LOCUS       XM_047444110            6893 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens forkhead box N2 (FOXN2), transcript variant
            X8, mRNA.
ACCESSION   XM_047444110
VERSION     XM_047444110.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000002.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 31% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..6893
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
     gene            1..6893
                     /gene="FOXN2"
                     /gene_synonym="HTLF"
                     /note="forkhead box N2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 5 ESTs, 1197
                     long SRA reads, 7 Proteins, and 94% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     1 sample with support for all annotated introns"
                     /db_xref="GeneID:3344"
                     /db_xref="HGNC:HGNC:5281"
                     /db_xref="MIM:143089"
     CDS             1746..3041
                     /gene="FOXN2"
                     /gene_synonym="HTLF"
                     /codon_start=1
                     /product="forkhead box protein N2 isoform X1"
                     /protein_id="XP_047300066.1"
                     /db_xref="GeneID:3344"
                     /db_xref="HGNC:HGNC:5281"
                     /db_xref="MIM:143089"
                     /translation="MGPVIGMTPDKRAETPGAEKIAGLSQIYKMGSLPEAVDAARPKA
                     TLVDSESADDELTNLNWLHESTNLLTNFSLGSEGLPIVSPLYDIEGDDVPSFGPACYQ
                     NPEKKSATSKPPYSFSLLIYMAIEHSPNKCLPVKEIYSWILDHFPYFATAPTGWKNSV
                     RHNLSLNKCFQKVERSHGKVNGKGSLWCVDPEYKPNLIQALKKQPFSSASSQNGSLSP
                     HYLSSVIKQNQVRNLKESDIDAAAAMMLLNTSIEQGILECEKPLPLKTALQKKRSYGN
                     AFHHPSAVRLQESDSLATSIDPKEDHNYSASSMAAQRCASRSSVSSLSSVDEVYEFIP
                     KNSHVGSDGSEGFHSEEDTDVDYEDDPLGDSGYASQPCAKISEKGQSGKKMRKQTCQE
                     IDEELKEAAGSLLHLAGIRTCLGSLISTAKTQNQKQRKK"
ORIGIN      
        1 actgcagctg ctgctgcctg ctggttgccg cgtcttcccg gaggcgactg ctggaagctg
       61 cagggaacag ctgcggtgct ctgccatatt gtgtcttccc cggccggtcc ctcgcctccc
      121 ggccgagctg acggtgagtc ccgggcggag cggtcccctc cagggtcggc gctccccgcc
      181 ccagcccgcg gcgcagctcc cgggcgcgga ggcagcgcga gcgacccgcg ccaggcgtgg
      241 ggcgcggagg cggctgtccc gtgacgcgcc cggacatttt tgtccagtga ggaatttgcg
      301 ccggcgcggg ggtgtccccg gcgcgcgtat cgggtggtgt gtgggctccg ggggatgtcg
      361 aactgagggg agtgtggctt gtgaggagtt aggagttttt cctgagaggt aatgaccgcc
      421 cgggaggggc tgtcgcgcgg cggaaaccgc ggcgaggggt gtcgtctctc cgggaaggcg
      481 tggagggggc cccaaggacc ctcagggctc ggctcggggc tggaatctgc tgttagggaa
      541 gtaccccaag cacctcggag cctttgcaac gccccctcct ctggcttgaa gtggagcgag
      601 acatgtcggg ctcggagtcc tcgtccggcc ccagttggga ctggctgggc cccgccaagt
      661 agtgcacggg gaggtgccgg gggcggccgg gcgttgtggt gggcagaggc gggtcccggg
      721 tgtgtgtggg agcgaccccg gcaccctctc gcccctccac cgcctcgagg gggcctcaga
      781 gggtggctgt cttgggagct actgtttcag cgctgcaata tggacacttc ctgttcgccg
      841 cctcctttgg ggccgtggtt acctttgcct tttagtcctc tttcctggca aggtgagagg
      901 tctgcggtgg aagaggcctt cagcctttca agtttgcccc actgcagcag cagcctgtgt
      961 ggaacccggc aggacggtgg tagttagcgg aaagcagccc atgtgctccg tgctccatcc
     1021 tccactactt aactccaccc ccttttgcac ctttgcaaaa tgcctctttt tccactgcat
     1081 ctctcgggag ttggggtgtc tgcttcgctg acgacccaca ctctcgcagt gttcttgcac
     1141 tggatttctg ctttaaagtc tttttacagc agtctctgaa cttcattttc tccctactgg
     1201 gaaaaaagag ttttagcgtg caaagaaatg accacagact ttctttctcc taccccaact
