LOCUS       XM_047444113            4523 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens forkhead box N2 (FOXN2), transcript variant
            X11, mRNA.
ACCESSION   XM_047444113
VERSION     XM_047444113.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000002.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4523
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
     gene            1..4523
                     /gene="FOXN2"
                     /gene_synonym="HTLF"
                     /note="forkhead box N2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 EST, 154 long SRA
                     reads, 4 Proteins, and 92% coverage of the annotated
                     genomic feature by RNAseq alignments, including 11 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:3344"
                     /db_xref="HGNC:HGNC:5281"
                     /db_xref="MIM:143089"
     CDS             148..954
                     /gene="FOXN2"
                     /gene_synonym="HTLF"
                     /codon_start=1
                     /product="forkhead box protein N2 isoform X2"
                     /protein_id="XP_047300069.1"
                     /db_xref="GeneID:3344"
                     /db_xref="HGNC:HGNC:5281"
                     /db_xref="MIM:143089"
                     /translation="MGPVIGMTPDKRAETPGAEKIAGLSQIYKMGSLPEAVDAARPKA
                     TLVDSESADDELTNLNWLHESTNLLTNFSLGSEGLPIVSPLYDIEGDDVPSFGPACYQ
                     NPEKKSATSKPPYSFSLLIYMAIEHSPNKCLPVKEIYSWILDHFPYFATAPTGWKNSV
                     RHNLSLNKCFQKVERSHGKVNGKGSLWCVDPEYKPNLIQALKKQPFSSASSQNGSLSP
                     HYLSSVIKQNQVRNLKEMASCHVAHTDLLNAWAQVISYLSFPNRWDYRCT"
     polyA_site      4523
                     /gene="FOXN2"
                     /gene_synonym="HTLF"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actgcagctg ctgctgcctg ctggttgccg cgtcttcccg gaggcgactg ctggaagctg
       61 cagggaacag ctgcggtgct ctgccatatt gtgtcttccc cggccggtcc ctcgcctccc
      121 ggccgagctg acgaactgta agagtaaatg ggtccagtaa ttggaatgac tccagataag
      181 agagctgaaa ccccaggagc tgaaaagatt gcaggattaa gccagattta caaaatggga
      241 agcttgcctg aagctgttga tgctgccagg ccgaaggcca ctctagtgga cagtgagtca
      301 gcagatgatg aactcacaaa cttgaactgg cttcatgaaa gcactaatct tctaacaaac
      361 ttcagcctcg gaagtgaggg tcttccaatt gttagtccat tgtatgacat agagggagat
      421 gatgtgccat cctttggacc agcttgctac cagaacccag aaaaaaaatc agcgacttca
      481 aagcccccat actcctttag tcttctcatt tatatggcca ttgagcactc tccaaataaa
      541 tgtttgcctg tcaaagaaat ttatagctgg attctggacc attttccata ttttgctact
      601 gcaccaacag gctggaagaa ttctgttcga cataatctgt ccctgaataa atgttttcag
      661 aaagtggaaa gaagccatgg caaggttaat ggaaaaggtt ccttatggtg tgttgatccg
      721 gaatataaac ccaatcttat ccaggcactg aagaagcaac ctttttcttc agcatcttca
      781 caaaatggtt ctttatcacc tcactattta agctctgtaa tcaagcagaa ccaggtgcga
      841 aacctcaaag agatggcgtc ttgccatgtt gcccacactg atcttctgaa tgcctgggct
      901 caagtgatct cctacctcag cttcccaaat aggtgggact acaggtgcac atgactgtat
      961 tttaattcat aaaaaattca gataaaaatt tgggatattt tgttgttgct gtttaacatt
     1021 tttctatttt aacaagtatt atgtatttat tataggaaat ttgggcaata aaaacattta
     1081 ttaaagagaa agtaaagtca tttatcccat tgttaatatt ttatttttat ttatttattt
     1141 atttatttga gacaggttct cactctgtca cccaggccag agggcaatgg cacagtcatg
     1201 actcaccata gcctcacaat cctgggctta agccatcttc ccaccttagc ctcccaagta
     1261 gctaggacta caggtgccat tacacctggc taattttgtt gttaacattt tgatataatt
     1321 cctttggggt ttttttaatg ccacatatgt gaatagatac acttgcatgc gtgtatgtac
     1381 agggacacat acataaacac acacatactt tttctccaga tactagattc acactgtgta
     1441 tacagtttta tatccctttt ccatttattt ttatgggtat ttttcattga aaataggatt
     1501 gaatttttta gtaatatcag tagagttatt accttttcag gtctatctta gactagaaaa
