LOCUS       NM_001126334            3109 bp    mRNA    linear   PRI 03-APR-2024
DEFINITION  Homo sapiens forkhead box D4 like 5 (FOXD4L5), mRNA.
ACCESSION   NM_001126334 XR_016691
VERSION     NM_001126334.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3109)
  AUTHORS   Humphray,S.J., Oliver,K., Hunt,A.R., Plumb,R.W., Loveland,J.E.,
            Howe,K.L., Andrews,T.D., Searle,S., Hunt,S.E., Scott,C.E.,
            Jones,M.C., Ainscough,R., Almeida,J.P., Ambrose,K.D., Ashwell,R.I.,
            Babbage,A.K., Babbage,S., Bagguley,C.L., Bailey,J., Banerjee,R.,
            Barker,D.J., Barlow,K.F., Bates,K., Beasley,H., Beasley,O.,
            Bird,C.P., Bray-Allen,S., Brown,A.J., Brown,J.Y., Burford,D.,
            Burrill,W., Burton,J., Carder,C., Carter,N.P., Chapman,J.C.,
            Chen,Y., Clarke,G., Clark,S.Y., Clee,C.M., Clegg,S., Collier,R.E.,
            Corby,N., Crosier,M., Cummings,A.T., Davies,J., Dhami,P., Dunn,M.,
            Dutta,I., Dyer,L.W., Earthrowl,M.E., Faulkner,L., Fleming,C.J.,
            Frankish,A., Frankland,J.A., French,L., Fricker,D.G., Garner,P.,
            Garnett,J., Ghori,J., Gilbert,J.G., Glison,C., Grafham,D.V.,
            Gribble,S., Griffiths,C., Griffiths-Jones,S., Grocock,R., Guy,J.,
            Hall,R.E., Hammond,S., Harley,J.L., Harrison,E.S., Hart,E.A.,
            Heath,P.D., Henderson,C.D., Hopkins,B.L., Howard,P.J., Howden,P.J.,
            Huckle,E., Johnson,C., Johnson,D., Joy,A.A., Kay,M., Keenan,S.,
            Kershaw,J.K., Kimberley,A.M., King,A., Knights,A., Laird,G.K.,
            Langford,C., Lawlor,S., Leongamornlert,D.A., Leversha,M., Lloyd,C.,
            Lloyd,D.M., Lovell,J., Martin,S., Mashreghi-Mohammadi,M.,
            Matthews,L., McLaren,S., McLay,K.E., McMurray,A., Milne,S.,
            Nickerson,T., Nisbett,J., Nordsiek,G., Pearce,A.V., Peck,A.I.,
            Porter,K.M., Pandian,R., Pelan,S., Phillimore,B., Povey,S.,
            Ramsey,Y., Rand,V., Scharfe,M., Sehra,H.K., Shownkeen,R.,
            Sims,S.K., Skuce,C.D., Smith,M., Steward,C.A., Swarbreck,D.,
            Sycamore,N., Tester,J., Thorpe,A., Tracey,A., Tromans,A.,
            Thomas,D.W., Wall,M., Wallis,J.M., West,A.P., Whitehead,S.L.,
            Willey,D.L., Williams,S.A., Wilming,L., Wray,P.W., Young,L.,
            Ashurst,J.L., Coulson,A., Blocker,H., Durbin,R., Sulston,J.E.,
            Hubbard,T., Jackson,M.J., Bentley,D.R., Beck,S., Rogers,J. and
            Dunham,I.
  TITLE     DNA sequence and analysis of human chromosome 9
  JOURNAL   Nature 429 (6990), 369-374 (2004)
   PUBMED   15164053
REFERENCE   2  (bases 1 to 3109)
  AUTHORS   Freyaldenhoven,B.S., Fried,C. and Wielckens,K.
  TITLE     FOXD4a and FOXD4b, two new winged helix transcription factors, are
            expressed in human leukemia cell lines
  JOURNAL   Gene 294 (1-2), 131-140 (2002)
   PUBMED   12234674
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL512605.13.
