LOCUS       NM_001413826            2176 bp    mRNA    linear   PRI 14-JUN-2024
DEFINITION  Homo sapiens family with sequence similarity 153 member A
            (FAM153A), transcript variant 5, mRNA.
ACCESSION   NM_001413826
VERSION     NM_001413826.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Scanlan,M.J., Gordan,J.D., Williamson,B., Stockert,E., Bander,N.H.,
            Jongeneel,V., Gure,A.O., Jager,D., Jager,E., Knuth,A., Chen,Y.T.
            and Old,L.J.
  TITLE     Antigens recognized by autologous antibody in patients with
            renal-cell carcinoma
  JOURNAL   Int J Cancer 83 (4), 456-464 (1999)
   PUBMED   10508479
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC140125.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660807.139910.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1965299,
                                           SAMEA1966682 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000697116.2/ ENSP00000513119.1
            RefSeq Select criteria :: based on manual assertion
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-157               AC140125.3         82566-82722
            158-213             AC140125.3         84961-85016
            214-244             AC140125.3         98285-98315
            245-438             AC140125.3         101955-102148
            439-497             AC140125.3         116766-116824
            498-522             AC140125.3         117672-117696
            523-602             AC140125.3         120498-120577
            603-627             AC140125.3         121047-121071
            628-704             AC140125.3         124133-124209
            705-729             AC140125.3         124664-124688
            730-800             AC140125.3         125795-125865
            801-825             AC140125.3         126328-126352
            826-896             AC140125.3         128353-128423
            897-927             AC140125.3         128856-128886
            928-998             AC140125.3         130532-130602
            999-1023            AC140125.3         131061-131085
            1024-1094           AC140125.3         133365-133435
            1095-1125           AC140125.3         133866-133896
            1126-1196           AC140125.3         135910-135980
            1197-1227           AC140125.3         136412-136442
            1228-1265           AC140125.3         140644-140681
            1266-1333           AC140125.3         141103-141170
            1334-2176           AC140125.3         141259-142101
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="5"
                     /map="5q35.3"
     gene            1..2176
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /note="family with sequence similarity 153 member A"
                     /db_xref="GeneID:285596"
                     /db_xref="HGNC:HGNC:29940"
     exon            1..157
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            158..213
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            214..244
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            245..438
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            439..497
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     CDS             495..1427
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /note="isoform 1 is encoded by transcript variant 5; NY
                     REN 7 antigen; renal carcinoma antigen NY-REN-7; protein
                     FAM153A"
                     /codon_start=1
                     /product="protein FAM153A isoform 1"
                     /protein_id="NP_001400755.1"
                     /db_xref="GeneID:285596"
                     /db_xref="HGNC:HGNC:29940"
                     /translation="MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQC
                     ERDEGSLGKPLCPPEILSETLPGSVKKRVCFPSEDHLEEFIAEHLPEASNQSLLTVAH
                     ADAGTQTNGDLEDLEEHGPGQTVSEEATEVHTMEGDPDTLAEFLIRDVLQELSSYNGE
                     EEDPEEVKTSLGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQVDPATLAKSDLEDLEE
                     HVPEQTVSEEATGVHMMQVDPATLAKQLEDSTITGSHQQMSASPSSAPAEEATEKTKV
                     EEEVKTRKPKKKTRKPSKKSRWNVLKCWDIFNIF"
