LOCUS       XM_011525362            3521 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens forkhead box N1 (FOXN1), transcript variant
            X3, mRNA.
ACCESSION   XM_011525362
VERSION     XM_011525362.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000017.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011525362.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
     gene            1..3521
                     /gene="FOXN1"
                     /gene_synonym="FKHL20; RONU; TIDAND; TLIND; WHN"
                     /note="forkhead box N1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 1 EST, 8 long SRA
                     reads, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:8456"
                     /db_xref="HGNC:HGNC:12765"
                     /db_xref="MIM:600838"
     CDS             111..2057
                     /gene="FOXN1"
                     /gene_synonym="FKHL20; RONU; TIDAND; TLIND; WHN"
                     /codon_start=1
                     /product="forkhead box protein N1 isoform X2"
                     /protein_id="XP_011523664.1"
                     /db_xref="GeneID:8456"
                     /db_xref="HGNC:HGNC:12765"
                     /db_xref="MIM:600838"
                     /translation="MVSLPPPQSDVTLPGPTRLEGERQGDLMQAPGLPGSPAPQSHAG
                     FSCSSFVSDGPPERTPSLPPHSPRIASPGPEQVQGHCPAGPGPGPFRLSPSDKYPGFG
                     FEEAAASSPGRFLKGSHAPFHPYKRPFHEDVFPEAETTLALKGHSFKTPGPLEAFEEI
                     PVDVAEAEAFLPGFSAEAWCNGLPYPSQEHGPQVLQGSEVKVKPPVLESGAGMFCYQP
                     PLQHMYCSSQPPFHQYSPGGGSYPIPYLGSSHYQYQRMAPQASTDGHQPLFPKPIYSY
                     SILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVEN
                     KSGSSSRKGCLWALNPAKIDKMQEELQKWKRKDPIAVRKSMAKPEELDSLIGDKREKL
                     GSPLLGCPPPGLSGSGPIRPLAPPAGLSPPLHSLHPAPGPIPGKNPLQDLLMGHTPSC
                     YGQTYLHLSPGLAPPGPPQPLFPQPDGHLELRAQPGTPQDSPLPAHTPPSHSAKLLAE
                     PSPARTMHDTLLPDGDLGTDLDAINPSLTDFDFQGNLWEQLKDDSLALDPLVLVTSSP
                     TSSSMPPPQPPPHCFPPGPCLTETGSGAGDLAAPGSGGSGALGDLHLTTLYSAFMELE
                     PTPPTAPAGPSVYLSPSSKPVALA"
ORIGIN      
        1 acagacacag gacggccgag ctgacggact gacagacgga cagagctcct ggccccccag
       61 acccgggccc ccacgccgac ctgcttcact gagcaggcca ggactgggtg atggtgtcgc
      121 tacccccgcc gcagtctgac gtcacgctgc cgggccccac cagactggag ggcgagcgcc
      181 aaggggacct catgcaggca ccgggcctcc caggctcccc tgccccacag agtcatgccg
      241 gcttcagctg ctcgtcattt gtgtccgacg gccctccaga gaggacaccc tcactgcccc
      301 cacacagccc ccgcattgcg tcaccagggc ccgagcaagt ccagggccac tgcccagccg
      361 gccccggccc tgggcccttc aggctctcac cctcagacaa gtatcctggc tttggctttg
      421 aggaggccgc agcaagcagc cctgggcgat tcctcaaggg cagccacgcg cccttccacc
      481 cgtacaagcg gcctttccat gaggacgtct tcccagaggc cgagaccacc ctggccctca
      541 aaggacactc ctttaagacc ccagggccgc tggaggcctt cgaggagatc ccagtggacg
      601 tggcggaggc cgaggccttc ctgcctggct tctcagcaga ggcctggtgt aacgggctcc
      661 cctaccccag ccaggagcat ggcccccaag tcctgcaggg ttcagaggtc aaagtcaagc
      721 ccccagttct ggagagtggt gctgggatgt tctgctacca gcctcccttg cagcatatgt
      781 actgctcctc ccagcccccc ttccaccagt actcgccagg tggtggcagc taccccatac
      841 cctacctggg ctcctcacac tatcagtacc agcgaatggc accccaggcc agcaccgatg
