LOCUS       XM_011531085            3272 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens endogenous retrovirus group FC1 Env
            polyprotein (ERVFC1), mRNA.
ACCESSION   XM_011531085
VERSION     XM_011531085.3
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000023.11) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011531085.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3272
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
     gene            1..3272
                     /gene="ERVFC1"
                     /note="endogenous retrovirus group FC1 Env polyprotein;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 long SRA read, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     2 samples with support for all annotated introns"
                     /db_xref="GeneID:105373297"
     CDS             1154..2908
                     /gene="ERVFC1"
                     /codon_start=1
                     /product="endogenous retrovirus group FC1 Env polyprotein"
                     /protein_id="XP_011529387.1"
                     /db_xref="GeneID:105373297"
                     /translation="MARPSPLCLLLLLTLLTPIVPSNSLLTEPPFRWRFYLHETWTQG
                     NRLSTVTLATVDCQPHGCQAQVTFNFTSFKSVLRGWSNPTICFVYDQTHSNCRDYWVD
                     TNGGCPYAYCRMHVTQLHTAKKLQHTYRLTSDGRTTYFLTIPDPWDSRWVSGVTGRLY
                     RWPTDSYPVGKLRIFLTYIRVIPQVLSNLKDQADNIKHQEEVINTLVQSHPKADMVTY
                     DDKAEAGPFSWITLVRHGARLVNMAGLVNLSHCFLCTALSQPPLVAVPLPQAFNTSGN
                     HTAHPSGVFSEQVPLFRDPLQPQFPFCYTTPNSSWCNQTYSGSLSNLSAPAGGYFWCN
                     FTLTKHLNISSNNTLSRNLCLPISLVPRLTLYSEAELSSLVNPPMRQKRAVFPPLVIG
                     VSLTSSLVASGLGTGAIVHFISSSQDLSIKLQMAIEASAESLASLQRQITSVAKVAMQ
                     NRRALDLLTADKGGTCMFLGEECCYYINESGLVETSLLTLDKIRDGLHRPSSTPNYGG
                     GWWQSPLTTWIIPFISPILIICLLLLIAPCVLKFIKNRISEVSRVTVNQMLLHPYSRL
                     PTSEDHYDDALTQQEAAR"
ORIGIN      
        1 ccagtgaacc tcgcccgaga gctccattaa taaagcaggt cgcctctgac cattagtcac
       61 ctaaattctg tgcggtagtt ctcattggat acctgtcttc ccaagccgga cattggtgcc
      121 aaaacccggg aggagacccc tctctgaccc agggtcgggg agcatctcct ctccctacct
      181 gccaggaacc agactcgggc cagcgcattc ggcctttgct attggatggg acattggaag
      241 tctgagtgcc ccagcgtcgg agcgtccaca gtgcctctac gctgtgaaaa ctccgagacg
      301 accggtggcg ccttccaatt actcagcatg gacgacgact gaagaggccc agactcggga
      361 acccccctca ctcttgccga gcccagggta acgctccagg tagcagatac cttcacaggc
      421 tggattgagg cctttcccac tgcacgtgag acaggagaag tcgcagtctc tgtcctgcta
      481 gaacatatca tccctcgctt tggacttccc cgatccctgc aatcagacaa cggccccgcg
      541 ttcgtctcaa aaatcactca gcaagtatcc gagtcgctcc gcgtcacatg gaagctccat
      601 atcccttacc gccctcaatc ctctggtaaa gtagaaaggg ctaacagcct cctcaaagaa
      661 caccttacaa aacttactct tgaaacaaag ctgtcgtggg tcaccctcct accattggcc
      721 ctgacccgcc tccgggcagc tcccaggggc cccacagggc tcagcccctt cgaacttctc
      781 tacggacgcc ccttcctact tcctggtctt ccccccactg tttcgccccc tcccctcgcg
