LOCUS       XM_047437926            5432 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens CTD phosphatase subunit 1 (CTDP1),
            transcript variant X7, mRNA.
ACCESSION   XM_047437926
VERSION     XM_047437926.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000018.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5432
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="18"
     gene            1..5432
                     /gene="CTDP1"
                     /gene_synonym="CCFDN; FCP1"
                     /note="CTD phosphatase subunit 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     mRNAs, 17 ESTs, 195 long SRA reads, 2 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 9 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:9150"
                     /db_xref="HGNC:HGNC:2498"
                     /db_xref="MIM:604927"
     CDS             16..2478
                     /gene="CTDP1"
                     /gene_synonym="CCFDN; FCP1"
                     /codon_start=1
                     /product="RNA polymerase II subunit A C-terminal domain
                     phosphatase isoform X6"
                     /protein_id="XP_047293882.1"
                     /db_xref="GeneID:9150"
                     /db_xref="HGNC:HGNC:2498"
                     /db_xref="MIM:604927"
                     /translation="MARRPALNAGTRSPAMLCPRCTPGYVVPSAPRPSLGLGDSGPRC
                     MPLLHGAGAPRKSRAVLVRLEGCSHPVVMKGLCAECGQDLTQLQSKNGKQQVPLSTAT
                     VSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNK
                     GIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKK
                     LFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYF
                     QGTGDMNAPPGSRESQTRKKVNHSRGTEVSEPSPPVRDPEGVTQAPGVEPSNGLEKPA
                     RELNGSEAATPRDSPRPGKPDERDIWPPAQAPTSSQELAGAPEPQGSCAQGGRVAPGQ
                     RPAQGATGTDLDFDLSSDSESSSESEGTKSSSSASDGESEGKRGRQKPKAAPEGAGAL
                     AQGSSLEPGRPAAPSLPGEAEPGAHAPDKEPELGGQEEGERDGLCGLGNGCADRKEAE
                     TESQNSELSGVTAGESLDQSMEEEEEEDTDEDDHLIYLEEILVRVHTDYYAKYDRYLN
                     KEIEEAPDIRKIVPELKSKVLADVAIIFSGLHPTNFPIEKTREHYHATALGAKILTRL
                     VLSPDAPDRATHLIAARAGTEKVLQAQECGHLHVVNPDWLWSCLERWDKVEEQLFPLR
                     DDHTKAQRENSPAAFPDREGVPPTALFHPMPVLPKAQPGPEVRIYDSNTGKLIRTGAR
                     GPPAPSSSLPIRQEPSSFRWTTSLEKAATTATARRGGLRSRRRSPSPGSQGPAGSGRS
                     GHLRPARGARQGAGGPEATRGS"
ORIGIN      
        1 gcgcgtgatg gggtaatggc acgcaggcct gcgttgaacg ctgggactcg tagtcccgcc
       61 atgctctgtc cgcggtgcac gccgggatac gtagttccga gcgcgccaag accgtcactg
      121 ggactgggcg acagcggccc gcgttgcatg ccgctgctcc acggtgccgg cgctccgagg
      181 aaaagtagag cggttctggt gaggttggaa ggatgcagcc acccggttgt catgaaaggc
      241 ctgtgtgctg aatgtggcca agacctcacc cagttgcaga gtaagaacgg gaagcagcag
      301 gtgccgctgt ccacggcgac cgtgtccatg gtgcacagcg tgccggagtt gatggtgagc
      361 tccgagcaag ctgaacagct gggaagagaa gaccagcagc gactgcaccg aaaccggaag
      421 ctggtgctca tggtggactt ggaccagacg ttgattcaca caaccgagca gcactgtcag
