LOCUS       NM_001085480            1032 bp    mRNA    linear   PRI 08-JUN-2024
DEFINITION  Homo sapiens family with sequence similarity 162 member B
            (FAM162B), mRNA.
ACCESSION   NM_001085480 XM_001134427 XM_001134443
VERSION     NM_001085480.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Gu,J., Chen,M., Shete,S., Amos,C.I., Kamat,A., Ye,Y., Lin,J.,
            Dinney,C.P. and Wu,X.
  TITLE     A genome-wide association study identifies a locus on chromosome
            14q21 as a predictor of leukocyte telomere length and as a marker
            of susceptibility for bladder cancer
  JOURNAL   Cancer Prev Res (Phila) 4 (4), 514-521 (2011)
   PUBMED   21460395
REFERENCE   2  (bases 1 to 1032)
  AUTHORS   Mungall,A.J., Palmer,S.A., Sims,S.K., Edwards,C.A., Ashurst,J.L.,
            Wilming,L., Jones,M.C., Horton,R., Hunt,S.E., Scott,C.E.,
            Gilbert,J.G., Clamp,M.E., Bethel,G., Milne,S., Ainscough,R.,
            Almeida,J.P., Ambrose,K.D., Andrews,T.D., Ashwell,R.I.,
            Babbage,A.K., Bagguley,C.L., Bailey,J., Banerjee,R., Barker,D.J.,
            Barlow,K.F., Bates,K., Beare,D.M., Beasley,H., Beasley,O.,
            Bird,C.P., Blakey,S., Bray-Allen,S., Brook,J., Brown,A.J.,
            Brown,J.Y., Burford,D.C., Burrill,W., Burton,J., Carder,C.,
            Carter,N.P., Chapman,J.C., Clark,S.Y., Clark,G., Clee,C.M.,
            Clegg,S., Cobley,V., Collier,R.E., Collins,J.E., Colman,L.K.,
            Corby,N.R., Coville,G.J., Culley,K.M., Dhami,P., Davies,J.,
            Dunn,M., Earthrowl,M.E., Ellington,A.E., Evans,K.A., Faulkner,L.,
            Francis,M.D., Frankish,A., Frankland,J., French,L., Garner,P.,
            Garnett,J., Ghori,M.J., Gilby,L.M., Gillson,C.J., Glithero,R.J.,
            Grafham,D.V., Grant,M., Gribble,S., Griffiths,C., Griffiths,M.,
            Hall,R., Halls,K.S., Hammond,S., Harley,J.L., Hart,E.A.,
            Heath,P.D., Heathcott,R., Holmes,S.J., Howden,P.J., Howe,K.L.,
            Howell,G.R., Huckle,E., Humphray,S.J., Humphries,M.D., Hunt,A.R.,
            Johnson,C.M., Joy,A.A., Kay,M., Keenan,S.J., Kimberley,A.M.,
            King,A., Laird,G.K., Langford,C., Lawlor,S., Leongamornlert,D.A.,
            Leversha,M., Lloyd,C.R., Lloyd,D.M., Loveland,J.E., Lovell,J.,
            Martin,S., Mashreghi-Mohammadi,M., Maslen,G.L., Matthews,L.,
            McCann,O.T., McLaren,S.J., McLay,K., McMurray,A., Moore,M.J.,
            Mullikin,J.C., Niblett,D., Nickerson,T., Novik,K.L., Oliver,K.,
            Overton-Larty,E.K., Parker,A., Patel,R., Pearce,A.V., Peck,A.I.,
            Phillimore,B., Phillips,S., Plumb,R.W., Porter,K.M., Ramsey,Y.,
            Ranby,S.A., Rice,C.M., Ross,M.T., Searle,S.M., Sehra,H.K.,
            Sheridan,E., Skuce,C.D., Smith,S., Smith,M., Spraggon,L.,
            Squares,S.L., Steward,C.A., Sycamore,N., Tamlyn-Hall,G., Tester,J.,
            Theaker,A.J., Thomas,D.W., Thorpe,A., Tracey,A., Tromans,A.,
            Tubby,B., Wall,M., Wallis,J.M., West,A.P., White,S.S.,
            Whitehead,S.L., Whittaker,H., Wild,A., Willey,D.J., Wilmer,T.E.,
            Wood,J.M., Wray,P.W., Wyatt,J.C., Young,L., Younger,R.M.,
            Bentley,D.R., Coulson,A., Durbin,R., Hubbard,T., Sulston,J.E.,
            Dunham,I., Rogers,J. and Beck,S.