      841 tcctatcttc cttatctgac cctccttcgc gaccttctcc gcaagcacgc ggacgcctgc
      901 ctccccgaac ctaccccctc ctccccggac gcccctgttg tgctctctcc aggtgatagt
      961 gtcctcctta aggaactaca gtccaagacc ttgaccccgc ggtggtcagg cccttacacc
     1021 gtgatcctca ccactccgag ggccactaag ttactaggtc taccatcctg gtatcatttg
     1081 tcacagttga agaaagcacc gactcagcac gactggtcct caaaactcac cccaacccgg
     1141 cttcgtatca cccatggcca gaccttcccc actatgcctc ctactcctcc tgaccctcct
     1201 aacccccata gtgcccagta actccctcct aactgaaccc ccgttccgat ggaggttcta
     1261 cctgcatgag acttggaccc aaggcaaccg gctctccact gtcacactgg caacggtgga
     1321 ctgccaacct cacggttgtc aggcccaagt aacttttaac ttcacttcct ttaaaagtgt
     1381 tctgcggggc tggtccaatc ccaccatctg ctttgtctat gatcaaacac acagcaactg
     1441 ccgcgactat tgggtggaca caaacggagg atgcccctat gcctattgtc gtatgcatgt
     1501 gacccagctc cataccgcca agaaactcca acacacctat cgcctgacat ctgatggaag
     1561 gacaacttac ttcctgacca tcccagaccc atgggattct cggtgggtca gtggagtcac
     1621 tggtcgactg taccggtggc ccaccgactc ctacccagtt ggcaaactcc ggatattcct
     1681 gacttatata cgagttatcc cccaggtttt gtctaattta aaggaccaag cagacaacat
     1741 taagcatcag gaagaggtca tcaatacttt ggtgcagtcc catccgaagg ctgacatggt
     1801 cacctatgat gacaaggctg aggcaggacc gttttcatgg ataaccctag tccgccacgg
     1861 ggctcgcctt gttaatatgg caggcctagt taatctctcc cactgtttcc tttgcaccgc
     1921 cctcagccaa ccaccactag tagctgtacc cctaccccag gcttttaaca cctctggtaa
     1981 ccacactgcc cacccttccg gcgtcttctc tgagcaggtc cctcttttcc gagaccccct
     2041 ccagccccag ttccccttct gctacaccac tcctaactca tcctggtgca accagaccta
     2101 ttctggctcc ctatctaacc tctctgcacc ggcaggtggc tacttctggt gtaacttcac
     2161 ccttacaaaa catcttaata tttcctctaa caataccctt tctagaaact tatgcctccc
     2221 catctctctg gtgcctcgac tcactctgta cagcgaggct gaactctctt cccttgtcaa
     2281 cccgcctatg cgtcagaagc gggccgtttt cccaccgctg gtaataggtg tctccttgac
     2341 ctcctcactt gttgcctccg ggctgggcac aggtgctatt gtacatttca taagctcttc
     2401 ccaagatctc tctattaagc tccagatggc catcgaagcc tcagccgaat ccttagcctc
     2461 tctacagaga cagattacgt ctgtggccaa ggtggccatg cagaaccgga gagccctaga
     2521 tctcctcaca gccgacaaag gcggaacctg catgtttctc ggggaagagt gctgttatta
     2581 catcaatgaa tcaggcttag tagaaaccag cctcctcacc cttgataaaa tccgggacgg
     2641 tctccatcga ccctcctcaa ctcccaacta tggaggaggg tggtggcaat cccctttaac
     2701 cacttggatt atccctttca taagccccat cctaatcatt tgccttttac ttctcatagc
     2761 cccctgtgtc ctcaagttca tcaaaaaccg catcagcgaa gtctcccggg tgacggtcaa
     2821 ccaaatgtta ctacaccctt actcccgtct tccgacctcc gaagaccact atgacgacgc
     2881 cctcactcag caggaagcag ccagatgatt acgtcgcccc tttttcttac agtatgaggt
     2941 cggaatgtta ggcaggtcac ccaagatggc tgttccccca ggacccaaga tggcggcacg
     3001 aaccccttct tccccgcccc ccccaccgct tggagtctcc caccagattt tcccgcccga
     3061 cgggcacttt ccgatgacag cagccccgag aagtcgaaac ctatcccaga aaaccgaaac
     3121 ttactaagcc cctccccaca cgctctataa aaaccctcta ctgccccagt cgggtgcgac
     3181 ttccctggcc ctccttgtta ggaccagtga acctcgcccg agagctccat taataaagca
     3241 ggtcgcctct gaccattagt tacctaaatt ct
//