     1561 ggggttggca aactatggcc catggccatt tctggcctga catctgtttt tgggtgtccc
     1621 atgagctaag gatggtttta catttgtaaa atggttggag aaaacaaaat caaataacaa
     1681 taaaatttca agactgtgaa aattcattgc aacagagacc tacatattat atcctgggtt
     1741 ttgcctctta gcatgcaaag cctaaaatat ttaccttctg accctttact gaagaagttt
     1801 gtcatccctc aaattagaat atgcttgaag atatttctcc tgtaggttat ttaatctgaa
     1861 gaactttaat tttaaaagat aataagttga ctttttaaaa gtatatcaaa attctgaatt
     1921 agtgggtttt tttcttgtag attagtagta tattaaaatc agttttccta gcgttgcttt
     1981 ggagcctgga gacattttca taacctttaa aaatagaaaa tttcagatga aaacctttct
     2041 gtgtatcaga aatattttgg ctctttggaa ctatactaaa ctgagcctca gaagcagtgt
     2101 gctgatatct ttaaaaataa aggaggaaaa gaatatgaaa aagttctaga gaaccctgca
     2161 aagaagttaa atggataggg gatctgtttc aaataatgtt ctgccttaac ataagacaaa
     2221 tatccgtgtt cctgttacct acatcagtca aatgtggttt ctctttacat ttaggtattg
     2281 ccaaaatgcc tttatctttg tattgcctca ataaagtctg acacttattc tctaaagctc
     2341 agttcgtata catatcttga gaacattttc tttgtgaatt ctggagttta cttaaatctt
     2401 ttcttgctct tgttctgttc tatccaaatt ctttctttct ttggggaaca gacatttcca
     2461 caagtttttg ctgctagttt cacctgcatg tttttcattt actagggcac aggtacttct
     2521 tcttcatcta atgacttgta cgtattatgc atcatctgtc tagtgctacc agcaccttac
     2581 ctccattcct atatgcatga gtcttaggcc tgttcctcta gtaataatta acttagtggg
     2641 gaggtcgttg gcattctagg ttaaaacaaa tgcacatctg tcctggaata taatacaaaa
     2701 ttctccatga attttaaggg aagaaaacat aaaacctcac aaaaatttag ggaattttat
     2761 ttttgaactt ggttgttttg gggtatattt ctgaggaaat tttctcttgc ctctttatat
     2821 tatttctaga gagaagttta aaaaacacca agtggattag acattcatta caactaatac
     2881 tgttgagcca gactccttgt gccagacact gttggaggtt ccttgggata tgcatagatg
     2941 agagacccag gccctgctct tagaaaatat atactttggc tgggcacagt ggctcacgcc
     3001 tataatccca gcactttggg aggccgaggt aggtggatca catgagatca agagttcaag
     3061 accagcctgg ccaacatggt gaaaccccat ctctactaaa aatacaaaaa ttagctgggt
     3121 gtgtgttggc acacgcctgt aattccagct actcaggagg ctgaggcagg agaatcactt
     3181 gaacttggga ggtggagatt gcagtgagcc gagatcgcgc cactgcactc cagcctaggt
     3241 gacagagtga gactccaaaa aaaaaaaaaa aaaatgatgg agaacacctg attatcaacg
     3301 atttgtccaa ggtacaacct caaactttgt ggaacaaaag ttctccctgg cagagagaat
     3361 cataacaata gagagagttg tctggcagtt gctaggaatc tgtctggcat gttgatatag
     3421 accaggtaga tgtggtcatt tgcgtgggca aggcaaatgt agcagaagtt taagagctta
     3481 tttagcataa taaggacttt gaacatcctc ctctgcctag aacaattaat aagccttaag
     3541 ttgcttactt gatgctttgc atgcattatc taatttaatc cttaaaacaa ccctctgagg
     3601 tattgctgcc cctcttttac agataagcaa actgaagttt ggggagatta agtaacttct
     3661 caaggtcaca caactagtaa gtggcaaaga aggattcaga ttgaataatt ctaatttcaa
     3721 agcctgactc ctactagata agtggcactg ggagacctgc tgaagaactt taaatagtga
     3781 agtgacatcg tcagttttat gttttataaa gatcacttag gtattatcat tggcctccaa
     3841 tattaaaact tacatattca tctaacactt catagaatca tctttactga tcattatatt
     3901 agagctacct ttagacacgg aaaactaaag ggagagatta ggcttagaac tccagaaact
     3961 gttatcagcc taaacaggtg cagcagtgtg tttgttgtct cttgatcaac ttacaatgac
     4021 ttttatgtga cagtatcaat gttatggcat tgtataatag atagcaggag acacaggatt
     4081 cttacactga gatagcagaa cgaaattttt tttggtcaat agtttggttt ggtgtgtatt
     4141 tagagtaaat tcacctgttt aaaaatatta ctgagctgtt ctagacacca aggtacatca
     4201 gtgaaaaaag cagacaaaaa tggaactcac attccagtta gtaaatttta gtagttatac
     4261 taactgctaa aagcacctgg tatactacaa acagatataa aattaaggta gttgatggtg
     4321 atgttagggc tacatgtaaa gctaagattt gtgtcttact gaaatgaaac taaaccagtg
     4381 gtccagacag cttaaagtgt tggtaattta ttgaaactat tcttctactt cagagaatta
     4441 caagagacag cttctccatc tggatgctct gcaaatgtat atattagttt tgatagagac
     4501 aataaatcct tttgtaatta cta
//
