LOCUS       XM_047444112            4665 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens forkhead box N2 (FOXN2), transcript variant
            X10, mRNA.
ACCESSION   XM_047444112
VERSION     XM_047444112.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000002.12) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4665
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
     gene            1..4665
                     /gene="FOXN2"
                     /gene_synonym="HTLF"
                     /note="forkhead box N2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 EST, 115 long SRA
                     reads, 4 Proteins, and 92% coverage of the annotated
                     genomic feature by RNAseq alignments, including 10 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:3344"
                     /db_xref="HGNC:HGNC:5281"
                     /db_xref="MIM:143089"
     CDS             290..1096
                     /gene="FOXN2"
                     /gene_synonym="HTLF"
                     /codon_start=1
                     /product="forkhead box protein N2 isoform X2"
                     /protein_id="XP_047300068.1"
                     /db_xref="GeneID:3344"
                     /db_xref="HGNC:HGNC:5281"
                     /db_xref="MIM:143089"
                     /translation="MGPVIGMTPDKRAETPGAEKIAGLSQIYKMGSLPEAVDAARPKA
                     TLVDSESADDELTNLNWLHESTNLLTNFSLGSEGLPIVSPLYDIEGDDVPSFGPACYQ
                     NPEKKSATSKPPYSFSLLIYMAIEHSPNKCLPVKEIYSWILDHFPYFATAPTGWKNSV
                     RHNLSLNKCFQKVERSHGKVNGKGSLWCVDPEYKPNLIQALKKQPFSSASSQNGSLSP
                     HYLSSVIKQNQVRNLKEMASCHVAHTDLLNAWAQVISYLSFPNRWDYRCT"
     polyA_site      4665
                     /gene="FOXN2"
                     /gene_synonym="HTLF"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actgcagctg ctgctgcctg ctggttgccg cgtcttcccg gaggcgactg ctggaagctg
       61 cagggaacag ctgcggtgct ctgccatatt gtgtcttccc cggccggtcc ctcgcctccc
      121 ggccgagctg acgttggttg aagccatgga taacagaacc cacagatgca gagggctgac
      181 tgtacaagtc tgtcaaaaaa ccaaactgct ggttggctaa taattggtca ctgtatgact
      241 tatagtacag gtgatattac ttctgattct agatgaactg taagagtaaa tgggtccagt
      301 aattggaatg actccagata agagagctga aaccccagga gctgaaaaga ttgcaggatt
      361 aagccagatt tacaaaatgg gaagcttgcc tgaagctgtt gatgctgcca ggccgaaggc
      421 cactctagtg gacagtgagt cagcagatga tgaactcaca aacttgaact ggcttcatga
      481 aagcactaat cttctaacaa acttcagcct cggaagtgag ggtcttccaa ttgttagtcc
      541 attgtatgac atagagggag atgatgtgcc atcctttgga ccagcttgct accagaaccc
      601 agaaaaaaaa tcagcgactt caaagccccc atactccttt agtcttctca tttatatggc
      661 cattgagcac tctccaaata aatgtttgcc tgtcaaagaa atttatagct ggattctgga
      721 ccattttcca tattttgcta ctgcaccaac aggctggaag aattctgttc gacataatct
      781 gtccctgaat aaatgttttc agaaagtgga aagaagccat ggcaaggtta atggaaaagg
      841 ttccttatgg tgtgttgatc cggaatataa acccaatctt atccaggcac tgaagaagca
      901 acctttttct tcagcatctt cacaaaatgg ttctttatca cctcactatt taagctctgt
      961 aatcaagcag aaccaggtgc gaaacctcaa agagatggcg tcttgccatg ttgcccacac
     1021 tgatcttctg aatgcctggg ctcaagtgat ctcctacctc agcttcccaa ataggtggga
     1081 ctacaggtgc acatgactgt attttaattc ataaaaaatt cagataaaaa tttgggatat
     1141 tttgttgttg ctgtttaaca tttttctatt ttaacaagta ttatgtattt attataggaa
     1201 atttgggcaa taaaaacatt tattaaagag aaagtaaagt catttatccc attgttaata
     1261 ttttattttt atttatttat ttatttattt gagacaggtt ctcactctgt cacccaggcc
     1321 agagggcaat ggcacagtca tgactcacca tagcctcaca atcctgggct taagccatct
     1381 tcccacctta gcctcccaag tagctaggac tacaggtgcc attacacctg gctaattttg
     1441 ttgttaacat tttgatataa ttcctttggg gtttttttaa tgccacatat gtgaatagat
     1501 acacttgcat gcgtgtatgt acagggacac atacataaac acacacatac tttttctcca
     1561 gatactagat tcacactgtg tatacagttt tatatccctt ttccatttat ttttatgggt
