LOCUS       XM_047416892            2236 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens EBF transcription factor 1 (EBF1),
            transcript variant X13, mRNA.
ACCESSION   XM_047416892
VERSION     XM_047416892.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000005.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="5"
     gene            1..2236
                     /gene="EBF1"
                     /gene_synonym="COE1; EBF; O/E-1; OLF1"
                     /note="EBF transcription factor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 2 ESTs, 19 long SRA reads, and 97% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     2 samples with support for all annotated introns"
                     /db_xref="GeneID:1879"
                     /db_xref="HGNC:HGNC:3126"
                     /db_xref="MIM:164343"
     CDS             713..1657
                     /gene="EBF1"
                     /gene_synonym="COE1; EBF; O/E-1; OLF1"
                     /codon_start=1
                     /product="transcription factor COE1 isoform X11"
                     /protein_id="XP_047272848.1"
                     /db_xref="GeneID:1879"
                     /db_xref="HGNC:HGNC:3126"
                     /db_xref="MIM:164343"
                     /translation="MFWGKRSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPV
                     EIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGIRTEQDFYVRLIDSMTKQAIV
                     YEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNC
                     LKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCI
                     KAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVWSELITPHAIRVQTPPRHIPGV
                     VEVTLSYKSKQFCKGTPGRFIYTGPWNKRLMPGDNKGE"
     polyA_site      2236
                     /gene="EBF1"
                     /gene_synonym="COE1; EBF; O/E-1; OLF1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtgttcttct atgtgtgtgt gtgtgcctgt gcgcgcttgt gttgggcagg tccggctgtc
       61 agtggccgcc tggcgcccca ggcgctccag cctcccatcg ccggccggcg cactgagcca
      121 gcagccctgg cctttaggat ttctggaatg agtgtgagga tttctgcgga acagcgaaac
      181 tttgttagga caggtcttta agaaaacacc cctcttccct ttttcacagc gaccacccgc
      241 gacagttctg agccccgccc tcggaccctt ctccacatgc tttttggtgg tggggggatg
      301 tggcttccca aggccgggca ctcgcagttg gccagagctt gaggggttcc tggagggtgg
      361 ctgctgcggc gagacgccga gcatgttttc catccattcc cacctgccct gctagctgag
      421 acgtgagatt cgaggggtgc cggaatataa ctgtgggttc tactccgcga aggtgggttc
      481 acttcatcca ccgccacttt tcttcctccc cacgcagtgc gtgtcaggta ggagtaaatg
      541 cttatagagt ttcatctcgc gcgcaaaacc caaacaaaac tttcacacct cttcagcgag
      601 ttctgaggac gcacccgtcc ttggcggaga ggacgaggac atgaggggac atgtgtgtcc
      661 cgttgtcagc tgggtctatg tcgcctgaag gggcgtgaag agcgcccact ggatgttttg
      721 ggggaagagg agcggggtgg gtctggcccg ggctcacttt gagaagcagc cgccttccaa
      781 tctgcggaaa tccaacttct tccacttcgt cctggccctc tacgacagac agggccagcc
      841 cgtggagatc gagaggacag cgtttgtggg gttcgtggag aaggaaaaag aagccaacag
      901 cgaaaagacc aataacggaa ttcactaccg gcttcagctt ctctacagca atgggataag
      961 gacggagcag gatttctacg tgcgcctcat tgactccatg acaaaacaag ccatagtgta
     1021 tgaaggccaa gacaagaacc cagaaatgtg ccgagtcttg ctcacacatg agatcatgtg
     1081 cagccgctgt tgtgacaaga aaagctgtgg caaccgaaat gagactccct cagatccagt
     1141 gataattgac aggttcttct tgaaattttt cctcaaatgt aaccaaaatt gcctaaagaa
     1201 tgcgggaaac ccacgtgaca tgcggagatt ccaggtcgtg gtgtctacga cagtcaatgt
     1261 ggatggccat gtcctggcag tctctgataa catgtttgtc cataataatt ccaagcatgg
     1321 gcggagggct cggaggcttg acccctcgga agctactccc tgtatcaaag ccatcagccc
     1381 gagtgaagga tggacgacgg gaggtgcgac tgtgatcatc ataggggaca atttctttga
     1441 tgggttacag gtcatattcg gtaccatgct ggtctggagt gagttgatca ctcctcatgc
     1501 catccgtgtg cagacccctc ctcggcacat ccctggtgtt gtggaagtca cactgtccta
     1561 caaatctaag cagttctgca aaggaacacc aggcagattc atttatacag gtccatggaa
     1621 caagaggctc atgcctggtg acaataaagg cgaatagagg gggaaggatg gagaagcaga
     1681 aagaataaga catctaacta tcaagactaa ctcccaaaat agctttcaat aaactgcaaa
     1741 gcacacccct ccttctttat ccacatagta agattgaaag tcgtcactga gtcttaaact
     1801 gtgaatattg aaattgtgag atgtatggta catttaatgg agacgttggt gaagtgcaca
     1861 agtcatttta actttgtctt ttaattttca agatttattg gttccaaggg aagagaatat
     1921 ttataagcgt tttaggtatt cacaaaacat gtagttgcca aacagtgcaa agaatgaaaa
     1981 gaaatcatca ttatgaagct ggatgattca ggaaatgtgg tgataaatat gggagtgaca
     2041 acatattatc tcagcctttt ctagctccac atttttgagt catgattatc aagtgtatca
     2101 ctgcagggag tatgctaagt cagtttggag ctagaggaat tttagtttta aaagaataac
     2161 cacgccatgt ttgggaagta caaatacagt aaatgatgtc acgtcatctc agtttgaata
     2221 aatatatatt gtataa
//
