613.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000002.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4277
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
     gene            1..4277
                     /gene="GCFC2"
                     /gene_synonym="C2orf3; DNABF; GCF; TCF9"
                     /note="GC-rich sequence DNA-binding factor 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 ESTs, 422 long SRA reads, 1 Protein, and 95%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 56 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:6936"
                     /db_xref="HGNC:HGNC:1317"
                     /db_xref="MIM:189901"
     CDS             61..2316
                     /gene="GCFC2"
                     /gene_synonym="C2orf3; DNABF; GCF; TCF9"
                     /codon_start=1
                     /product="intron Large complex component GCFC2 isoform X2"
                     /protein_id="XP_047301569.1"
                     /db_xref="GeneID:6936"
                     /db_xref="HGNC:HGNC:1317"
                     /db_xref="MIM:189901"
                     /translation="MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEE
                     PPSGGGRAQVAGLPHRVRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDK
                     IHHSSESKDDQGLSSDSSSSLGEKELSSTVSSSLFPSVKIPDAAFIQAARRKRELARA
                     QDDYISLDVQHTSSISVSRNEETSEESQEDEKQDTWEQQQMRKAVKIIEERDIDLSCG
                     NGSSKVKKFDTSISFPPVNLEIIKKQLNTRLTLLQETHRSHLREYEKYVQDVKSSKST
                     IQNLESSSNQALNCKFYKSMKIYVENLIDCLNEKIINIQEIESSMHALLLKQAMTFMK
                     RRQDELKHESTYLQQLSRKDETSTSGNFSVDEKTQWILEEIESRRTKRRQARVLSGNC
                     NHQEGTSSDDELPSAEMIDFQKSQGDILQKQKKVFEEVQDDFCNIQNILLKFQQWREK
                     FPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGLKEMPWFKSVEEFMDSSVED
                     SKKESSSDKKVLSAIINKTIIPRLTDFVEFLWDPLSTSQTTSLITHCRVILEEHSTCE
                     NEVSKSRQDLLKSIVSRMKKAVEDDVFIPLYPKSAVENKTSPHSKFQERQFWSGLKLF
                     RNILLWNGLLTDDTLQELGLGKLLNRYLIIALLNATPGPDVVKKCNQVAACLPEKWFE
                     NSAMRTSIPQLENFIQFLLQSAHKLSRSEFRDEVEEIILILVKIKALNQAESFIGEHH
                     LDHLKSLIKED"
ORIGIN      
        1 actgaagctg cggcttgcgg ttcagcgggt tctagggcgc cgggcgctcg ggcctcggcc
       61 atggctcaca ggccgaaaag gacttttcgg cagcgcgcgg ctgattccag cgacagcgat
      121 ggcgccgagg agtcgcctgc tgagcctggg gcgccgaggg aacttccggt cccgggttct
      181 gcggaggaag agccgccctc tggaggaggc cgcgcgcagg tggcgggact gccccaccgg
      241 gttcggggcc ctcgtggccg gggccgggtc tgggcgagct cccggcgtgc caccaaagcg
      301 gctccccgcg cggacgaagg ctcagaatcc agaacccttg atgtgtccac agatgaagag
      361 gataaaatac atcactcctc agaaagtaag gatgatcagg gtttgtcttc tgacagttct
      421 agctctcttg gagaaaaaga actttcatca acagtgtcct cgtctttgtt tccttcagtt
      481 aagatcccag atgcagcttt tattcaggca gcccgcagaa aacgtgaatt ggccagggcc
      541 caagatgact atatttcttt ggatgtacaa catacctcct ccatctctgt aagcagaaat
      601 gaagaaacaa gtgaagaaag tcaggaagat gaaaagcaag atacttggga acaacagcaa
      661 atgaggaaag cagttaaaat catagaggaa agagacatag atctttcctg tggcaatgga
      721 tcttcaaaag tgaagaaatt tgatacttcc atttcatttc cgccagtaaa tttagaaatt
      781 ataaagaagc aattaaatac tagattaaca ttactacagg aaactcaccg ctcacacctg
      841 agggagtatg aaaaatacgt acaagatgtc aaaagctcaa agagtaccat ccagaaccta
      901 gagagttcat caaatcaagc tctaaattgt aaattctata aaagcatgaa aatttatgtg
      961 gaaaatttaa ttgactgcct taatgaaaag attatcaaca tccaagaaat agaatcatcc
     1021 atgcatgcac tccttttaaa acaagctatg acctttatga aacgcaggca agatgaatta
     1081 aaacatgaat caacgtattt acaacagtta tcacgcaaag atgagacatc cacaagtgga
     1141 aacttctcag tagatgaaaa aactcagtgg attttagaag agattgaatc tcgaaggaca
     1201 aaaagaagac aagcaagggt gctttctggg aattgtaacc atcaggaagg aacatctagt