      901 ggcaccagcc tctcttccca aaacccatct attcctacag catcctcatc ttcatggccc
      961 ttaagaacag taaaactggg agccttcccg tcagcgagat ctacaatttt atgacggagc
     1021 actttcctta cttcaagaca gcacccgatg gctggaagaa ttctgtccgg cacaacctat
     1081 ccctcaacaa gtgcttcgag aaggtggaga acaaatcagg aagttcctcc cgcaagggct
     1141 gcctgtgggc cctcaatccg gccaagatcg acaagatgca agaggagctg caaaaatgga
     1201 agaggaaaga tcccattgct gtgcgcaaaa gcatggccaa gccagaagag ctggacagcc
     1261 tcattggaga caagagagaa aagctgggct ccccactcct gggctgtccg ccccctgggc
     1321 tgtccggctc aggccccatc cggcccctgg cacccccagc tggcctctcc ccaccactgc
     1381 actcactcca cccagctcca ggccccattc ctggcaagaa ccccctgcag gacctactta
     1441 tggggcacac accctcctgc tatgggcaga catacttgca cctctcacca ggcctggccc
     1501 ctcctggacc cccgcagcca ttgttcccac agccggacgg gcaccttgag ctgcgggccc
     1561 agccaggcac cccccaggac tcgcctctgc ctgcccacac cccacccagc cacagtgcca
     1621 agctactggc cgagccttcc ccagccagga ctatgcacga caccctgctg ccagatggag
     1681 accttggcac tgacctggat gccatcaatc cctcactcac tgacttcgac ttccagggaa
     1741 acctgtggga acagttgaag gatgatagct tggccctcga ccccctggta ctggtgacct
     1801 catccccgac atcatcttcg atgccaccac cccagccacc acctcactgc ttcccccctg
     1861 ggccctgtct gacagagaca ggcagtgggg caggtgactt ggcagccccg ggcagtggtg
     1921 gctccggggc actgggtgac ctgcacctca ccaccctcta ctctgccttt atggagctgg
     1981 agcccacgcc ccccacggcc cctgcaggcc cctctgtgta cctcagcccc agctccaagc
     2041 ccgtggccct ggcatgagct gtgcccagct tcgtcagctc cagcgtttgc ctggtctgga
     2101 agtcctggcc ggccgcccac atcgggctca ccttaaaggt caaggaagga aaatactacc
     2161 tgtcccctat gccactaagc caacgtgtgt gtcagctggt agctgggggc gcagaggaca
     2221 tcacctgggg tgctgcctct cacacatttc tgccacgtgg tggcccagct cctcacccag
     2281 ggcccccaaa gagcaagcgt ctgggcaaga ggaaaatgcc ctgtccctag ctcacactca
     2341 tccacactta agccctcgtg cacacacaca aattattcag atgtacaccc acccacatat
     2401 cttacagcca gaggaaccag cactccatca ctgagagccc gacttcgttt ctggggcaac
     2461 tgagagctga gcgctttgct taccaaaagc tcagggccct gtgccaggcc aaagatcccc
     2521 ccagaccccc attctgacat ccacatgctc tgcagtcctg gccccctcgt cattttcttt
     2581 cccagaagcg ccctgtattt attcccccat cttcatccca acagcccagc aagaaggagg
     2641 agacagagag ctcctccctg ggttgtctgt ggaccccccc aggagctgct aattggcagc
     2701 acccactcag ccattctcta cccatcctta gtacatgctc tgtccagctt tccccagggt
     2761 gacatacaga aggggcaaca tctacccggg caccaaactg agcccaattc cgaagcagtg
     2821 tttggaaaag cccttgccct cggaaacttg aacatgtcct ttttccccag tcccgggtgc
     2881 aggaagggcc ccctccaggt caccacaatc tcactcctcc tccagaaaga aaagttcaca
     2941 tagtttaggt cctggcttaa ctctacttat gatggttcaa cttacacttt ttcaacttta
     3001 agatggtgca aaagcaatac acattcagta tgttcctcga cttaggatgc ggttatgtcc
     3061 gataaaccca ttgtaaattg aaaccaccga aagtcaaaaa ccactttcga cttacgatgt
     3121 ttcccactca cgatgggttt ctccggatgt agccccatca taagttgagg agcacctgtt
     3181 agttacttcc aactgtctca ggcaacctgg gcattcagga gaaaagcctg gcacagggtg
     3241 acagggaagc acccatgcaa agcacccccg ctttgactgc ttggcagacc tagggtgccc
     3301 gggaagcaca agggataccc ttggccctgc ggggtgtggc ccaggtgcct gccatgagcc
     3361 tgaccccatc gagggggaac ctcagcccac cctgggcctg ggggtgacaa gaacttccac
     3421 aggttggccc caggcttata ggaggcataa gcagatcccg cgatggcttg tcattgtccc
     3481 ctgtcctgga acaataaagc aagtgccttg tggtctcact a
//
