LOCUS       XM_017025229            3273 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens forkhead box N1 (FOXN1), transcript variant
            X5, mRNA.
ACCESSION   XM_017025229
VERSION     XM_017025229.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000017.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_017025229.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3273
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
     gene            1..3273
                     /gene="FOXN1"
                     /gene_synonym="FKHL20; RONU; TIDAND; TLIND; WHN"
                     /note="forkhead box N1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 1 EST, 8 long SRA
                     reads, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 4 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:8456"
                     /db_xref="HGNC:HGNC:12765"
                     /db_xref="MIM:600838"
     CDS             106..1809
                     /gene="FOXN1"
                     /gene_synonym="FKHL20; RONU; TIDAND; TLIND; WHN"
                     /codon_start=1
                     /product="forkhead box protein N1 isoform X4"
                     /protein_id="XP_016880718.1"
                     /db_xref="GeneID:8456"
                     /db_xref="HGNC:HGNC:12765"
                     /db_xref="MIM:600838"
                     /translation="MVSLPPPQSDVTLPGPTRLEGERQGDLMQAPGLPGSPAPQSKHA
                     GFSCSSFVSDGPPERTPSLPPHSPRIASPGPEQVQGHCPAGPGPGPFRLSPSDKYPGF
                     GFEEAAASSPGRFLKGSHAPFHPYKRPFHEDVFPEAETTLALKGHSFKTPGPLEAFEE
                     IPVDVAEAEAFLPGFSAEAWCNGLPYPSQEHGPQVLQGSEVKVKPPVLESGAGMFCYQ
                     PPLQHMYCSSQPPFHQYSPGGGSYPIPYLGSSHYQYQRMAPQASTDGHQPLFPKPIYS
                     YSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVE
                     NKSGSSSRKGCLWALNPAKIDKMQEELQKWKRKDPIAVRKSMAKPGLAPPGPPQPLFP
                     QPDGHLELRAQPGTPQDSPLPAHTPPSHSAKLLAEPSPARTMHDTLLPDGDLGTDLDA
                     INPSLTDFDFQGNLWEQLKDDSLALDPLVLVTSSPTSSSMPPPQPPPHCFPPGPCLTE
                     TGSGAGDLAAPGSGGSGALGDLHLTTLYSAFMELEPTPPTAPAGPSVYLSPSSKPVAL
                     A"
ORIGIN      
        1 acagacacag gacggccgag ctgacggact gacagacgga cagagctcct ggccccccag
       61 acccgggccc ccacgccgac ctgcttcact gagcaggact gggtgatggt gtcgctaccc
      121 ccgccgcagt ctgacgtcac gctgccgggc cccaccagac tggagggcga gcgccaaggg
      181 gacctcatgc aggcaccggg cctcccaggc tcccctgccc cacagagtaa gcatgccggc
      241 ttcagctgct cgtcatttgt gtccgacggc cctccagaga ggacaccctc actgccccca
      301 cacagccccc gcattgcgtc accagggccc gagcaagtcc agggccactg cccagccggc
      361 cccggccctg ggcccttcag gctctcaccc tcagacaagt atcctggctt tggctttgag
      421 gaggccgcag caagcagccc tgggcgattc ctcaagggca gccacgcgcc cttccacccg
      481 tacaagcggc ctttccatga ggacgtcttc ccagaggccg agaccaccct ggccctcaaa
      541 ggacactcct ttaagacccc agggccgctg gaggccttcg aggagatccc agtggacgtg
      601 gcggaggccg aggccttcct gcctggcttc tcagcagagg cctggtgtaa cgggctcccc
      661 taccccagcc aggagcatgg cccccaagtc ctgcagggtt cagaggtcaa agtcaagccc
      721 ccagttctgg agagtggtgc tgggatgttc tgctaccagc ctcccttgca gcatatgtac