     exon            498..522
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            523..602
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            603..627
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            628..704
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            705..729
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            730..800
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            801..825
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            826..896
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            897..927
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            928..998
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            999..1023
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            1024..1094
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            1095..1125
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            1126..1196
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            1197..1227
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            1228..1265
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            1266..1333
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
     exon            1334..2176
                     /gene="FAM153A"
                     /gene_synonym="NY-REN-7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggagaacccg cgagcccagc ggcgcctgca cctgcggctt ccgggagccg ggcggctttg
       61 cgaggctcac taggtctgag aggtcggagg ccgccagtgt cgctgctgaa gggtggacca
      121 ggcgggatcg cggattctgg gctagatcgc agacttgaat tcgacaccaa attttggaac
      181 ttaaaaagaa gattcttaaa acttacaatc cagattctgg gagttctgat gaatatgcag
      241 tcagcccagg gcttcccagc tgtcttcatc caggcctgcg ccggtgttca cagtggtcct
      301 catctaagcc agccaagaag atctctgtca tccacgtgac agccagccca gatgtcccta
      361 gccgtcctca tcaaggccag ccagtttgct tacacgtgtg ctaattggag ccagccaccc
      421 tcatagaggc catcccagat tacgatgagg acctggtgca ggaagcttca tctgaagatg
      481 tcctgggcgt tcatatggtg gacaaagaca cagagagaga cattgagatg aaacggcaac
      541 tacggcgact acgggagctc cacctataca gcacatggaa gaagtaccaa gaggcgatga
      601 agacatcctt gggagttcca caatgtgagc gtgacgaagg ctccttgggc aagccattgt
      661 gtccacccga gatactctcg gagacgttgc caggctctgt gaagaaaagg gtatgctttc
      721 catcagaaga tcatctagag gagtttatag cagaacatct ccctgaagca tccaatcaga
      781 gtctcctcac tgttgcccat gcagacgcag gcacccaaac caacggtgac ctggaagacc
      841 tggaggagca tgggccaggg cagacagtct ctgaggaagc cacagaagtt cacacgatgg
      901 agggggaccc agacacactg gccgaatttc tgatcaggga tgtacttcag gagctgtcca
      961 gttacaacgg tgaggaggag gacccagagg aggtgaagac atccttggga gttccacaac
     1021 gtggtgacct ggaagacctg gaggagcatg tgccagggca gacagtctct gaggaagcca
     1081 caggggttca catgatgcag gtggacccag ccacgctggc aaagagtgac ctggaagacc
     1141 tggaggagca tgtgccagag cagacagtct ctgaggaagc cacaggggtt cacatgatgc
     1201 aggtggaccc agccacactg gcaaagcaat tggaagactc caccattaca ggcagccacc
     1261 agcagatgtc agcaagtcct tcctctgcac ctgcagaaga agcaacagaa aagaccaaag
     1321 tggaagagga agtgaaaacc agaaagccca agaagaaaac caggaagccc agcaagaaaa
     1381 gccggtggaa tgtcctgaaa tgttgggaca tttttaatat attttagaga cctctgaagg
     1441 caagtgaagg atgccctgag aacatgctcc aggaaacaga cacccactcc atagcagccc
     1501 ctgagcctgc tgggctgagc cctccacagg ctgcttagtg agggagacac tgaggtgctg
     1561 gtcgcacccc catgtgcagg actccaaggg ctttgcactg tgttgtctgc agtaactctt
     1621 cagctcacca acatctcatt tggggggacc tagctctgtc ttcccagccc cttgaggaca
     1681 acagggagca tcactagttc atcctgagga gacactaggg ttgacatgaa tccccctggt
     1741 tcaggcctcc tgggaaaggt gtgagaggga tggaggcacc cccaggctcc ttgtcacaca
     1801 agcgagcagc ccacccgacc cagtattgca ggccagcagg ccctcagtag gtcctggtgt
     1861 caagcagggg acacggcagg atccaagaag cactgaaatg tgtccagtcc caggagtcct
     1921 tcagcctctg gggggtctgg gggcctccag ttccaggggt ccttcagcct ctgtgggggc
     1981 ctggggtggc ctcatggccc cctttttcaa gatgaggttg gaggcttctg tatgtagagg
     2041 gcactggctt gggccaaatg ccaacaaaac aaacccttga agacatttca gggccatgct
     2101 cacttgggag ggtttgagga catgatttag cgagcctctg ttttttaaat atattttcca
     2161 atcttgaaat aaggta
//