  TITLE     The DNA sequence and analysis of human chromosome 6
  JOURNAL   Nature 425 (6960), 805-811 (2003)
   PUBMED   14574404
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            H71557.1 and BC038997.1.
            
            On Nov 23, 2018 this sequence version replaced NM_001085480.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660803.79219.1,
                                           SRR1660803.61321.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1966682, SAMEA1968540
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000368557.6/ ENSP00000357545.4
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-99                H71557.1           5-103
            100-1032            BC038997.1         103-1035
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6q22.1"
     gene            1..1032
                     /gene="FAM162B"
                     /gene_synonym="bA86F4.2; C6orf189"
                     /note="family with sequence similarity 162 member B"
                     /db_xref="GeneID:221303"
                     /db_xref="HGNC:HGNC:21549"
     exon            1..315
                     /gene="FAM162B"
                     /gene_synonym="bA86F4.2; C6orf189"
                     /inference="alignment:Splign:2.1.0"
     CDS             144..632
                     /gene="FAM162B"
                     /gene_synonym="bA86F4.2; C6orf189"
                     /codon_start=1
                     /product="protein FAM162B"
                     /protein_id="NP_001078949.1"
                     /db_xref="CCDS:CCDS43497.1"
                     /db_xref="GeneID:221303"
                     /db_xref="HGNC:HGNC:21549"
                     /translation="MLRAVGSLLRLGRGLTVRCGPGAPLEATRRPAPALPPRGLPCYS
                     SGGAPSNSGPQGHGEIHRVPTQRRPSQFDKKILLWTGRFKSMEEIPPRIPPEMIDTAR
                     NKARVKACYIMIGLTIIACFAVIVSAKRAVERHESLTSWNLAKKAKWREEAALAAQAK
                     AK"
     exon            316..424
                     /gene="FAM162B"
                     /gene_synonym="bA86F4.2; C6orf189"
                     /inference="alignment:Splign:2.1.0"
     exon            425..533
                     /gene="FAM162B"
                     /gene_synonym="bA86F4.2; C6orf189"
                     /inference="alignment:Splign:2.1.0"
     exon            534..1032
                     /gene="FAM162B"
                     /gene_synonym="bA86F4.2; C6orf189"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1012..1017
                     /regulatory_class="polyA_signal_sequence"
                     /gene="FAM162B"
                     /gene_synonym="bA86F4.2; C6orf189"
                     /note="hexamer: TATAAA"
     polyA_site      1032
                     /gene="FAM162B"
                     /gene_synonym="bA86F4.2; C6orf189"
                     /note="major polyA site"
ORIGIN      
        1 gagtgtgcga gcgccagggg ttccagctgc acgtcccagg ctctccagcg cgcggcaggc
       61 cggggcggga cgaggagagc tgcggggaca acgcctgtgg ctgggtccgg aggtgcgggt
      121 gcggcgcggg acaagcgggc agcatgctca gggcggtcgg gagcctactg cgccttggcc
      181 gcgggctaac agtccgctgc ggccccgggg cgcctctcga ggccacgcga cggcccgcac
      241 cggctcttcc gccccggggt ctcccctgct actccagcgg cggggccccc agcaattctg
      301 ggccccaagg tcacggggag attcaccgag tccccacgca gcgcaggcct tcgcagttcg
      361 acaagaaaat cctgctgtgg acagggcgtt tcaaatcgat ggaggagatc ccgcctcgga
      421 tcccgccaga aatgatagac accgcaagaa acaaagctcg agtgaaagct tgttacataa
      481 tgattggact cacaattatc gcctgctttg ctgtgatagt gtcagccaaa agggctgtag
      541 aacgacatga atccttaaca agttggaact tggcaaagaa agctaagtgg cgtgaagaag
      601 ctgcattggc tgcacaggct aaagctaaat gatattctaa gtgacaaagt gttcacctga
      661 ataccatccc tgtcatcagc aacagtagaa gatgggaaaa atagaatatt taccaaaata
      721 tctgccatgg ttttattttg gtaacaagaa gcacaatgtc ttttttattt ttatttttta
      781 gtaaactttt actgaagtat accatgcatt caaaaagtgg acaaaactgt atacagtctg
      841 atagatattt atgtcgtgaa cacctgtgta accactgcca aagtgaagat gtagaatatt
      901 ggcaacactt cacagcctca ttcctgcctt ttctcagcca ttacctccca aacatagcag
      961 tttttctgag tttcatcacc tttgattcat tttgcctgtt tttgaacttt atataaatgg
     1021 atttatacat ta
//
