LOCUS       XM_011542918            6712 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens DS cell adhesion molecule like 1 (DSCAML1),
            transcript variant X2, mRNA.
ACCESSION   XM_011542918
VERSION     XM_011542918.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000011.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011542918.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6712
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="11"
     gene            1..6712
                     /gene="DSCAML1"
                     /gene_synonym="DSCAM2"
                     /note="DS cell adhesion molecule like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 25 ESTs, 16 long SRA reads, 3 Proteins, and
                     98% coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:57453"
                     /db_xref="HGNC:HGNC:14656"
                     /db_xref="MIM:611782"
     CDS             223..6156
                     /gene="DSCAML1"
                     /gene_synonym="DSCAM2"
                     /codon_start=1
                     /product="cell adhesion molecule DSCAML1 isoform X2"
                     /protein_id="XP_011541220.1"
                     /db_xref="GeneID:57453"
                     /db_xref="HGNC:HGNC:14656"
                     /db_xref="MIM:611782"
                     /translation="MTPCSSFIHDNDYFCTAENAAGKIRSPNIRVKAVFREPYTVRVE
                     DQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPEHRFFITYHGGLYISDVQKE
                     DALSTYRCITKHKYSGETRQSNGARLSVTGLARAADPLCLPDPAESIPTILDGFHSQE
                     VWAGHTVELPCTASGYPIPAIRWLKDGRPLPADSRWTKRITGLTISDLRTEDSGTYIC
                     EVTNTFGSAEATGILMVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNT
                     ELVLPDEAISIRGLSNETLLITSAQKSHSGAYQCFATRKAQTAQDFAIIALEDGTPRI
                     VSSFSEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPIVRDGSHRTNQYTMSDGTTIS
                     HMNVTGPQIRDGGVYRCTARNLVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINC
                     RVIGYPYYSIKWYKDALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLS
                     ISQSVHVAVKVPPLIQPFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSG
                     VTIESKEFMSSLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQD
                     GIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVL
                     EEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPNTTIAIKGHAKELNCTARGER
                     PIIIRWEKGDTVIDPDRVMRYAIATKDNGDEVVSTLKLKPADRGDSVFFSCHAINSYG
                     EDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWD
                     FKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPP
                     MDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDS
                     EVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRALSITSDV
                     AVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQNITTTRERVELRGMEKFTNYS
                     VQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPSSASSVVVSWLPPTKPNGVIR
                     KYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNSSEKV
                     TIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPAVKWTKDSEDSAIPVSMDG
                     HRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQVPPDQPRLTVSKTSA
                     SSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKLDSLKCGTWYKVK
                     LAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWNNGGCPITA
                     IVLEYRPKGTWAWQGLRANSSGEVFLTELREATWYELRMRACNSAGCGNETAQFATLD
                     YDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKRLKRLRDAK
                     SLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTD
                     AEFSQAVNPQSFCTGVSLHHPTLIQSTGPLIDMSDIRPGTNPVSRKNVKSAHSTRNRY
                     SSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTE
                     SASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMST
                     PSEPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYAKSEAFFRKADGRE
                     PCPVVPPREASIRNLARTYHTQARHLTLDPASKSLGLPHPGAPAAASTATLPQRTLAM
                     PAPPAGTAPPAPGPTPAEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSG
                     VGRSQKQGAGAYSKSYTLV"
ORIGIN      
        1 agccgagcgc tgggctgagg agcagagaga gcggggcgcc gagtgcgggc ggctgggagc
       61 gcgctgagcg ggggagaggc gctgccgcac ggccggccac aggaccacct ccccggagaa
      121 tagggcctct ttatggcatg tggctggtaa ctttcctcct gctcctggac tctttacaca
      181 aagcccgccc tgaagatgtt ggcaccagcc tctactttgt aaatgactcc ttgcagcagc
      241 tttatccacg acaatgacta cttctgcacc gcggagaacg ctgccggcaa gatccggagc
      301 cccaacatcc gcgtcaaagc agttttcagg gaaccctaca ccgtccgggt ggaggatcaa
      361 aggtcaatgc gtggcaacgt ggccgtcttc aagtgcctca tcccctcttc agtgcaggaa
      421 tatgttagcg ttgtatcttg ggagaaagac acagtctcca tcatcccaga acacaggttt
      481 tttattacct accacggcgg gctgtacatc tctgacgtac agaaggagga cgccctctcc
      541 acctatcgct gcatcaccaa gcacaagtat agcggggaga cccggcagag caatggggca
      601 cgcctctctg tgacagggct ggccagggct gccgaccctc tctgccttcc agaccctgct
      661 gagtcgatcc ccaccatcct ggatggcttc cactcccagg aagtgtgggc cggccacacc
      721 gtggagctgc cctgcaccgc ctcgggctac cctatccccg ccatccgctg gctcaaggat
      781 ggccggcccc tcccggctga cagccgctgg accaagcgca tcacagggct gaccatcagc
      841 gacttgcgga ccgaggacag cggcacctac atttgtgagg tcaccaacac cttcggttcg
      901 gcagaggcca caggcatcct catggtcatt gatccccttc atgtgaccct gacaccaaag
      961 aagctgaaga ccggcattgg cagcacggtc atcctctcct gtgccctgac gggctcccca
     1021 gagttcacca tccgctggta tcgcaacacg gagctggtgc tgcctgacga ggccatctcc
     1081 atccgcgggc tcagcaacga gacgctgctc atcacctcgg cccagaagag ccattccggg
     1141 gcctaccagt gcttcgctac ccgcaaggcc cagaccgccc aggactttgc catcattgca
     1201 cttgaggatg gcacgccccg catcgtctcg tccttcagcg agaaggtggt caaccccggg
     1261 gagcagttct cactgatgtg tgcggccaag ggcgccccgc cccccacggt cacctgggcc
     1321 ctcgacgatg agcccatcgt gcgggatggc agccaccgca ccaaccagta caccatgtcg
     1381 gacggcacca ccatcagcca catgaacgtc acaggccccc agatccgcga cgggggcgtg
     1441 taccggtgca cagcgcggaa cttggtgggc agtgctgaat atcaggcgcg aataaacgta
     1501 agaggcccac ccagcatccg ggctatgcgg aacatcacag cagtcgccgg gcgggacacc
     1561 cttatcaact gcagggtcat cggctatccc tactactcca tcaagtggta caaggatgcc