            
            On May 7, 2008 this sequence version replaced XR_016691.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000377420.1/ ENSP00000366637.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3109              AL512605.13        115165-118273       c
FEATURES             Location/Qualifiers
     source          1..3109
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
                     /map="9q21.11"
     gene            1..3109
                     /gene="FOXD4L5"
                     /gene_synonym="bA15J10.2"
                     /note="forkhead box D4 like 5"
                     /db_xref="GeneID:653427"
                     /db_xref="HGNC:HGNC:18522"
     exon            1..3109
                     /gene="FOXD4L5"
                     /gene_synonym="bA15J10.2"
                     /inference="alignment:Splign:2.1.0"
     CDS             833..2083
                     /gene="FOXD4L5"
                     /gene_synonym="bA15J10.2"
                     /note="FOXD4-like 5"
                     /codon_start=1
                     /product="forkhead box protein D4-like 5"
                     /protein_id="NP_001119806.1"
                     /db_xref="CCDS:CCDS47977.1"
                     /db_xref="GeneID:653427"
                     /db_xref="HGNC:HGNC:18522"
                     /translation="MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEE
                     EARQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASED
                     ARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNL
                     SLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHP
                     FPLPAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRCPYALLHPHPLRYLLLSAP
                     VYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGS
                     GERVQGLRRVCPRPRGATATCSSDHQACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRR
                     TAPTAALPPRARCWAGTCRPRRRC"
     regulatory      2781..2786
                     /regulatory_class="polyA_signal_sequence"
                     /gene="FOXD4L5"
                     /gene_synonym="bA15J10.2"
                     /note="hexamer: AATAAA"
     polyA_site      2803
                     /gene="FOXD4L5"
                     /gene_synonym="bA15J10.2"
                     /note="major polyA site"
ORIGIN      
        1 ctctcctgcc ttccctgaat aaacttacac aatttagtgc tgggacattt ggaccttttc
       61 tgaaaatttg agtcagggag agcatcttgg ggaggtggga aggaaggtag aaggagcaaa
      121 gcaacacccc cctgaagcct gggaatattg tcagaacctt aaatataatt cagctcacca
      181 ttctgggtaa ggacagactc taccaatgaa aatgggtgat taccagctgt gaaacacaaa
      241 aacatacttt tacggttaca cattccttta caaacaaccg tgtacatttc agcctcctgc
      301 cccaccattt cttttctcca ggagggaagg ctgcatgtcg aggtggtcat agaatgttga
      361 gtatcatact ttcctacctc gcttttattt gcgcgggttt aaatgcgcct taacagaacc
      421 cgtgcaaagg cttgccaact gtctggctgc accggatgag tagagcatct tccttggtgg
      481 caggtgggtg cgaggaggag gggcctgggc ttttctccgg acagtgtttg cccagaagac
      541 catcatccct ggactacgtt aggagtaagt ggcaccgctc cgaggtgggg gaagaagggt