     1261 ccgaggtgag gggaggaggg cagttaagta tttacagttg gttgaagcca tggataacag
     1321 aacccacaga tgcagagggc tgactgtaca agtctgtcaa aaaaccaaac tgctggttgg
     1381 ctaataattg gtcactgtat gacttatagt acaggtgata ttacttctga ttctagatga
     1441 tcttttgtgg tactgctttt tgaaatccgt gtttctgtga aacggaggag gattgtgtac
     1501 tagagactca tcttgatgta tttggtcttt atgcagaaaa tatcagcagc atggtgaacc
     1561 acgtacctgg atcaaggtac caagtacctt cagctttctg ctgaaaacaa cctaaaatgc
     1621 tggataaaat aaaatcttaa atgcatcagt gctctggcgc aaaggggaga gtacttaggc
     1681 caggctgaat tctgaatctg gctattgctt tgaggatatt tgccaaatca gaactgtaag
     1741 agtaaatggg tccagtaatt ggaatgactc cagataagag agctgaaacc ccaggagctg
     1801 aaaagattgc aggattaagc cagatttaca aaatgggaag cttgcctgaa gctgttgatg
     1861 ctgccaggcc gaaggccact ctagtggaca gtgagtcagc agatgatgaa ctcacaaact
     1921 tgaactggct tcatgaaagc actaatcttc taacaaactt cagcctcgga agtgagggtc
     1981 ttccaattgt tagtccattg tatgacatag agggagatga tgtgccatcc tttggaccag
     2041 cttgctacca gaacccagaa aaaaaatcag cgacttcaaa gcccccatac tcctttagtc
     2101 ttctcattta tatggccatt gagcactctc caaataaatg tttgcctgtc aaagaaattt
     2161 atagctggat tctggaccat tttccatatt ttgctactgc accaacaggc tggaagaatt
     2221 ctgttcgaca taatctgtcc ctgaataaat gttttcagaa agtggaaaga agccatggca
     2281 aggttaatgg aaaaggttcc ttatggtgtg ttgatccgga atataaaccc aatcttatcc
     2341 aggcactgaa gaagcaacct ttttcttcag catcttcaca aaatggttct ttatcacctc
     2401 actatttaag ctctgtaatc aagcagaacc aggtgcgaaa cctcaaagaa tctgatattg
     2461 atgctgctgc tgcaatgatg cttttaaata cttctataga acaaggaatt ttagaatgtg
     2521 agaagcctct tcctcttaaa acagcattgc aaaaaaagag gagttacggc aatgcatttc
     2581 atcatcccag tgctgtacga ttacaagaga gtgattcttt agccaccagc attgatccaa
     2641 aagaagatca caattacagt gcaagtagca tggcagcaca gcgttgtgca tccaggtcta
     2701 gcgtgtcttc cctgtcttct gtggatgagg tatatgaatt tatcccaaag aatagtcacg
     2761 tgggaagtga tggcagtgaa ggatttcaca gtgaagaaga tacagacgtt gattatgaag
     2821 atgatcctct tggagacagt ggctatgcat cacagccttg tgcaaaaatc tctgaaaaag
     2881 ggcagtcagg caaaaagatg cgaaaacaga catgtcaaga aattgatgag gagctcaaag
     2941 aggcagctgg atctctgctc caccttgctg gaattcgtac atgtttaggt tccctaataa
     3001 gtactgcaaa gacacaaaat caaaagcaac ggaaaaaata gaaatactta aagtgtggca
     3061 atactctttc acttaattct ttacaaggga tatcaaagcc ataatggact tcattagttt
     3121 tagggtaggg aagggatact aattacttat ttctttcaaa acatttttgg tttttggttt
     3181 ttaaaatttt tattaaacaa ttgctgttag gatcatgcct gatcagaaat acatgatgtg
     3241 aagtcctaaa agcataattt ttgtgataaa tgtgtccaag atttgaaaat ttttatataa
     3301 gaaaatcccc agcctctgtc ttaaacttgt gggacaaaaa tcctttcttc tgttaatatg
     3361 tcagaatgta agatttggca actcgataaa tttttttcat tttcttttcc aatctgtaac
     3421 tatagttact gaaccagcta aaaattttgc tgatgtattt ttcatatact tctctcctga
     3481 cacgcaatcc ggtaacataa gattgaaatt tttttacttt gtcttaattt gtttctaatt
     3541 ttttttttgt tgtcgtgtga gcaaagacaa acataaattg aaaaacatcc tgatgtttag
     3601 aaagtttctt ttggttacgt aggtagagaa tacaacaaag agttctaaga cttagaaaag
     3661 acaattttgt ggtgtcattt catccaagaa cactcccaat tcctattaga atggtagctt
     3721 tgaagtgttt ttacttcaga gatcctgcat agcatttatt ggggcctttt attctttccc
     3781 aaagtgcttt gcaaacatta agttttagcc actagctgcc tttgttgagt ataagttatc
     3841 cagtgagagg atatagccaa ttaagtgtgt tatggagtac acccattttg acacacttgt
     3901 aataagagaa tctttcattt gcctgccatg tgtactgtat tatgagaatc ttataatcgg
     3961 aatggagtga aatgaaacat tttgagtact gatggcatgt tatcatacat aaagtaggtc
     4021 atttaggaaa aaacttctgt ccaagctttg tatgaattaa attcataagt ataccaaatt