     1621 atttttcatt gaaaatagga ttgaattttt tagtaatatc agtagagtta ttaccttttc
     1681 aggtctatct tagactagaa aaggggttgg caaactatgg cccatggcca tttctggcct
     1741 gacatctgtt tttgggtgtc ccatgagcta aggatggttt tacatttgta aaatggttgg
     1801 agaaaacaaa atcaaataac aataaaattt caagactgtg aaaattcatt gcaacagaga
     1861 cctacatatt atatcctggg ttttgcctct tagcatgcaa agcctaaaat atttaccttc
     1921 tgacccttta ctgaagaagt ttgtcatccc tcaaattaga atatgcttga agatatttct
     1981 cctgtaggtt atttaatctg aagaacttta attttaaaag ataataagtt gactttttaa
     2041 aagtatatca aaattctgaa ttagtgggtt tttttcttgt agattagtag tatattaaaa
     2101 tcagttttcc tagcgttgct ttggagcctg gagacatttt cataaccttt aaaaatagaa
     2161 aatttcagat gaaaaccttt ctgtgtatca gaaatatttt ggctctttgg aactatacta
     2221 aactgagcct cagaagcagt gtgctgatat ctttaaaaat aaaggaggaa aagaatatga
     2281 aaaagttcta gagaaccctg caaagaagtt aaatggatag gggatctgtt tcaaataatg
     2341 ttctgcctta acataagaca aatatccgtg ttcctgttac ctacatcagt caaatgtggt
     2401 ttctctttac atttaggtat tgccaaaatg cctttatctt tgtattgcct caataaagtc
     2461 tgacacttat tctctaaagc tcagttcgta tacatatctt gagaacattt tctttgtgaa
     2521 ttctggagtt tacttaaatc ttttcttgct cttgttctgt tctatccaaa ttctttcttt
     2581 ctttggggaa cagacatttc cacaagtttt tgctgctagt ttcacctgca tgtttttcat
     2641 ttactagggc acaggtactt cttcttcatc taatgacttg tacgtattat gcatcatctg
     2701 tctagtgcta ccagcacctt acctccattc ctatatgcat gagtcttagg cctgttcctc
     2761 tagtaataat taacttagtg gggaggtcgt tggcattcta ggttaaaaca aatgcacatc
     2821 tgtcctggaa tataatacaa aattctccat gaattttaag ggaagaaaac ataaaacctc
     2881 acaaaaattt agggaatttt atttttgaac ttggttgttt tggggtatat ttctgaggaa
     2941 attttctctt gcctctttat attatttcta gagagaagtt taaaaaacac caagtggatt
     3001 agacattcat tacaactaat actgttgagc cagactcctt gtgccagaca ctgttggagg
     3061 ttccttggga tatgcataga tgagagaccc aggccctgct cttagaaaat atatactttg
     3121 gctgggcaca gtggctcacg cctataatcc cagcactttg ggaggccgag gtaggtggat
     3181 cacatgagat caagagttca agaccagcct ggccaacatg gtgaaacccc atctctacta
     3241 aaaatacaaa aattagctgg gtgtgtgttg gcacacgcct gtaattccag ctactcagga
     3301 ggctgaggca ggagaatcac ttgaacttgg gaggtggaga ttgcagtgag ccgagatcgc
     3361 gccactgcac tccagcctag gtgacagagt gagactccaa aaaaaaaaaa aaaaaatgat
     3421 ggagaacacc tgattatcaa cgatttgtcc aaggtacaac ctcaaacttt gtggaacaaa
     3481 agttctccct ggcagagaga atcataacaa tagagagagt tgtctggcag ttgctaggaa
     3541 tctgtctggc atgttgatat agaccaggta gatgtggtca tttgcgtggg caaggcaaat
     3601 gtagcagaag tttaagagct tatttagcat aataaggact ttgaacatcc tcctctgcct
     3661 agaacaatta ataagcctta agttgcttac ttgatgcttt gcatgcatta tctaatttaa
     3721 tccttaaaac aaccctctga ggtattgctg cccctctttt acagataagc aaactgaagt
     3781 ttggggagat taagtaactt ctcaaggtca cacaactagt aagtggcaaa gaaggattca
     3841 gattgaataa ttctaatttc aaagcctgac tcctactaga taagtggcac tgggagacct
     3901 gctgaagaac tttaaatagt gaagtgacat cgtcagtttt atgttttata aagatcactt
     3961 aggtattatc attggcctcc aatattaaaa cttacatatt catctaacac ttcatagaat
     4021 catctttact gatcattata ttagagctac ctttagacac ggaaaactaa agggagagat
     4081 taggcttaga actccagaaa ctgttatcag cctaaacagg tgcagcagtg tgtttgttgt
     4141 ctcttgatca acttacaatg acttttatgt gacagtatca atgttatggc attgtataat
     4201 agatagcagg agacacagga ttcttacact gagatagcag aacgaaattt tttttggtca
     4261 atagtttggt ttggtgtgta tttagagtaa attcacctgt ttaaaaatat tactgagctg
     4321 ttctagacac caaggtacat cagtgaaaaa agcagacaaa aatggaactc acattccagt
     4381 tagtaaattt tagtagttat actaactgct aaaagcacct ggtatactac aaacagatat
     4441 aaaattaagg tagttgatgg tgatgttagg gctacatgta aagctaagat ttgtgtctta
     4501 ctgaaatgaa actaaaccag tggtccagac agcttaaagt gttggtaatt tattgaaact
     4561 attcttctac ttcagagaat tacaagagac agcttctcca tctggatgct ctgcaaatgt
     4621 atatattagt tttgatagag acaataaatc cttttgtaat tacta
//
