LOCUS       NM_013300               1101 bp    mRNA    linear   PRI 06-JUN-2024
DEFINITION  Homo sapiens family with sequence similarity 216 member A
            (FAM216A), mRNA.
ACCESSION   NM_013300
VERSION     NM_013300.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Kimura,K., Wakamatsu,A., Suzuki,Y., Ota,T., Nishikawa,T.,
            Yamashita,R., Yamamoto,J., Sekine,M., Tsuritani,K., Wakaguri,H.,
            Ishii,S., Sugiyama,T., Saito,K., Isono,Y., Irie,R., Kushida,N.,
            Yoneyama,T., Otsuka,R., Kanda,K., Yokoi,T., Kondo,H., Wagatsuma,M.,
            Murakawa,K., Ishida,S., Ishibashi,T., Takahashi-Fujii,A.,
            Tanase,T., Nagai,K., Kikuchi,H., Nakai,K., Isogai,T. and Sugano,S.
  TITLE     Diversification of transcriptional modulation: large-scale
            identification and characterization of putative alternative
            promoters of human genes
  JOURNAL   Genome Res 16 (1), 55-65 (2006)
   PUBMED   16344560
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK225731.1.
            
            On Nov 22, 2018 this sequence version replaced NM_013300.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC020967.1, AK225731.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1965299, SAMEA1966682
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000377673.10/ ENSP00000366901.5
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1101              AK225731.1         410-1510
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
                     /map="12q24.11"
     gene            1..1101
                     /gene="FAM216A"
                     /gene_synonym="C12orf24; HSU79274"
                     /note="family with sequence similarity 216 member A"
                     /db_xref="GeneID:29902"
                     /db_xref="HGNC:HGNC:30180"
     exon            1..174
                     /gene="FAM216A"
                     /gene_synonym="C12orf24; HSU79274"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..853
                     /gene="FAM216A"
                     /gene_synonym="C12orf24; HSU79274"
                     /note="protein predicted by clone 23733; uncharacterized
                     protein C12orf24"
                     /codon_start=1
                     /product="protein FAM216A"
                     /protein_id="NP_037432.2"
                     /db_xref="CCDS:CCDS31899.1"
                     /db_xref="GeneID:29902"
                     /db_xref="HGNC:HGNC:30180"
                     /translation="MLGQLLPHTARGLGAAEMPGQGPGSDWTERSSSAEPPAVAGTEG
                     GGGGSAGYSCYQNSKGSDRIKDGYKVNSHIAKLQELWKTPQNQTIHLSKSMMEASFFK
                     HPDLTTGQKRYLCSIAKIYNANYLKMLMKRQYMHVLQHSSQKPGVLTHHRSRLSSRYS
                     QKQHYPCTTWRHQLEREDSGSSDIAAASAPEMLIQHSLWRPVRNKEGIKTGYASKTRC
                     KSLKIFRRPRKLFMQTVSSDDSESHMSEEKKEEDLLNNFMQSMSIEEQGEHLMLT"
     exon            175..215
                     /gene="FAM216A"
                     /gene_synonym="C12orf24; HSU79274"
                     /inference="alignment:Splign:2.1.0"
     exon            216..337
                     /gene="FAM216A"
                     /gene_synonym="C12orf24; HSU79274"
                     /inference="alignment:Splign:2.1.0"
     exon            338..467
                     /gene="FAM216A"
                     /gene_synonym="C12orf24; HSU79274"
                     /inference="alignment:Splign:2.1.0"
     exon            468..651
                     /gene="FAM216A"
                     /gene_synonym="C12orf24; HSU79274"
                     /inference="alignment:Splign:2.1.0"
     exon            652..734
                     /gene="FAM216A"
                     /gene_synonym="C12orf24; HSU79274"
                     /inference="alignment:Splign:2.1.0"
     exon            735..1101
                     /gene="FAM216A"
                     /gene_synonym="C12orf24; HSU79274"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1079..1084
                     /regulatory_class="polyA_signal_sequence"
                     /gene="FAM216A"
                     /gene_synonym="C12orf24; HSU79274"
                     /note="hexamer: ATTAAA"
     polyA_site      1101
                     /gene="FAM216A"
                     /gene_synonym="C12orf24; HSU79274"
                     /note="major polyA site"
ORIGIN      
        1 agcctgacgc acgcgtgctg tcgggggagg gatgctggga cagctgctcc cgcacacggc
       61 tcgcggtctc ggcgccgcgg agatgcccgg ccagggtccg gggtccgact ggacggagcg
      121 tagctcttct gcagagccgc ccgctgtggc cgggaccgag ggtggcggcg gcggatcagc
      181 tggatactct tgttaccaga attccaaagg ttctgataga atcaaagatg gatacaaagt
      241 gaactcacac atagctaagc tgcaagagtt atggaaaact ccccaaaatc aaacaatcca
      301 cctctctaaa tcaatgatgg aggcgtcctt tttcaagcat ccagacctca ccacaggcca
      361 gaagcgttac ctgtgcagca ttgctaaaat ctataatgca aactatctga agatgttaat
      421 gaagaggcag tacatgcacg tacttcagca cagctcacaa aagccaggtg tcctcactca
      481 tcacagaagc cgccttagct cccgttactc acagaaacag cattaccctt gcactacatg
      541 gcgacatcaa ctggagagag aggactcggg gtcttctgat atcgcagctg catctgcacc
      601 tgaaatgctc atacagcatt ccctttggcg gccagtgaga aacaaagaag ggataaaaac
      661 tggatatgca tctaaaacaa gatgtaagtc actgaagatt tttagaagac caaggaaact
      721 gttcatgcaa acagtttctt cagatgattc tgaatcacac atgagtgaag aaaaaaagga
      781 agaagattta ctaaataatt ttatgcaatc aatgtcaatt gaagaacagg gagaacatct
      841 gatgttaact tgacagtctt gtctcgtgta ttgaattcgt gccaaaggtg agggtaaggg
      901 gttgtgagtt gtgtcctgta tgtttaggat ggtattgtta tttattaaat cattaagtaa
      961 ttttggtttg ttcagaaact taaaacaatg taattggtct gatgtagttc catgtaccaa
     1021 tgatagttat gtaagaaaat ttacatgtaa catatacttg tacttctagc tagatacaat
     1081 taaaactttt cttgcattca a
//