      781 tgctcctccc agcccccctt ccaccagtac tcgccaggtg gtggcagcta ccccataccc
      841 tacctgggct cctcacacta tcagtaccag cgaatggcac cccaggccag caccgatggg
      901 caccagcctc tcttcccaaa acccatctat tcctacagca tcctcatctt catggccctt
      961 aagaacagta aaactgggag ccttcccgtc agcgagatct acaattttat gacggagcac
     1021 tttccttact tcaagacagc acccgatggc tggaagaatt ctgtccggca caacctatcc
     1081 ctcaacaagt gcttcgagaa ggtggagaac aaatcaggaa gttcctcccg caagggctgc
     1141 ctgtgggccc tcaatccggc caagatcgac aagatgcaag aggagctgca aaaatggaag
     1201 aggaaagatc ccattgctgt gcgcaaaagc atggccaagc caggcctggc ccctcctgga
     1261 cccccgcagc cattgttccc acagccggac gggcaccttg agctgcgggc ccagccaggc
     1321 accccccagg actcgcctct gcctgcccac accccaccca gccacagtgc caagctactg
     1381 gccgagcctt ccccagccag gactatgcac gacaccctgc tgccagatgg agaccttggc
     1441 actgacctgg atgccatcaa tccctcactc actgacttcg acttccaggg aaacctgtgg
     1501 gaacagttga aggatgatag cttggccctc gaccccctgg tactggtgac ctcatccccg
     1561 acatcatctt cgatgccacc accccagcca ccacctcact gcttcccccc tgggccctgt
     1621 ctgacagaga caggcagtgg ggcaggtgac ttggcagccc cgggcagtgg tggctccggg
     1681 gcactgggtg acctgcacct caccaccctc tactctgcct ttatggagct ggagcccacg
     1741 ccccccacgg cccctgcagg cccctctgtg tacctcagcc ccagctccaa gcccgtggcc
     1801 ctggcatgag ctgtgcccag cttcgtcagc tccagcgttt gcctggtctg gaagtcctgg
     1861 ccggccgccc acatcgggct caccttaaag gtcaaggaag gaaaatacta cctgtcccct
     1921 atgccactaa gccaacgtgt gtgtcagctg gtagctgggg gcgcagagga catcacctgg
     1981 ggtgctgcct ctcacacatt tctgccacgt ggtggcccag ctcctcaccc agggccccca
     2041 aagagcaagc gtctgggcaa gaggaaaatg ccctgtccct agctcacact catccacact
     2101 taagccctcg tgcacacaca caaattattc agatgtacac ccacccacat atcttacagc
     2161 cagaggaacc agcactccat cactgagagc ccgacttcgt ttctggggca actgagagct
     2221 gagcgctttg cttaccaaaa gctcagggcc ctgtgccagg ccaaagatcc ccccagaccc
     2281 ccattctgac atccacatgc tctgcagtcc tggccccctc gtcattttct ttcccagaag
     2341 cgccctgtat ttattccccc atcttcatcc caacagccca gcaagaagga ggagacagag
     2401 agctcctccc tgggttgtct gtggaccccc ccaggagctg ctaattggca gcacccactc
     2461 agccattctc tacccatcct tagtacatgc tctgtccagc tttccccagg gtgacataca
     2521 gaaggggcaa catctacccg ggcaccaaac tgagcccaat tccgaagcag tgtttggaaa
     2581 agcccttgcc ctcggaaact tgaacatgtc ctttttcccc agtcccgggt gcaggaaggg
     2641 ccccctccag gtcaccacaa tctcactcct cctccagaaa gaaaagttca catagtttag
     2701 gtcctggctt aactctactt atgatggttc aacttacact ttttcaactt taagatggtg
     2761 caaaagcaat acacattcag tatgttcctc gacttaggat gcggttatgt ccgataaacc
     2821 cattgtaaat tgaaaccacc gaaagtcaaa aaccactttc gacttacgat gtttcccact
     2881 cacgatgggt ttctccggat gtagccccat cataagttga ggagcacctg ttagttactt
     2941 ccaactgtct caggcaacct gggcattcag gagaaaagcc tggcacaggg tgacagggaa
     3001 gcacccatgc aaagcacccc cgctttgact gcttggcaga cctagggtgc ccgggaagca
     3061 caagggatac ccttggccct gcggggtgtg gcccaggtgc ctgccatgag cctgacccca
     3121 tcgaggggga acctcagccc accctgggcc tgggggtgac aagaacttcc acaggttggc
     3181 cccaggctta taggaggcat aagcagatcc cgcgatggct tgtcattgtc ccctgtcctg
     3241 gaacaataaa gcaagtgcct tgtggtctca cta
//