      601 tataaagggg ggagtccacc acacatggtc ttgaagaagc ttttataaaa ggcaaaggca
      661 tctttgccgg acgttgttgc aaaggagtag aaacaagcag acgaaaacat cccaaagggt
      721 aaccactagc attgctgctt cttgcaacat tcatcccagg cttccagctc agcccgcccc
      781 aggccaggtg atcggccgcc acatcccctg cgactgaagc acctgctcct ccatgaacct
      841 gccaagagct gagcgccctc gctccacacc gcagcgcagc ctccgggact ccgatgggga
      901 agacggtaaa atcgatgtcc tgggagagga ggaagatgaa gacgaggtgg aagacgagga
      961 ggaggaggcg agacagcagt tcctagagca gtcactccag ccggggctgc aggtggcccg
     1021 gtggggcggg gttgcgcttc cccgagagca catcgagggc ggcggcggcc cgagtgaccc
     1081 ctcagagttt ggcaccaagt tcagggcacc gccaaggtct gcggcggcct ctgaagatgc
     1141 ccggcagccg gcaaagcccc cctactcgta catcgcgctc atcaccatgg ccatcctgca
     1201 aaacccgcac aagcgcctca cgctcagcgg catctgcgcc ttcattagtg gccgcttccc
     1261 atactaccgc cgcaagttcc ccgcctggca gaacagcatc cgccacaacc tctcgctgaa
     1321 cgactgcttc gttaagatcc cccgcgagcc gggccaccca ggcaagggca actactggag
     1381 cctggacccc gcctcccagg acatgttcga caatggcagc tttctccggc gtaggaagcg
     1441 tttcaagcgc caccaactga ccccgggagc ccacctgccc caccccttcc ctctacctgc
     1501 tgcgcacgcc gccctgcaca acccccaccc aggccctctg cttggggccc ctgccccgcc
     1561 gcagccagtc ccgggggcct accccaacac cgcccccggg agatgccctt acgctctgct
     1621 gcacccgcat cctcttcgct acctactgct ctcggccccc gtctatgccg gggcaccgaa
     1681 gaaagcagaa ggcgcggacc tggcgacccc ggcacccttc ccgtgctgca gccctcactt
     1741 ggtcctcagc cttgggagga gggcaagggt ctggcgtcgc caccgggagg cggatgcatc
     1801 tctttcagca ttgagagtat tatgcaaggg gtcaggggag cgggtacagg ggctgcgcag
     1861 agtttgtccc cgaccgcgtg gagctactgc cacctgctcc agcgaccatc aagcctgttg
     1921 catccccaaa ccgctgcccc tttgctgcaa gtgtccgccg ccgctgctgc tcggacaatt
     1981 ttgcagcaat agcagcagca tcaggaggac tgcgccaacg gctgcgctcc caccaagggc
     2041 gcggtgctgg gcgggcacct gtcggcctcg tcggcgctgc tgaggtatca ggcagtggcg
     2101 gagggctcta ggctgacatc gctggctgcc cctttgggcg gagaggggac ctcaccagtt
     2161 tttttagtat cgcccacgcc cagttccctg gccaactccg cagggccctc ctagagccag
     2221 gtgggagtgg ggagcgaccc gcagctgctc actccacctt gcgcggccca tactgggcgt
     2281 gtgcatctga atcccgctgg agagcaaaca cgaacttctg ttcgttcgct gcaaaatggt
     2341 tagaaagatt acattcctct aagctggatt acgttcctct aaaaaccacc tgaacgtaac
     2401 cttcgcaggg cgtcaagtca tcttttcttg ccttcggttg tggcttctat ggctgtcccg
     2461 atttgcacat tgtcatcttt gaaggttagt gacatagcat tcatcttctg ttgtcacctt
     2521 ttccgtcatt ccctgtatgc ctgatggaca ggtttcactg aagttcagag aacagcatgc
     2581 aaaattagct accaattaat ctttatgaag tgagctgcat ttctagccac actgagctta
     2641 tgttttagca ggaagcattt ttgggaaatg tttatgttag agtttgccct tcttgacaag
     2701 gtgagacata aatgtctact ttagagacat gaattaagat gggaagatat ttgggggaat
     2761 catttactca aacgctaagt aataaaggta cacaaagggc aaattatact agatttcttt
     2821 cccacttgtt ttctatgtct cttgcaattc accttgattc ccttcagttt ctgtttaatg
     2881 tagaaagtgg cattttcatt attttaagct tctagcacaa tgaaagaatt tctctttttc
     2941 atgaacagga tcataaatgg aagggaggaa gagtgtccta tatcatattt attgttcaac
     3001 aaaacactgc tccacggctt caattcagtt taaaaaagag aatttattga atatctaaca
     3061 catacataaa aggcagtaaa gacaaatgag aagaggggag gatattgaa
//
