LOCUS       NM_203408               2563 bp    mRNA    linear   PRI 12-JUN-2024
DEFINITION  Homo sapiens family with sequence similarity 47 member A (FAM47A),
            mRNA.
ACCESSION   NM_203408
VERSION     NM_203408.4
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2563)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 2563)
  AUTHORS   Teumer,A., Holtfreter,B., Volker,U., Petersmann,A., Nauck,M.,
            Biffar,R., Volzke,H., Kroemer,H.K., Meisel,P., Homuth,G. and
            Kocher,T.
  TITLE     Genome-wide association study of chronic periodontitis in a general
            German population
  JOURNAL   J Clin Periodontol 40 (11), 977-985 (2013)
   PUBMED   24024966
REFERENCE   3  (bases 1 to 2563)
  AUTHORS   Yu,L.R., Zhu,Z., Chan,K.C., Issaq,H.J., Dimitrov,D.S. and
            Veenstra,T.D.
  TITLE     Improved titanium dioxide enrichment of phosphopeptides from HeLa
            cells and high confident phosphopeptide identification by
            cross-validation of MS/MS and MS/MS/MS spectra
  JOURNAL   J Proteome Res 6 (11), 4150-4162 (2007)
   PUBMED   17924679
  REMARK    GeneRIF: Includes the identification of a phosphopeptide from this
            protein.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL591625.8.
            This sequence is a reference standard in the RefSeqGene project.
            
            On Oct 19, 2020 this sequence version replaced NM_203408.3.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000346193.5/ ENSP00000345029.3
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2563              AL591625.8         116367-118929       c
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
                     /map="Xp21.1"
     gene            1..2563
                     /gene="FAM47A"
                     /note="family with sequence similarity 47 member A"
                     /db_xref="GeneID:158724"
                     /db_xref="HGNC:HGNC:29962"
     exon            1..2563
                     /gene="FAM47A"
                     /inference="alignment:Splign:2.1.0"
     CDS             37..2412
                     /gene="FAM47A"
                     /codon_start=1
                     /product="protein FAM47A"
                     /protein_id="NP_981953.2"
                     /db_xref="CCDS:CCDS43926.1"
                     /db_xref="GeneID:158724"
                     /db_xref="HGNC:HGNC:29962"
                     /translation="MGDQRLQDWLRSPGMDSKPWYCNKRPSKCFAKCKHRRLRFPPMD
                     TQNWVFVKEGMDDFRYGCPSPEDTLVCRRDEFLLPKISLRGPQADPKSGQKKLLKKAA
                     LFSKLSPAQLARKAFVEQVEAQLMAKHPLAMYPNLGEDMPPDLLLQVLKHLDPERELE
                     DAWACCETQEKTTEVPTEPGKHPCGEFCLKPPETPVSHLLPEPPETGVSHLSPEPPKT
                     PVSSLRPEPPETGVSHLRPEPPETGVSHIRPGPPITRRRSSLLRQLLKLDSERKLEDA
                     RAPCEGREKTTDEPTEPGKYPCGKFCPRPFETPLSHLRQEPPKTPVSSLRPEPPETGE
                     SHLRLEHSKTRRGSSLRSEPSETGVSRLRLAPPKTRRGSSLHAEPSKTGVSHLSPEPP
                     KTEVSHLHPVPPKTGVCHLRLEPPDTSQVSNLLLYILKVLDSGRTLKDVWDRCEARVK
                     KTKEPTEPHKSPCGEPCLQPPETQVSHPHPEHPKTRRRSSLHSQPPKTRRTSSLRSEP
                     PKTRRTSSLRSEPPKTRRTSSLGPEPPKTRRVSSLRPELPKSRRVSSLHPEPPKAPES
                     HQFSEPPKIRASYIKELLQEDTPSTKECVSDSLQYRYTSEKLREFFKWAGDLGADEES
                     IRNLFDFTPKYRATHEDQKFKKVKECSSELKYSMELDEKDEDKFFSQEKYWGRKFHTP