      481 cagatgtcga ataaaggcat ctttcacttc cagctgggcc ggggtgagcc catgctgcac
      541 acgcgcctgc gtccacactg caaggacttc ctggagaaga tcgccaagct gtacgagctg
      601 cacgtcttca ccttcggcag ccggctgtac gcacacacca tcgcaggctt tttagacccc
      661 gagaagaagc ttttttctca ccgaatatta tcaagggatg aatgtattga cccattttct
      721 aaaacgggaa accttagaaa tctctttcct tgtggagact caatggtttg cattattgat
      781 gatcgagaag atgtctggaa gtttgccccc aatctgataa ctgtgaagaa atatgtatac
      841 ttccagggca cgggtgatat gaatgcgccc cctgggtccc gagaatctca gacgagaaag
      901 aaagtaaatc attctcgagg cactgaggtc tcagagccat ctccgcccgt gagagaccct
      961 gagggggtaa cgcaggcccc tggagtggag cccagcaatg gcctggagaa gcctgcacgg
     1021 gagctgaacg gcagcgaggc cgccaccccg cgggactcac cccgccccgg gaagccagac
     1081 gagagggaca tctggccccc tgcccaggcc cccaccagca gccaagagct ggcaggcgct
     1141 cctgagcccc agggatcctg tgcgcagggt ggccgggtgg caccgggaca gcggcctgcc
     1201 cagggtgcca cgggcactga cctggacttt gacttatcca gcgacagcga gagcagcagt
     1261 gagtccgagg gcacgaagtc ctcctcctcc gcctctgatg gcgaaagcga ggggaaaaga
     1321 ggccggcaga agccgaaggc tgccccagag ggagccgggg cgctggcaca gggcagttcc
     1381 ctggagccgg ggcggcctgc agcaccgagt ctccccggag aggccgagcc tggcgcgcat
     1441 gccccggaca aggagcctga gctgggtggg caggaggagg gcgagcggga tggcctctgc
     1501 ggcctgggca acggctgtgc cgacaggaag gaggcggaga ccgagtcaca gaacagcgag
     1561 ctgtcggggg tcactgcggg tgagtccctg gaccagagca tggaggagga ggaggaggag
     1621 gacacggatg aggatgacca cctcatctac ctggaggaga tcctggtccg tgtacacact
     1681 gactactatg ccaagtatga ccgctacctc aacaaggaga tcgaggaggc gccggacatc
     1741 cgcaagatcg tgccggagct caagagcaag gtgctggcag acgtggccat aattttcagt
     1801 gggctacacc cgacaaactt cccgatagag aagacgcggg agcattacca cgccacggcg
     1861 ctgggagcga agatcctcac tcggctggtg ctgagccccg acgcccctga cagggccacg
     1921 cacctgatcg ccgcgcgagc tggcacagag aaggtgctgc aggcacagga gtgcggacac
     1981 ctgcacgtgg tcaaccctga ctggctgtgg agctgcctgg agcgctggga caaggtggag
     2041 gagcagctct tcccgctcag ggacgatcac accaaggcac agagggagaa cagccctgcg
     2101 gcctttcccg accgggaggg tgtgcccccc accgccttgt tccacccgat gccggttctt
     2161 cccaaggccc agcctggccc cgaggttcgg atctacgact ccaacacggg gaagctcatc
     2221 aggacgggcg cccgggggcc cccagcaccc tccagctccc tacccatccg ccaggagccc
     2281 tcttccttca ggtggacgac atccttggag aaggcagcga cgacagcgac agcgagaaga
     2341 ggaggcctga ggagcaggag gaggagcccc agccccggaa gccagggacc cgcagggagc
     2401 ggacgctcgg ggcacctgcg tccagcgaga ggagcgcggc agggggccgg gggcccagag
     2461 gccacaagag gaagctgaat gaagaggacg ccgccagcga gtccagcagg gagtccagca
     2521 acgaggatga gggcagcagc tccgaggccg acgagatggc caaggcgctg gaggcggagc
     2581 tcaacgacct catgtgagcg cgggcagcgg gcagggactg aagcctgacc gacctccagc
     2641 agcactcgga cgtccccgga ccagccctca gtctcggtcc acgctgcttt cttcccaaag
     2701 gacatgtata tttgcagagc tccacataca gaaacacatt attttgcaga aataggtgtt
     2761 tttaagaagt tttactacag gaatgtctac ttttgtaagt gacaggtgtt aaaggcccag
     2821 gtgtgctgtg ccaaagagct cagcagaggc tcacgtggcc caggctggtg cgcccgctgt
     2881 ctcggtaagg ggcgggttgg tgtgttttcc ccttgtgtac cagagcacat tccttagggg