     1621 ctgctgctgc cagacaacca ccgccaggtg gtgtttgaga atgggaccct caagctgact
     1681 gacgtgcaga agggcatgga tgagggggag tacctgtgca gtgtcctcat ccagccccag
     1741 ctctccatca gccagagcgt tcacgtagcc gtcaaagtgc cccctctgat ccagcccttc
     1801 gaattcccac ccgcctccat cggccagctg ctctacattc cctgtgtggt gtcctcgggg
     1861 gacatgccca tccgtatcac ctggaggaag gacggacagg tgatcatctc aggctcgggc
     1921 gtgaccatcg agagcaagga attcatgagc tccctgcaga tctctagcgt ctccctcaag
     1981 cacaacggca actatacatg catcgccagc aacgcagccg ccaccgtgag ccgggagcgc
     2041 cagctcatcg tgcgtgtgcc ccctcgattt gtggtgcaac ccaacaacca ggatggcatc
     2101 tacggcaaag ctggtgtgct caactgctcg gtggacggct accccccacc caaggtcatg
     2161 tggaagcatg ccaaggggag cgggaacccc cagcagtacc accctgtgcc cctcactggc
     2221 cgcatccaga tcctgcccaa cagctcgctg ctgatccgcc acgtcctaga agaggacatc
     2281 ggctactacc tctgccaggc cagcaacggc gtaggcaccg acatcagcaa gtccatgttc
     2341 ctcacagtca agatcccggc catgatcact tcccacccca acaccaccat cgccatcaag
     2401 ggccatgcga aggagctaaa ctgcacggca cggggtgagc ggcccatcat catccgctgg
     2461 gagaaggggg acacagtcat cgaccctgac cgcgtcatgc ggtatgccat cgccaccaag
     2521 gacaacggcg acgaggtcgt ctccacactg aagctcaagc ccgctgaccg tggggactct
     2581 gtgttcttca gctgccatgc catcaactcg tatggggagg accggggctt gatccaactc
     2641 actgtgcaag agccccccga ccccccagag ctggagatcc gggaggtgaa ggcccggagc
     2701 atgaacctgc gctggaccca gcgattcgac gggaacagca tcatcacggg cttcgacatt
     2761 gaatacaaga acaaatcaga ttcctgggac ttcaagcagt ccacacgcaa catctccccc
     2821 accatcaacc aggccaacat tgtggacttg cacccggcat ctgtgtacag catccgcatg
     2881 tactctttca acaagattgg ccgcagtgaa ccaagcaagg agctcaccat cagcactgag
     2941 gaggccgctc ccgatgggcc ccccatggat gttaccttgc agccagtgac ctcacagagc
     3001 atccaggtga cctggaaggc acccaagaag gagctgcaga acggtgtcat ccggggctac
     3061 cagattggct acagagagaa cagccccggc agcaacgggc agtacagcat cgtggagatg
     3121 aaggccacgg gggacagcga ggtctacacc ctggacaacc tcaagaagtt cgcccagtat
     3181 ggggtggtgg tccaagcctt caatcgggct ggcacggggc cctcttccag cgagatcaat
     3241 gccaccactc tggaggatgt gcccagccag ccccctgaga acgtccgggc cctgtccatc
     3301 acttctgacg tggccgtcat ctcctggtca gagcccccgc gcagcaccct caatggcgtc
     3361 ctcaaaggct atcgggtcat cttctggtcc ctctatgttg atggggagtg gggcgagatg
     3421 cagaacatca ccaccacgcg ggagcgggtg gagctgcggg gcatggagaa gttcaccaac
     3481 tacagcgtcc aggtgctggc ctacacccag gctggggacg gcgtacgcag cagtgtgctc
     3541 tacatccaga ccaaggagga cgttccaggt ccccctgctg gcatcaaagc tgtcccttca
     3601 tcagctagca gtgtggttgt gtcttggctc ccccctacca agcccaacgg ggtgatccgc
     3661 aagtacacca tcttctgttc cagccccggg tctggccagc cggctcccag cgagtacgag
     3721 acgagtccag agcagctctt ctaccggatc gcccacctaa accgcggtca gcagtatctg
     3781 ctgtgggtgg ccgccgtcac ctctgccggc cggggcaaca gcagcgagaa ggtgaccatc
     3841 gagcctgctg gcaaggcccc agcaaagatc atctcctttg ggggcaccgt gacaacacct
     3901 tggatgaaag atgttcggct gccttgcaat tcagtgggag atccagcccc tgctgtgaag
     3961 tggaccaagg acagtgaaga ctcggccatt ccagtgtcca tggatgggca ccggctcatc
     4021 cacaccaatg gcacactgct gctgcgtgca gtgaaggctg aggactctgg ctactacacg
     4081 tgcacggcca ccaacactgg tggctttgac accatcatcg tcaaccttct ggtgcaagtt
     4141 cccccggacc agccccgcct cactgtctcc aaaacctcag cttcgtccat caccctgacc