                     SNSYTAQRVKMKYGAWYLKPKLWKKLRSDEPLIDPKLLLKKPDEPDVLDDLYGPIAFK
                     DFILSKGYEMPGIIQRLFARRGWTYDSVKTPIQRAMIFYKYKEIVEASEED"
ORIGIN      
        1 agaagctgga gacgtggcac cacagcgagg gccaccatgg gggaccagag gctgcaggac
       61 tggctgaggt ccccgggcat ggactccaag ccctggtact gtaacaaacg gccttccaag
      121 tgcttcgcga agtgcaagca caggcgcctg aggttcccac ccatggacac ccagaactgg
      181 gtatttgtga aggagggcat ggacgacttc cgctacggct gtccgtctcc cgaagatact
      241 ctcgtttgtc gccgtgacga gtttttactc cccaaaatat ctctcagagg tccccaagct
      301 gaccccaaaa gcgggcagaa aaagctgctc aagaaagcgg ccctattttc caagctctct
      361 ccagcccagc tagcacggaa ggcgttcgta gagcaagtgg aagcccagct aatggccaag
      421 catcccttgg ccatgtaccc caatctggga gaagatatgc ctccagatct cctactacag
      481 gtgctgaaac acctggatcc tgagagggag ctggaggacg cttgggcttg ttgtgagacc
      541 caggagaaga caacagaggt acccactgag cctggtaaac atccctgtgg ggaattctgc
      601 ctgaagcctc ccgagactcc ggtgtcccat ctcctcccag agcctcccga gactggagtg
      661 tcccatctaa gcccggagcc tcccaagact ccggtgtcca gtctccgccc ggagcctcct
      721 gagactggag tgtcccatct ccgcccggag cctccagaga ctggagtgtc ccatatccgc
      781 ccggggcctc ccatcactcg tcggagatcc agtctcctac gacagctgct gaaactggat
      841 tctgagagga agctggaaga cgcacgggct ccttgtgagg gccgggagaa gacaactgac
      901 gaacccacag agcctggtaa atacccttgt gggaaattct gtcctcggcc tttcgagact
      961 ccactgtccc atctccgcca ggagcctccc aagactccgg tgtccagtct ccgcccggag
     1021 cctccggaga ctggagagtc ccatctccgc ctagagcatt ccaagactcg tcgggggtcc
     1081 agtctccgct cggagccttc cgagactgga gtgtcccgtc tccgcctagc gcctcccaag
     1141 actcgtcggg ggtccagtct ccacgcggag ccttccaaga ctggagtgtc ccatctcagc
     1201 ccggagcctc ccaagactga agtgtctcat ctccacccag tgcctcccaa gactggagtg
     1261 tgccatctcc gcctggaacc tcccgacact agtcaggtgt ccaatctcct actatacata
     1321 ctgaaagtgc tggattctgg gaggacgctg aaggacgtat gggatcgttg tgaggcccgg
     1381 gtgaagaaaa ctaaggaacc caccgagcct cataaatccc cttgtgggga accctgcctg
     1441 cagcctcccg agactcaggt gtcccatccc cacccggaac atcccaagac acgtcggagg
     1501 tccagtctcc actcgcagcc tcccaagact cgtcggacgt ccagtctccg ctcggagcct
     1561 cccaagactc gtcggacgtc cagtctccgc tcggagcctc ccaagactcg tcggacgtcc
     1621 agtctcggtc cggagcctcc caagactcgt cgagtgtcca gtctccgccc ggagcttccc
     1681 aagagtcgtc gggtgtccag tctccacccg gagcctccca aagctccaga gtcccatcaa
     1741 ttctcggagc ctcccaagat tcgagcatcc tacataaaag aactgcttca ggaagataca
     1801 ccaagcacaa aagagtgcgt ttctgactct cttcaatata gatacacatc ggaaaaactc
     1861 cgtgaattct tcaagtgggc tggagacctg ggagctgatg aagaatccat caggaatctg
     1921 tttgacttta cccccaagta cagagcaacc catgaggacc aaaagtttaa gaaagtaaag
     1981 gagtgttcct cagagctgaa gtacagcatg gagctagatg aaaaggatga ggacaaattc
     2041 ttctcacagg aaaaatactg gggcaggaaa ttccacacgc catcgaattc ttataccgca
     2101 cagcgtgtga agatgaagta tggagcatgg tacctcaagc ctaagttgtg gaaaaagcta
     2161 agaagtgatg aacctttgat tgaccccaag ctcttactta aaaagcctga tgaacctgac
     2221 gttcttgacg atctttatgg accaattgcc tttaaggatt tcattctaag caagggctat
     2281 gaaatgcctg gcatcattca aaggctgttt gccaggaggg gatggactta tgactctgtt
     2341 aagactccta ttcaacgtgc aatgatattt tacaagtaca aagaaatcgt agaggcatcg
     2401 gaagaagatt aggcagtttt caatttacta ctcaattggg tatttcttgc tctcatttta
     2461 atcatcaatc ataatttatg atgactggcc ccgtggatgc acaactttgg caacatctgt
     2521 aaattcaata cctaatgttt atcaatattt cttaatgaac tgc
//