     2941 acggctttgg gggtcccacg agacatggac taggagttta agcaggacag tgtgcgtgca
     3001 cgagctccga gcccagcaca gacatgcctg gaacccccgc cgcctgctgc tccctcctag
     3061 ggaacccatt tccggggaac gccgtgactg tcgggcagcc tggagcttcc tgcagcctcc
     3121 tacgcagggt ccacgccacg tggcctgggc tgccatcctg ccgtcctccc actggcatcc
     3181 tggcaagggg gcgttgcttt tcctgggcgg ccttttatgt cttggagaca cctgatgtaa
     3241 agtttctgta aatctatttc atatctgacc caccaaacag atttctcttt aataaaaatc
     3301 ctttttgtaa gttctcttct cgtgggtgtg tggcagcggt gagcacccgc ctcctccctc
     3361 gctgggatcc agctccttag ctgtgaaaca gaaacgaaaa aattcccacg gacaggaccg
     3421 tgtggaacgg cagaaatgga aaccgcagaa ctgcgagcgt gatgatctca gggtttcgcc
     3481 tctgagcata agaaccaggc ttgtagctgg tattttaaaa cggttaagtg tgaagaatta
     3541 ctctcttgca ttattttcat ccttcccttt tgtttgtttg ggatgcgggg gcccgagagc
     3601 tacaggtagg tgctgggcta tggccgccgc caggacccct cccggccagc agcctcggct
     3661 cacgtcccct cctcctccca gcatcagtcc cgcagcgtgg cggtgggagg ctgcacctcg
     3721 aggccacggc ccttctccaa aagcacacac tcctgctttc cgacggcacc ctcccctgac
     3781 cacagctcgg gaggtggcac gtgtgagaac tctccatcca caggatgtgg ctctcgcggg
     3841 acctccaggc tcaggctgtc tccgctgggt gtgggacctt tcctgtgggg ttttcgatgg
     3901 aggttggctg gggagggagg catcctcagt gggtagagga ccccagggtc ctggtgctgc
     3961 tgtcgtcaag atgcggcgac atggtggcag aggaaaggca ccgttaccca gcagcacgcc
     4021 agccccgggt gactgtttcc tgtactaact aggttatttg cagcgccgag tgaagaggca
     4081 gcttcaccac ccaacccacc tgtgggttct ccggggtctg cagtctgagg aggctgcagg
     4141 atgaccagac gccggtcagg gagttcctcc tgtccagaga agcaggaggt gaactgggcc
     4201 cacctcaggt ccgatttcgc cacgagcaag aatgtaagat gaattggaca gaaaacaaaa
     4261 atagatgtac aagttgatac ccaaagaaag cagaagattc tacagtttat agggaggggc
     4321 acaaaacgtg cagggagtaa tgtgccgggg ggtgggggca ggggccgatg aacgaggcct
     4381 tgatgctgtg tggagacctc tgggaaaggc tgggagacct tccctccttc cacagtggtt
     4441 tctccctgaa ggcgattctg cgtgtggttg gtcctgctgg gaccaaggtg gccccttgtt
     4501 ctgctcttgg ccgagtcccc tctggcttca tgggggtgtt aatgaggctc tgcaaggcct
     4561 ccttaaacac agtgtggaaa tacaggtggt gctgcagggg cagcgagaac ggggacctct
     4621 gctgctgggt ctggcctagg ggtgaagagg acgggaggag ggtggcgtgg tagctggctg
     4681 cgcggggcct ggtgacggga ggggccggac cgcatgcagc attcaggacc agcgtggccc
     4741 tgggtgttcg cctgttctga ccgtgtggtc gagtgaacag agcatgcagg ggagatgcag
     4801 caggttctcc ccgacgcgga agagcaaggg gtccccggtt cctggaggag cagcgggatt
     4861 gccccaggct ctgggatcgc ccacgggggc agcgggccag cacccccagc cgcatctctg
     4921 cacagccgtg ctgcacacct tctccgtcac gtgttggagg tgggtctcag caccagcaca
     4981 tccacattga tagcttaaaa tgggactttt ctcccgcctg tctcactgtt ggcccgcccc
     5041 catgcagcgg tggggacccc actgcaggga ctccaagagc cccatcctgt cctcggctcc
     5101 agcctccatc agcaccagcc gtgtccttgc agccctgact ggagcaactc ccaaactctg
     5161 ctgcccggca ggtcttctga ccctgcccgc ggtgatggca ccctctggaa ggctggccca
     5221 ggacggcacc tccatgctgg cagcccctga gtgtagtgtg tgttctacac aaaagagcca
     5281 ggaagtcatc tgtgatcatt gtttaaggga ctgtgattaa cgtttatgaa atgttctgtg
     5341 ctatgcgaag aaaccactga atgttaggga aaatattaaa tactgaataa ttatacaact
     5401 gttccaaata aagtcttaag aagaaacttg aa
//
