LOCUS       NM_001282442            1185 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens DPEP2 neighbor (DPEP2NB), mRNA.
ACCESSION   NM_001282442
VERSION     NM_001282442.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX107720.1 and BU621438.1.
            
            On May 17, 2019 this sequence version replaced NM_001282442.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BX107720.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2142853
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000574912.1/ ENSP00000488973.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-538               BX107720.1         1-538
            539-1185            BU621438.1         18-664              c
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
                     /map="16q22.1"
     gene            1..1185
                     /gene="DPEP2NB"
                     /note="DPEP2 neighbor"
                     /db_xref="GeneID:100131303"
                     /db_xref="HGNC:HGNC:52385"
     exon            1..208
                     /gene="DPEP2NB"
                     /inference="alignment:Splign:2.1.0"
     CDS             142..513
                     /gene="DPEP2NB"
                     /note="CTC-479C5.6"
                     /codon_start=1
                     /product="DPEP2 neighbor protein"
                     /protein_id="NP_001269371.1"
                     /db_xref="CCDS:CCDS82001.1"
                     /db_xref="GeneID:100131303"
                     /db_xref="HGNC:HGNC:52385"
                     /translation="MTDRILYIVSNMSSVPWEGSAAAAVPATSPPTPGHYHVLYRGCG
                     ETQVGWHGETYCLVGGYRVHGDAPLATPTKAEAEKPAPRRAPKRRQATIESDKDLGCS
                     SPKIRRLEHRGRRLTPQKLAG"
     exon            209..1185
                     /gene="DPEP2NB"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1160..1165
                     /regulatory_class="polyA_signal_sequence"
                     /gene="DPEP2NB"
                     /note="hexamer: ATTAAA"
     polyA_site      1185
                     /gene="DPEP2NB"
                     /note="major polyA site"
ORIGIN      
        1 ccttaggtga cttcacaggg tagtgatgac ctcacaagct tccaaagttt ccatggcagc
       61 gtgactacac acctgcgtcc tagagaagcc tccctaccat ttctctgtaa gataccaatc
      121 tgtttggttg gctgagagag aatgactgac cggatcctct atattgtctc taacatgtcc
      181 tctgtcccct gggagggcag cgcagcagct gcagtgcctg ccacttctcc tcccacacct
      241 gggcactacc atgttctcta ccgagggtgt ggagaaactc aggtaggctg gcatggggag
      301 acgtactgcc tggttggtgg ctaccgggtc catggggatg ctcctttggc caccccaaca
      361 aaggctgaag cagagaagcc agcccccagg cgtgctccca agagacgtca agctacgata
      421 gagtcagata aagacctggg ttgctctagc cccaaaattc ggcgcttgga gcatcgtggc
      481 aggagactga ccccacagaa gcttgctggc tgagccattt gggagaaagg acaaatgttt
      541 agctgtctaa gacagctaat gcctcttctg cggtgacctc ccctgcccac cactgcagat
      601 agagcctgag tcattctgcc tatgccttcc tcatccagaa gcccccttcc atgctaacta
      661 cccatggcca aggagcctca gaaactgtgg tttaaaatga gaggttgctt tgaacatccc
      721 aaggctgaag acggcctgga agaaaacctg atgttcctct actcatctct ccagagtccc
      781 tttttgggca gaagatagaa atagtctgca ctctgctagc cgaggagtca agtgcagaga
      841 gggagtgcag catagcccag taagggcttg atctaccaga tgggtctttg ctttgagtca
      901 ctgccagcaa ctaccagcac aaaccaggag ggccaggact tgctgaaact ggaagcagca
      961 gcccatggct agtcacagca ggagaaagcc tcctgcttgg catctcagga ggtagaagaa
     1021 agagacctgg ggagacctgc cacctacagc aagaacaata aggaggaagt tgagcaacat
     1081 ccccctgaag ctcacatgtt actttatttc ctgcccatta tggccccagt gaggtcccta
     1141 ctgctcaatt taaaaaaaaa ttaaaaaaat tatttttcca taaca
//
