LOCUS       XM_011530528            1731 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens galactose-3-O-sulfotransferase 1 (GAL3ST1),
            transcript variant X5, mRNA.
ACCESSION   XM_011530528
VERSION     XM_011530528.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000022.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011530528.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="22"
     gene            1..1731
                     /gene="GAL3ST1"
                     /gene_synonym="CST"
                     /note="galactose-3-O-sulfotransferase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, 116 long SRA reads, 2 Proteins, and 94%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:9514"
                     /db_xref="HGNC:HGNC:24240"
                     /db_xref="MIM:602300"
     CDS             139..1413
                     /gene="GAL3ST1"
                     /gene_synonym="CST"
                     /codon_start=1
                     /product="galactosylceramide sulfotransferase isoform X2"
                     /protein_id="XP_011528830.1"
                     /db_xref="GeneID:9514"
                     /db_xref="HGNC:HGNC:24240"
                     /db_xref="MIM:602300"
                     /translation="MLPPQKKPWESMAKGLVLGALFTSFLLLVYSYAVPPLHAGLAST
                     RTPEAAASCSPPALEPEAVIRANGSAGECQPRRNIVFLKTHKTASSTLLNILFRFGQK
                     HRLKFAFPNGRNDFDYPTFFARSLVQDYRPGACFNIICNHMRFHYDEVRGLVPTNAIF
                     ITVLRDPARLFESSFHYFGPVVPLTWKLSAGDKLTEFLQDPDRYYDPNGFNAHYLRNL
                     LFFDLGYDNSLDPSSPQVQEHILEVERRFHLVLLQEYFDESLVLLKDLLCWELEDVLY
                     FKLNARRDSPVPRLSGELYGRATAWNMLDSHLYRHFNASFWRKVEAFGRERMAREVAA
                     LRHANERMRTICIDGGHAVDAAAIQDEAMQPWQPLGTKSILGYNLKKSIGQRHAQLCR
                     RMLTPEIQYLMDLGANLWVTKLWKFIRDFLRW"
ORIGIN      
        1 ggtctcactg tgtcatccag agctggagtg cagcggcaca gtcatggctc actggaactc
       61 aggctcaagc aatcctcccg cctcagcctt ccaagtaact aggactacag gcatgtgcca
      121 ccacgcctgg tgtctgagat gctgccaccg cagaagaagc cctgggagtc catggctaag
      181 gggctggtgc tgggcgcgct cttcactagt ttcctgctgc tggtgtactc ctatgccgtg
      241 cccccgctgc atgccggcct ggcctccacc aggaccccgg aggccgcagc gtcctgctct
      301 ccacctgcac tcgagccaga ggcagtgatc cgggccaacg gctcggcggg ggagtgccag
      361 ccgcggcgca acatcgtgtt cttgaagacg cacaagacgg ccagcagcac cctgctcaac
      421 atcctgttcc gcttcggcca gaagcaccgg ctcaagttcg ccttccctaa cggccgcaat
      481 gacttcgact acccgacctt cttcgcccgc agcctggtgc aggactatcg gcccggggcc
      541 tgcttcaaca tcatctgcaa ccacatgcgc ttccactacg acgaggtgcg cggcctggtg
      601 ccgaccaacg ccatcttcat cacggtgctc cgcgaccccg cccgcttgtt cgagtcctcc
      661 ttccactact tcgggccggt ggtgcccctc acgtggaagc tctcggccgg cgacaagctg
      721 accgagttcc tgcaagaccc ggatcgctac tacgacccca acggcttcaa tgcccactac
      781 ctccgaaacc tgctcttctt cgacctgggc tatgacaaca gcctggaccc cagcagcccg
      841 caggtgcagg agcacatcct ggaggtggag cgtcgcttcc acctggtgct ccttcaagag
      901 tacttcgacg agtcgctggt gctgctgaag gacctgctgt gctgggagct ggaggacgtg
      961 ctctacttca agctcaacgc ccgccgcgac tcgcccgtgc cgcggctctc gggggagctg
     1021 tatgggcgcg ccaccgcctg gaacatgctg gactcccacc tctaccgcca cttcaacgcc
     1081 agcttctggc gcaaggtgga ggccttcggg cgggagcgca tggcccgcga ggtggccgcc
     1141 ctgcgccatg ccaacgagcg catgcggacc atctgcatcg acgggggcca cgccgtggac
     1201 gccgccgcca tccaggacga ggccatgcag ccctggcagc cgctgggcac caagtccatc
     1261 ctgggctaca acctcaagaa gagcatcggg cagcggcacg cgcagctctg ccggcgcatg
     1321 ctcacgcccg agatccagta cctgatggac ctcggcgcca acctgtgggt caccaagctc
     1381 tggaagttca ttcgcgattt cctgcggtgg tgacgtccca ccgcccagcg gcttgcctgc
     1441 ctgctcgctc cctgcagagg ggctgagcag gacgccgctg gtgctggccg cccccagccc
     1501 cctcctggtg ccacctcaga ccccggggtg agggggggct ccctgggggg aggcagccag
     1561 ccaagactgg gcccatgaac acagagaggg cctaaccgag atcagtattt aactaattat
     1621 accagttttt attaaacccc tttccctccc cgataaagaa tgttctattt ctgcctcccc
     1681 ttaaagggga gacctcagaa gtaaaggaat ttgatgttgt gtttttgtta a
//
