LOCUS       NM_001080526             585 bp    mRNA    linear   PRI 20-JUN-2024
DEFINITION  Homo sapiens fatty acid binding protein 9 (FABP9), mRNA.
ACCESSION   NM_001080526 XM_929401
VERSION     NM_001080526.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 585)
  AUTHORS   Al Fayi,M.S., Gou,X., Forootan,S.S., Al-Jameel,W., Bao,Z.,
            Rudland,P.R., Cornford,P.A., Hussain,S.A. and Ke,Y.
  TITLE     The increased expression of fatty acid-binding protein 9 in
            prostate cancer and its prognostic significance
  JOURNAL   Oncotarget 7 (50), 82783-82797 (2016)
   PUBMED   27779102
  REMARK    GeneRIF: FABP9 is a valuable prognostic marker to predict the
            outcomes of prostate cancer patients, perhaps by playing an
            important role in prostate cancer cell invasion.
REFERENCE   2  (bases 1 to 585)
  AUTHORS   Oko,R. and Morales,C.R.
  TITLE     A novel testicular protein, with sequence similarities to a family
            of lipid binding proteins, is a major component of the rat sperm
            perinuclear theca
  JOURNAL   Dev Biol 166 (1), 235-245 (1994)
   PUBMED   7958448
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from AC018616.5.
            
            On Jul 25, 2019 this sequence version replaced NM_001080526.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA1968832, SAMEA1968968
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            MANE Ensembl match               :: ENST00000379071.4/
                                                ENSP00000368362.2
            RefSeq Select criteria           :: based on single protein-coding
                                                transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-129               AC018616.5         45613-45741
            130-302             AC018616.5         47855-48027
            303-404             AC018616.5         48489-48590
            405-585             AC018616.5         48759-48939
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="8"
                     /map="8q21.13"
     gene            1..585
                     /gene="FABP9"
                     /gene_synonym="PERF; PERF15; T-FABP; TLBP"
                     /note="fatty acid binding protein 9"
                     /db_xref="GeneID:646480"
                     /db_xref="HGNC:HGNC:3563"
                     /db_xref="MIM:620856"
     exon            1..129
                     /gene="FABP9"
                     /gene_synonym="PERF; PERF15; T-FABP; TLBP"
                     /inference="alignment:Splign:2.1.0"
     CDS             57..455
                     /gene="FABP9"
                     /gene_synonym="PERF; PERF15; T-FABP; TLBP"
                     /note="testis lipid binding protein; fatty acid binding
                     protein 9, testis; testis-type fatty acid-binding protein"
                     /codon_start=1
                     /product="fatty acid-binding protein 9"
                     /protein_id="NP_001073995.1"
                     /db_xref="GeneID:646480"
                     /db_xref="HGNC:HGNC:3563"
                     /db_xref="MIM:620856"
                     /translation="MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTIS
                     VDGKMMTIRTESSFQDTKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKE
                     TTIKRKIVDEKMVVECKMNNIVSTRIYEKV"
     exon            130..302
                     /gene="FABP9"
                     /gene_synonym="PERF; PERF15; T-FABP; TLBP"
                     /inference="alignment:Splign:2.1.0"
     exon            303..404
                     /gene="FABP9"
                     /gene_synonym="PERF; PERF15; T-FABP; TLBP"
                     /inference="alignment:Splign:2.1.0"
     exon            405..585
                     /gene="FABP9"
                     /gene_synonym="PERF; PERF15; T-FABP; TLBP"
                     /inference="alignment:Splign:2.1.0"
     regulatory      566..571
                     /regulatory_class="polyA_signal_sequence"
                     /gene="FABP9"
                     /gene_synonym="PERF; PERF15; T-FABP; TLBP"
                     /note="hexamer: AATAAA"
     polyA_site      585
                     /gene="FABP9"
                     /gene_synonym="PERF; PERF15; T-FABP; TLBP"
                     /note="major polyA site"
ORIGIN      
        1 gcctatattt ctttggtttt caattacgag tggctcttct cagcaagtgt tccatgatgg
       61 ttgagccctt cttgggaacc tggaagctgg tctccagtga aaactttgag gattacatga
      121 aagaactggg agtgaatttc gcagcccgga acatggcagg gttagtgaaa ccgacagtaa
      181 ctattagtgt tgatgggaaa atgatgacca taagaacaga aagttctttc caggacacta
      241 agatctcctt caagctgggg gaagaatttg atgaaactac agcagacaac cggaaagtaa
      301 agagcaccat aacattagag aatggctcaa tgattcacgt ccaaaaatgg cttggcaaag
      361 agacaacaat caaaagaaaa attgtggatg aaaaaatggt agtggaatgt aaaatgaata
      421 atattgtcag caccagaatc tacgaaaagg tgtgaagaaa ggtccacagc aatgaaaact
      481 tgttcactga caaggaactg gtacctgaag aagatatgcc tcagggctgg tgatttttaa
      541 aaaatgtctc aatataaatt tgcttaataa aagcatcaaa ttaag
//
