LOCUS       XM_047416888            2387 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens EBF transcription factor 1 (EBF1),
            transcript variant X3, mRNA.
ACCESSION   XM_047416888
VERSION     XM_047416888.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000005.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="5"
     gene            1..2387
                     /gene="EBF1"
                     /gene_synonym="COE1; EBF; O/E-1; OLF1"
                     /note="EBF transcription factor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 3 ESTs, 28 long SRA reads, 1 Protein, and 97%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:1879"
                     /db_xref="HGNC:HGNC:3126"
                     /db_xref="MIM:164343"
     CDS             713..2386
                     /gene="EBF1"
                     /gene_synonym="COE1; EBF; O/E-1; OLF1"
                     /codon_start=1
                     /product="transcription factor COE1 isoform X3"
                     /protein_id="XP_047272844.1"
                     /db_xref="GeneID:1879"
                     /db_xref="HGNC:HGNC:3126"
                     /db_xref="MIM:164343"
                     /translation="MFWGKRSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPV
                     EIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGIRTEQDFYVRLIDSMTKQAIV
                     YEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNC
                     LKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEATPCI
                     KAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVWSELITPHAIRVQTPPRHIPGV
                     VEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVILK
                     RAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQLPALANTSVHAGMMGVNS
                     FSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQTNYNSVTTSMNGYGSAAM
                     SNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGIFSFSPANMVSAVKQ
                     KSAFAPVVRPQTSPPPTCTSTNGNSLQDQSFVDSSKFSSAGSLPGLAFS"
ORIGIN      
        1 gtgttcttct atgtgtgtgt gtgtgcctgt gcgcgcttgt gttgggcagg tccggctgtc
       61 agtggccgcc tggcgcccca ggcgctccag cctcccatcg ccggccggcg cactgagcca
      121 gcagccctgg cctttaggat ttctggaatg agtgtgagga tttctgcgga acagcgaaac
      181 tttgttagga caggtcttta agaaaacacc cctcttccct ttttcacagc gaccacccgc
      241 gacagttctg agccccgccc tcggaccctt ctccacatgc tttttggtgg tggggggatg
      301 tggcttccca aggccgggca ctcgcagttg gccagagctt gaggggttcc tggagggtgg
      361 ctgctgcggc gagacgccga gcatgttttc catccattcc cacctgccct gctagctgag
      421 acgtgagatt cgaggggtgc cggaatataa ctgtgggttc tactccgcga aggtgggttc
      481 acttcatcca ccgccacttt tcttcctccc cacgcagtgc gtgtcaggta ggagtaaatg
      541 cttatagagt ttcatctcgc gcgcaaaacc caaacaaaac tttcacacct cttcagcgag
      601 ttctgaggac gcacccgtcc ttggcggaga ggacgaggac atgaggggac atgtgtgtcc
      661 cgttgtcagc tgggtctatg tcgcctgaag gggcgtgaag agcgcccact ggatgttttg
      721 ggggaagagg agcggggtgg gtctggcccg ggctcacttt gagaagcagc cgccttccaa
      781 tctgcggaaa tccaacttct tccacttcgt cctggccctc tacgacagac agggccagcc
      841 cgtggagatc gagaggacag cgtttgtggg gttcgtggag aaggaaaaag aagccaacag
      901 cgaaaagacc aataacggaa ttcactaccg gcttcagctt ctctacagca atgggataag
      961 gacggagcag gatttctacg tgcgcctcat tgactccatg acaaaacaag ccatagtgta
     1021 tgaaggccaa gacaagaacc cagaaatgtg ccgagtcttg ctcacacatg agatcatgtg
     1081 cagccgctgt tgtgacaaga aaagctgtgg caaccgaaat gagactccct cagatccagt
     1141 gataattgac aggttcttct tgaaattttt cctcaaatgt aaccaaaatt gcctaaagaa
     1201 tgcgggaaac ccacgtgaca tgcggagatt ccaggtcgtg gtgtctacga cagtcaatgt
     1261 ggatggccat gtcctggcag tctctgataa catgtttgtc cataataatt ccaagcatgg
     1321 gcggagggct cggaggcttg acccctcgga agctactccc tgtatcaaag ccatcagccc
     1381 gagtgaagga tggacgacgg gaggtgcgac tgtgatcatc ataggggaca atttctttga
     1441 tgggttacag gtcatattcg gtaccatgct ggtctggagt gagttgatca ctcctcatgc
     1501 catccgtgtg cagacccctc ctcggcacat ccctggtgtt gtggaagtca cactgtccta
     1561 caaatctaag cagttctgca aaggaacacc aggcagattc atttatacag cgctcaacga
     1621 acccaccatc gattatggtt tccagaggtt acagaaggtc attcctcggc accctggtga
     1681 ccctgagcgt ttgccaaagg aagtaatact caaaagggct gcggatctgg tagaagcact
     1741 gtatgggatg ccacacaaca accaggaaat cattctgaag agagcggccg acattgccga
     1801 ggccctgtac agtgttcccc gcaaccacaa ccaactcccg gcccttgcta acacctcggt
     1861 ccacgcaggg atgatgggcg tgaattcgtt cagtggacaa ctggccgtga atgtctccga
     1921 ggcatcacaa gccaccaatc agggtttcac ccgcaactca agcagcgtat caccacacgg
     1981 gtacgtgccg agcaccactc cccagcagac caactataac tccgtcacca cgagcatgaa
     2041 cggatacggc tctgccgcaa tgtccaattt gggcggctcc cccaccttcc tcaacggctc
     2101 agctgccaac tccccctatg ccatagtgcc atccagcccc accatggcct cctccacaag
     2161 cctcccctcc aactgcagca gctcctcggg catcttctcc ttctcaccag ccaacatggt
     2221 ctcagccgtg aaacagaaga gtgctttcgc accagtcgtc agaccccaga cctccccacc
     2281 tcccacctgc accagcacca acgggaacag cctgcaagat cagtcttttg tggactctag
     2341 caagttctcc agtgcagggt ctctcccggg actggccttc tcctgaa
//