     4081 aaatcttaat agatttaatg caattttaca gacacaatac cttcatgaat ttcaaaattc
     4141 atataaaatt tgatcttatg caatacacct ttttgaggag gcagtgtaac aacctatagt
     4201 gccattgatc catgagaaaa agattttctg gtactactcc aaaagtgctt tgactaagta
     4261 tcttaactat ttgaacagtc tgcttatatg agacagtttt tcatagtatc atttgtataa
     4321 tttgattaga ttattcagaa acaataggat gctaaactaa ttcattgtat ctttttttta
     4381 caatggtgga agcaactttc tgaaagttca gtcttatgct acatcctaag tcatagacaa
     4441 tgaccttgtt ttcattattc tgatagattg tatacatatg tacacataca tatacacata
     4501 tgcacagtca aggtcatgat gttgatttgc tttcagctgt ttctgtgatt ataaagcatt
     4561 ttttaagaga caaattttaa cttttaattt ttattttggc aaaactgtca aatgagaaaa
     4621 atgattttaa aaactttttt ttcaattgac aagactttaa gtcagggata acagtattaa
     4681 tgttctctgt tctgtttcca tgttaaattt aatttaacct ggatagccac attaatgaat
     4741 tggtgctgtc aaaatatagt aatttttaaa tttgttaata atgaaaaccc ttaagcatgc
     4801 aggatgaggt atttgggttt tttttttaga tcgatcacat ctacagaaaa tggctaaacc
     4861 aagttaactt ttattataga cagtgaataa aacaccaaaa acccaaaaat gctttaacca
     4921 cagtataaat aatagattat acacatcatc ttaataacta tttttaagtt atttaccata
     4981 gcctctgtat agaccttagg aacagtgttt cagtgatctg gcaccagttt attttgttct
     5041 gctgaaattc tgtatcacaa atgtgctacc tggtttttgt ccattagata attactcttt
     5101 ataaggaaag gaaagagaag cagagttagt tccagctcta atagggatct tcaaagttat
     5161 tttgtcttga tgtatgtaac agtaattctt tacatctttt gatttttctc ttccttttta
     5221 ttcactcttc ccacgaattt aaatgtttaa gttatattca tcactagcaa ggatgataaa
     5281 cacttgtgca ctgaaagcta acagggagag gttacacaat attttacagt ttcttaaaca
     5341 taatttaatg catcaccttc cacttgctaa cataccaagt cagttatttt caagggaaga
     5401 accttttaaa ttatggtcct ccatttacta cttccactga gagtatgctc tcattcctca
     5461 ggtgttttga gaaacatgac taataaccac acaattaagt agagtcattc caagtcctat
     5521 ggcctggaaa ttgtattccc tataatatac aaattttcct gtaataaagt caacttagaa
     5581 actccaagga ggttacatgt tttccaacat atcctaaaaa ctgtgatata agctaacata
     5641 taatttgcct tacgtcaaaa gaatatgttt tgttgcagct gattccagtt tataatagat
     5701 ccctagtaaa aagctttgat tcaacacaat tgttcatctt cacatcccaa acagaatcac
     5761 tgtttcttga atatatattt ttgaagtttt tttgtgcaat atattactaa atcagttatt
     5821 attttacttt tccaaattca gagaaagaaa acagattacc tgaattcatg gaaaaggtgg
     5881 atcacctccc tttttccacc ttcaagcctt tcctgtcctc atagccagca tgacttcttt
     5941 taacttggat tcctttgtat atagtaaagt ttagtatata tatatttttt tctttttgct
     6001 actttctgag gcattatgta aagggctcat actagatgtt cagttaaata tactttagca
     6061 caaagtcaaa ctagagaatg tgttaaggag ggaatgtata tgtcttggta gaccaggagg
     6121 cctttgccag caatttaagc aacagatgtg aatacttcac aaagctgtaa agaccattgt
     6181 cttaaatact acaacaactt aacacccttt tgtgaagatc acagcattta tctaagaaac
     6241 tgtgaggctt tctggtttac atatatctta caggtgtttt tttgtatttt tttttttttt
     6301 tagtttgaaa tgtgtaagct ttgatttaaa ccaagtttac ttcagtatgt taatgatgta
     6361 gtaaaaatat ttattgaaag gtgaattcga gtattttaat gttatacctg ccattttttt
     6421 tcttaaagca tattctttgc atctaactgc cagtgccatt gtcaaaactt attttttaaa
     6481 tcgttgtaca tttcttatta aactaagtgc ttaattttaa agtattatgt tgccatcata
     6541 tagtgtataa aaatgtataa ttgccaattg attgtaacta ttatttattt ttaaatgaaa
     6601 gtgtaagaat gctttctgat tcaacaaatt tgttatcaaa ctgtttcctt atcctctttt
     6661 ctgatgtagc ataaaaattg tcccggtttg agttataact gccagtagat gaccagtcac
     6721 aagtgaacca cttctcagtt gccaatcttt gctcatatta aaaacaactt acaaatactt
     6781 agtttttgta tctaatctct gattattaaa atgtttataa agtttatttt taccaaagag
     6841 atgcaattca ttatgagaaa gtattgcata ataaattttg ttttataact ttt
//