     1261 gatgatgaac tgccttcagc agagatgatt gacttccaaa aaagccaagg tgacatttta
     1321 cagaaacaga agaaagtttt tgaagaagtg caagatgatt tttgtaacat ccagaatatt
     1381 ttgttgaaat ttcagcaatg gcgagaaaag tttcctgact cctattatga agctttcatt
     1441 agtttatgca taccaaagct tttaaatccc ctaatacgag ttcagttgat tgattggaat
     1501 cctcttaagt tggaatccac aggtttaaaa gagatgccat ggttcaaatc tgtagaagaa
     1561 tttatggata gcagtgtgga agattcaaag aaggaaagta gttcagataa aaaagtcttg
     1621 tctgcaatca tcaacaaaac aattattccc cgacttacag actttgtaga attcctttgg
     1681 gatcctttgt caacctcaca gacaacaagt ttaataacac attgcagagt gattcttgaa
     1741 gaacattcca cttgtgaaaa tgaagttagt aaaagcagac aggatttact taaatccatt
     1801 gtttcaagaa tgaaaaaggc agtagaagat gatgttttta ttcctctgta tccaaagagt
     1861 gctgtagaaa acaaaacatc acctcattca aagttccaag aaagacagtt ctggtcaggc
     1921 ctaaagctct tccgcaatat tcttctttgg aatggactcc ttacagatga caccttgcaa
     1981 gaactaggac tagggaagct gctaaatcgt taccttatta tagcacttct caatgccaca
     2041 cctgggccag atgtggttaa aaagtgcaac caggtagcag catgtctacc agaaaaatgg
     2101 tttgaaaatt ctgccatgag gacatctatt ccacagctag aaaacttcat tcagttttta
     2161 ttgcagtctg cacataaatt atctagaagt gaattcaggg atgaagtcga agaaataatt
     2221 cttattttgg tgaaaataaa agctttgaat caagcagaat ccttcatagg agagcatcac
     2281 ctagaccatc ttaaatcact aattaaagaa gattgaataa actttattgg aaaatgctaa
     2341 aattttaata tagttacact cagttccttt gtttgagaag aagctggtgc ctctctcttc
     2401 tttattccct gtaatagaag gtaggatttg aaaaaaagca ggactccacc tctgtattcc
     2461 cccgtgcttt accttctggc atcatgaaaa gctgccatga ttctgtggtg ttctaaggaa
     2521 ttaaatgcac tggagcttta agagctcaac gtgtttccct ttgattcttt tggctggtct
     2581 ttcaattttc ttaagagggg aactggagaa accttgctaa aggttttagc ttaagtgagc
     2641 atgctactaa gtcttctgtc ctgaaccaca ataatatctt ttagttctct ttaactacct
     2701 ttatttaaaa ataagtcaat atgaaaatct cagttggagt gaattatttg ctaagtatta
     2761 aatgattaag gcatgtgccg attgtcaaat tatccttcag aaatctgtac caatttaatg
     2821 taccaacata agcataagtg agtgccaatg aatccctacc agcagtagtt attatccttt
     2881 ttaaaaatgc attgaaaatt tgaaaggtaa aaatcttatt ttaatagcgt attttgtgtt
     2941 ggctattaga gagtaaacat attggttttg gccatttgta attatttctg aaatatccat
     3001 ctttttctta tggactttaa gacctttata tttttaaaga tattgatttt ttgcccatgc
     3061 ttgtggcaga agttttcctt atttgccatt tttcttttat ttttttttta attgtatttt
     3121 ttgagacagg gtctggctct gtcacccagg ctggagagta gtggcacaat ctcggctcac
     3181 tgcaacctct gccttctggg ctcaagcaat cctcccactt caacctccca agtagctggg
     3241 actataggca tgcgccacca tgcccagctg atttttgtaa ttttttgtag agatggggtt
     3301 tcgtgacatt gcccaggctg gtctcgaact cttgagctca agcagtctac ccaccttgac
     3361 ctcccaaagt gctgggatta caggcttgag caaccatgtt tggcctttct tttaaatttg
     3421 ttgatgtttt ttgaagcatt aagtcattac ttattagcaa gttactattt tgtttttttg
     3481 tcattggtgg taggactaag aaggaaacag atattttaaa tactcacaac atgtgattca
     3541 ttttctgata aaatatttgt ctaataaaac agaggcaaga taatttaatc aaaagaaatt
     3601 aagaaaattt tccaaaaatg ttagtttact agtaattttt ctaagtctac ttattaaata
     3661 acttaaggga aactgtaaat atattttgca aattgttgtt caaaagataa ttggaaaaaa
     3721 ttgaatatat tgtaggattt gaatatacag cctactttta tgtcacctct accttcaaaa
     3781 ctacatataa tttattttag gagttggatt tgttatgtct gttgcagtga ggacttgtga
     3841 ttcactggta tgaagaattt tttgatgttt atattagtaa caaaattata caaggataga
     3901 atctcatcta gaaaatgcaa actattgttg aaaagcagtt agcatttcca cacaaccgct
     3961 gtccccagag ataactgctg ttttcatttt aatgttatcc ttttagacct tttctctatt
     4021 tacaaaaatg ttacgtgttt ctatgtgtac atagttttgg gttttttttt tttttttacg
     4081 taagtggcag acactttatt gcacatgaaa tttgtaattt ttttctattt aagtacacat
     4141 ttggaaatta tcctctgact tttggatttt taactaaata tgttggacgt gttcctttat
     4201 atatttaagt tcagcacaga aactttccta cctttttgtg gaagataaaa tattaaaact
     4261 gctttcaaaa ctacaaa
//