     4201 tggattccag gtgacaatgg gggcagctcc atccgaggct tcgtgctaca gtactcggtg
     4261 gacaacagcg aggagtggaa ggatgtgttc atcagctcca gcgagcgctc cttcaagctg
     4321 gacagcctca agtgtggcac gtggtacaag gtgaagctgg cagccaagaa cagcgtgggc
     4381 tctgggcgca tcagcgagat catcgaggcc aagacccacg ggcgggagcc ctccttcagc
     4441 aaagaccaac acctcttcac ccacatcaac tccacgcatg ctcggcttaa cctgcagggc
     4501 tggaacaatg ggggctgccc tatcacagcc atcgttctgg agtaccggcc caaggggacc
     4561 tgggcctggc agggcctccg ggccaacagc tccggggagg tgtttctgac ggaactgcga
     4621 gaggccacgt ggtacgagct gcgcatgagg gcttgcaaca gtgcgggctg cggcaatgaa
     4681 acagcccagt tcgccaccct ggactacgat ggcagcacca ttccacccat caagtctgct
     4741 caaggtgaag gggatgatgt gaagaagctg ttcaccatcg gctgccctgt catcctggcc
     4801 acactggggg tggcactgct cttcatcgta cgcaagaaga ggaaggagaa acggctgaag
     4861 cgactccgag atgcaaagag tttggcagaa atgttgataa gcaagaacaa tagaagcttt
     4921 gacacccctg tgaaagggcc accccagggc ccacggctac acattgacat ccccagggtc
     4981 cagctgctca tcgaggacaa agaaggcatc aagcaactgg gagatgacaa ggccaccatc
     5041 cctgtgacag atgctgagtt cagccaagct gtcaacccac agagcttctg tactggcgtc
     5101 tccttgcacc acccaaccct catccagagc acaggacccc tcatcgacat gtctgacatc
     5161 cggccaggaa ccaatccagt gtccaggaag aatgtgaagt cagcccacag cacccggaac
     5221 cggtactcaa gccagtggac cctgaccaag tgccaggcct ccacacctgc ccgcaccctc
     5281 acctccgact ggcgcaccgt gggctcccag catggtgtca cggtcactga gagtgacagc
     5341 tacagtgcca gcctgtccca ggacacagac aaaggaagga acagcatggt gtccactgag
     5401 agtgcctctt ccacctacga ggagctggcc cgggcctatg agcatgccaa gctggaggag
     5461 cagctgcagc acgccaagtt tgagatcacc gagtgcttca tctctgacag ttcctctgac
     5521 cagatgacca caggcaccaa cgagaacgcc gacagcatga catccatgag cacaccctca
     5581 gagcctggca tctgccgctt taccgcctca ccacccaagc cccaggatgc ggaccggggc
     5641 aaaaacgtgg ctgtgcccat ccctcaccgg gccaacaaga gtgactactg caacctgccc
     5701 ctgtatgcca agtcagaggc cttctttcga aaggcagatg gacgtgagcc ctgccccgtg
     5761 gtcccacccc gtgaggcctc catccggaac ctggctcgaa cctaccacac ccaggctcgc
     5821 cacctgaccc tggaccctgc cagcaagtcc ttgggccttc cccacccagg ggcccccgct
     5881 gccgcctcca cagccacctt acctcagagg actctggcca tgccagcccc cccagccggc
     5941 acagcccccc cagcccccgg ccccacccct gctgagccac ccaccgcccc cagcgctgcc
     6001 cctccggccc ccagcaccga gcctccacga gccgggggcc cacacaccaa aatggggggc
     6061 tccagggact cgcttctcga gatgagcaca tcgggggtag ggaggtctca gaagcagggg
     6121 gccggggcct actccaaatc ctacaccctg gtgtagggcc cgcaggaaga gcagccacgc
     6181 ctggaccgcg ccgcgccgca gccccacacg ccagctcggc tgtttttctg cattatttat
     6241 attcaactga cagacaaaaa ccaaccaacg acaaaacaaa aacccccaat catgaacgcc
     6301 tgtacataga actcttttgt acaaatgaaa ctattttctt cttctccatg aagccagggc
     6361 acaaagaatt tgacagtaca agtcaaatcc cccaccccac aaaatatgtg tggagatata
     6421 tatacatata tagacagaca ggaacgcgtc cacgagctat atatctatat atttctctca
     6481 ccctattttg agacagaggc acaaagactc agcaattttt ttccctcctc ctcaccttcc
     6541 ccccagtcta ggtggttttg acaaagacca aaatcccaac tcagagacac tgcatgcgat
     6601 tttactgttc caagaaaacc aggagttgct tcaatttgca gatgcttatg tgttaatacc
     6661 tttttctatg aaaaaagacc cagcgccgtg tgcaataaag gttatgtttc ta
//
